FFCP PHASE1:Mm9::chr2:32702767..32702778,-: Difference between revisions
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{{FFCP|EntrezGene=20910|HGNC=|MCL_coexpression_id=1|UniProt=O08599|association_with_transcript=-8bp_to_ENSMUST00000050000_5end|description=CAGE_peak_4_at_Stxbp1_5end|id=chr2:32702767..32702778,-|ontology_enrichment_celltype=CL:0000540!3.96e-14!33;CL:0000047!3.96e-14!33;CL:0000031!3.96e-14!33;CL:0000404!3.96e-14!33;CL:0000393!7.88e-14!39;CL:0000211!7.88e-14!39;CL:0002319!1.94e-13!43;CL:0000117!5.52e-13!23;CL:0000337!5.52e-13!23;CL:0000055!6.34e-13!50;CL:0000221!1.36e-12!44;CL:0000133!1.36e-12!44|ontology_enrichment_celltype_v019_2=CL:0000540,1.30e-14,33;CL:0000047,1.30e-14,33;CL:0000031,1.30e-14,33;CL:0000404,1.30e-14,33;CL:0000393,2.66e-14,39;CL:0000211,2.66e-14,39;CL:0002319,8.30e-14,43;CL:0000117,2.01e-13,23;CL:0000337,2.01e-13,23;CL:0000221,5.69e-13,44;CL:0000133,5.69e-13,44;CL:0002321,7.78e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.44e-29!75;UBERON:0001016!1.44e-29!75;UBERON:0001017!4.83e-29!73;UBERON:0005743!4.83e-29!73;UBERON:0002346!1.64e-25!71;UBERON:0003075!1.64e-25!71;UBERON:0007284!1.64e-25!71;UBERON:0004121!1.40e-24!102;UBERON:0000924!1.40e-24!102;UBERON:0006601!1.40e-24!102;UBERON:0001049!3.66e-23!52;UBERON:0005068!3.66e-23!52;UBERON:0006241!3.66e-23!52;UBERON:0007135!3.66e-23!52;UBERON:0000955!3.63e-22!50;UBERON:0006238!3.63e-22!50;UBERON:0000033!5.60e-22!63;UBERON:0002616!1.55e-21!49;UBERON:0003056!3.97e-20!49;UBERON:0002020!1.83e-18!34;UBERON:0003080!2.35e-17!40;UBERON:0002780!9.55e-17!39;UBERON:0001890!9.55e-17!39;UBERON:0006240!9.55e-17!39;UBERON:0002791!9.73e-16!29;UBERON:0003528!9.73e-16!29;UBERON:0001893!9.73e-16!29;UBERON:0000956!1.90e-11!21;UBERON:0001869!1.90e-11!21;UBERON:0000203!1.90e-11!21;UBERON:0007811!7.80e-10!86;UBERON:0000025!1.24e-09!114;UBERON:0002619!1.58e-09!17;UBERON:0000153!1.48e-08!94;UBERON:0004111!1.83e-08!122;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.53e-30,75;UBERON:0001017,5.37e-30,73;UBERON:0002346,4.61e-28,64;UBERON:0003075,4.61e-28,64;UBERON:0007284,4.61e-28,64;UBERON:0004121,3.92e-26,95;UBERON:0000924,3.92e-26,95;UBERON:0006601,3.92e-26,95;UBERON:0000073,3.11e-25,54;UBERON:0001049,6.90e-24,52;UBERON:0005068,6.90e-24,52;UBERON:0006241,6.90e-24,52;UBERON:0007135,6.90e-24,52;UBERON:0010314,2.07e-22,92;UBERON:0010371,1.96e-21,73;UBERON:0003056,7.67e-21,49;UBERON:0000955,9.12e-21,47;UBERON:0006238,9.12e-21,47;UBERON:0002616,3.98e-20,46;UBERON:0002020,4.10e-19,34;UBERON:0003080,5.80e-18,40;UBERON:0002780,2.49e-17,39;UBERON:0001890,2.49e-17,39;UBERON:0006240,2.49e-17,39;UBERON:0003528,2.78e-16,29;UBERON:0002791,2.78e-16,29;UBERON:0001893,2.78e-16,29;UBERON:0000956,7.94e-12,21;UBERON:0001869,7.94e-12,21;UBERON:0000203,7.94e-12,21;UBERON:0000025,6.49e-10,114;UBERON:0002619,7.81e-10,17;UBERON:0004111,1.14e-08,122;UBERON:0002021,6.55e-08,10;UBERON:0000411,6.55e-08,10;UBERON:0001950,6.55e-08,10|phase1_expression=1.12104192973356,1.04692622291808,0.454999239389536,0.30246421130683,0,4.36486106970913,3.50418960893289,0.258246646883153,0.281577444303333,0,0,0,0.342401459862411,0,0.999329285446988,0.809901069559304,0.699561878128147,0.157731082679119,0.274228867211478,0,6.54833334163237,0.397163804803541,0.261199789138935,0.639969691173627,0.68822784320151,0.57423196411502,1.7230479846363,1.29282739611533,0.570070258369122,0.756090389279792,0.665191531965914,4.44521471421742,2.46025915033828,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.52065396829272,2.0190142737785,4.69434806608824,0.65407546914134,2.19686182734472,1.94429899074283,3.49966054063406,1.43752564364972,0.167782606057736,0,0,5.40244815675489,2.86533439938757,2.06268836910977,13.9598357993122,11.1088105647127,17.747279298173,4.06613438482959,3.55717918444456,2.6996991518442,1.97773272513395,0.7104801149461,2.09720077362883,1.15265491596466,7.8804105354443,10.1254453748768,9.04397333810943,23.4233807211119,18.5529574399355,10.2892271340561,9.10531974673246,9.19218786610021,39.6417171597799,28.3465890549117,27.4955694528676,10.1552441552249,15.7358746996145,15.106487746146,46.6235608332306,12.9435400307286,21.697351184307,15.6153150301044,12.5287079103211,12.8615617619457,3.02904773332736,3.09843396437821,3.76823835312181,0.860423876981386,0,0,0,0,0.842666520790511,1.1930122580464,1.29893002301434,1.7666978725517,0.422530259330042,1.28326477414318,2.54805239706646,7.11066703153331,0.432982082022428,0.253359865475099,0,1.82694207550496,1.29468941823586,2.22663208597237,1.38788261412909,1.52232739156071,1.38369298353635,1.80867168663147,1.64624189989987,1.25666591329675,0.247194967734374,1.01219549843938,0,0.808834249737046,1.10420759230197,0.969750506270444,0,32.2058876712702,28.9036455402568,1.78819938646014,0.239630249011841,0,0.762421362438388,27.2618963716777,17.3850229071078,10.5549655774806,35.2863369990321,32.9872939956126,23.6878370797899,21.0913641988085,1.01839363850316,0.995255764880744,1.76905930903572,5.05060454127538,1.69156575851515,3.9083357753690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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20910 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=O08599 | |||
|association_with_transcript=-8bp_to_ENSMUST00000050000_5end | |||
|cluster_id=chr2:32702767..32702778,- | |||
|description=CAGE_peak_4_at_Stxbp1_5end | |||
|id=chr2:32702767..32702778,- | |||
|ontology_enrichment_celltype=CL:0000540!3.96e-14!33;CL:0000047!3.96e-14!33;CL:0000031!3.96e-14!33;CL:0000404!3.96e-14!33;CL:0000393!7.88e-14!39;CL:0000211!7.88e-14!39;CL:0002319!1.94e-13!43;CL:0000117!5.52e-13!23;CL:0000337!5.52e-13!23;CL:0000055!6.34e-13!50;CL:0000221!1.36e-12!44;CL:0000133!1.36e-12!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.30e-14,33;CL:0000047,1.30e-14,33;CL:0000031,1.30e-14,33;CL:0000404,1.30e-14,33;CL:0000393,2.66e-14,39;CL:0000211,2.66e-14,39;CL:0002319,8.30e-14,43;CL:0000117,2.01e-13,23;CL:0000337,2.01e-13,23;CL:0000221,5.69e-13,44;CL:0000133,5.69e-13,44;CL:0002321,7.78e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.44e-29!75;UBERON:0001016!1.44e-29!75;UBERON:0001017!4.83e-29!73;UBERON:0005743!4.83e-29!73;UBERON:0002346!1.64e-25!71;UBERON:0003075!1.64e-25!71;UBERON:0007284!1.64e-25!71;UBERON:0004121!1.40e-24!102;UBERON:0000924!1.40e-24!102;UBERON:0006601!1.40e-24!102;UBERON:0001049!3.66e-23!52;UBERON:0005068!3.66e-23!52;UBERON:0006241!3.66e-23!52;UBERON:0007135!3.66e-23!52;UBERON:0000955!3.63e-22!50;UBERON:0006238!3.63e-22!50;UBERON:0000033!5.60e-22!63;UBERON:0002616!1.55e-21!49;UBERON:0003056!3.97e-20!49;UBERON:0002020!1.83e-18!34;UBERON:0003080!2.35e-17!40;UBERON:0002780!9.55e-17!39;UBERON:0001890!9.55e-17!39;UBERON:0006240!9.55e-17!39;UBERON:0002791!9.73e-16!29;UBERON:0003528!9.73e-16!29;UBERON:0001893!9.73e-16!29;UBERON:0000956!1.90e-11!21;UBERON:0001869!1.90e-11!21;UBERON:0000203!1.90e-11!21;UBERON:0007811!7.80e-10!86;UBERON:0000025!1.24e-09!114;UBERON:0002619!1.58e-09!17;UBERON:0000153!1.48e-08!94;UBERON:0004111!1.83e-08!122;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.53e-30,75;UBERON:0001017,5.37e-30,73;UBERON:0002346,4.61e-28,64;UBERON:0003075,4.61e-28,64;UBERON:0007284,4.61e-28,64;UBERON:0004121,3.92e-26,95;UBERON:0000924,3.92e-26,95;UBERON:0006601,3.92e-26,95;UBERON:0000073,3.11e-25,54;UBERON:0001049,6.90e-24,52;UBERON:0005068,6.90e-24,52;UBERON:0006241,6.90e-24,52;UBERON:0007135,6.90e-24,52;UBERON:0010314,2.07e-22,92;UBERON:0010371,1.96e-21,73;UBERON:0003056,7.67e-21,49;UBERON:0000955,9.12e-21,47;UBERON:0006238,9.12e-21,47;UBERON:0002616,3.98e-20,46;UBERON:0002020,4.10e-19,34;UBERON:0003080,5.80e-18,40;UBERON:0002780,2.49e-17,39;UBERON:0001890,2.49e-17,39;UBERON:0006240,2.49e-17,39;UBERON:0003528,2.78e-16,29;UBERON:0002791,2.78e-16,29;UBERON:0001893,2.78e-16,29;UBERON:0000956,7.94e-12,21;UBERON:0001869,7.94e-12,21;UBERON:0000203,7.94e-12,21;UBERON:0000025,6.49e-10,114;UBERON:0002619,7.81e-10,17;UBERON:0004111,1.14e-08,122;UBERON:0002021,6.55e-08,10;UBERON:0000411,6.55e-08,10;UBERON:0001950,6.55e-08,10 | |||
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| |||
|short_description=p4@Stxbp1 | |||
}} |
Latest revision as of 14:50, 26 September 2015
Short description: | p4@Stxbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Stxbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -8bp_to_ENSMUST00000050000_5end |
EntrezGene: | Stxbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.30e-14 | 33 |
neuronal stem cell | 1.30e-14 | 33 |
neuroblast | 1.30e-14 | 33 |
electrically signaling cell | 1.30e-14 | 33 |
electrically responsive cell | 2.66e-14 | 39 |
electrically active cell | 2.66e-14 | 39 |
neural cell | 8.30e-14 | 43 |
CNS neuron (sensu Vertebrata) | 2.01e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.01e-13 | 23 |
ectodermal cell | 5.69e-13 | 44 |
neurectodermal cell | 5.69e-13 | 44 |
embryonic cell | 7.78e-07 | 70 |