FFCP PHASE1:Mm9::chr1:158488975..158489000,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:158488975..158489000,+
|short_description=p2@Abl2
|description=CAGE_peak_2_at_Abl2_5end
|association_with_transcript=57bp_to_NM_001136104,NM_009595,uc007dc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11352 | |EntrezGene=11352 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=B2RQ57,F8VQH0,Q4JIM5 | |UniProt=B2RQ57,F8VQH0,Q4JIM5 | ||
|association_with_transcript=57bp_to_NM_001136104,NM_009595,uc007dcl.2,uc011wuf.1,uc011wug.1_5end | |||
|cluster_id=chr1:158488975..158489000,+ | |||
|description=CAGE_peak_2_at_Abl2_5end | |||
|id=chr1:158488975..158489000,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.01e-09!23;CL:0000337!1.01e-09!23;CL:0000540!4.57e-07!33;CL:0000047!4.57e-07!33;CL:0000031!4.57e-07!33;CL:0000404!4.57e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.20e-10,23;CL:0000337,1.20e-10,23;CL:0000540,1.88e-07,33;CL:0000047,1.88e-07,33;CL:0000031,1.88e-07,33;CL:0000404,1.88e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!5.98e-18!94;UBERON:0007811!7.52e-18!86;UBERON:0000033!2.10e-13!63;UBERON:0002020!3.59e-12!34;UBERON:0001049!1.08e-11!52;UBERON:0005068!1.08e-11!52;UBERON:0006241!1.08e-11!52;UBERON:0007135!1.08e-11!52;UBERON:0000955!5.76e-11!50;UBERON:0006238!5.76e-11!50;UBERON:0003056!9.48e-11!49;UBERON:0002616!2.22e-10!49;UBERON:0001017!2.93e-10!73;UBERON:0005743!2.93e-10!73;UBERON:0002346!3.44e-10!71;UBERON:0003075!3.44e-10!71;UBERON:0007284!3.44e-10!71;UBERON:0002791!8.19e-10!29;UBERON:0003528!8.19e-10!29;UBERON:0001893!8.19e-10!29;UBERON:0000073!1.54e-09!75;UBERON:0001016!1.54e-09!75;UBERON:0003080!9.78e-09!40;UBERON:0004121!1.39e-08!102;UBERON:0000924!1.39e-08!102;UBERON:0006601!1.39e-08!102;UBERON:0002780!1.86e-08!39;UBERON:0001890!1.86e-08!39;UBERON:0006240!1.86e-08!39;UBERON:0000956!2.57e-07!21;UBERON:0001869!2.57e-07!21;UBERON:0000203!2.57e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.74e-14,64;UBERON:0003075,3.74e-14,64;UBERON:0007284,3.74e-14,64;UBERON:0000073,1.12e-13,54;UBERON:0002020,1.40e-13,34;UBERON:0010371,4.23e-13,73;UBERON:0001049,1.23e-12,52;UBERON:0005068,1.23e-12,52;UBERON:0006241,1.23e-12,52;UBERON:0007135,1.23e-12,52;UBERON:0004121,6.77e-12,95;UBERON:0000924,6.77e-12,95;UBERON:0006601,6.77e-12,95;UBERON:0001017,1.08e-11,73;UBERON:0003056,1.29e-11,49;UBERON:0003528,6.05e-11,29;UBERON:0002791,6.05e-11,29;UBERON:0001893,6.05e-11,29;UBERON:0001016,9.03e-11,75;UBERON:0000955,1.23e-10,47;UBERON:0006238,1.23e-10,47;UBERON:0002616,5.21e-10,46;UBERON:0003080,2.22e-09,40;UBERON:0002780,4.52e-09,39;UBERON:0001890,4.52e-09,39;UBERON:0006240,4.52e-09,39;UBERON:0010314,5.78e-09,92;UBERON:0000956,3.66e-08,21;UBERON:0001869,3.66e-08,21;UBERON:0000203,3.66e-08,21;UBERON:0000153,3.50e-07,43 | |||
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| ||
|short_description=p2@Abl2 | |||
}} | }} |
Latest revision as of 15:03, 26 September 2015
Short description: | p2@Abl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Abl2_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_NM_001136104, NM_009595, uc007dcl.2, uc011wuf.1, uc011wug.1_5end |
EntrezGene: | Abl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.20e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.20e-10 | 23 |
neuron | 1.88e-07 | 33 |
neuronal stem cell | 1.88e-07 | 33 |
neuroblast | 1.88e-07 | 33 |
electrically signaling cell | 1.88e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.74e-14 | 64 |
neural plate | 3.74e-14 | 64 |
presumptive neural plate | 3.74e-14 | 64 |
regional part of nervous system | 1.12e-13 | 54 |
gray matter | 1.40e-13 | 34 |
ecto-epithelium | 4.23e-13 | 73 |
neural tube | 1.23e-12 | 52 |
neural rod | 1.23e-12 | 52 |
future spinal cord | 1.23e-12 | 52 |
neural keel | 1.23e-12 | 52 |
ectoderm-derived structure | 6.77e-12 | 95 |
ectoderm | 6.77e-12 | 95 |
presumptive ectoderm | 6.77e-12 | 95 |
central nervous system | 1.08e-11 | 73 |
pre-chordal neural plate | 1.29e-11 | 49 |
brain grey matter | 6.05e-11 | 29 |
regional part of telencephalon | 6.05e-11 | 29 |
telencephalon | 6.05e-11 | 29 |
nervous system | 9.03e-11 | 75 |
brain | 1.23e-10 | 47 |
future brain | 1.23e-10 | 47 |
regional part of brain | 5.21e-10 | 46 |
anterior neural tube | 2.22e-09 | 40 |
regional part of forebrain | 4.52e-09 | 39 |
forebrain | 4.52e-09 | 39 |
future forebrain | 4.52e-09 | 39 |
structure with developmental contribution from neural crest | 5.78e-09 | 92 |
cerebral cortex | 3.66e-08 | 21 |
cerebral hemisphere | 3.66e-08 | 21 |
pallium | 3.66e-08 | 21 |
anterior region of body | 3.50e-07 | 43 |