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FFCP PHASE1:Mm9::chr7:31936000..31936089,-: Difference between revisions

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(Created page with "{{FFCP |id=chr7:31936000..31936089,- |short_description=p1@Gramd1a |description=CAGE_peak_1_at_Gramd1a_5end |association_with_transcript=0bp_to_ENSMUST00000001280,ENSMUST0...")
 
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{{FFCP
{{FFCP
|id=chr7:31936000..31936089,-
|DHSsupport=NA
|short_description=p1@Gramd1a
|DPIdataset=NA
|description=CAGE_peak_1_at_Gramd1a_5end
|association_with_transcript=0bp_to_ENSMUST00000001280,ENSMUST00000085636,NM_027898,uc009gif.1,uc009gig.1_5end
|EntrezGene=52857
|EntrezGene=52857
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8VEF1,F8WJ74
|UniProt=Q8VEF1,F8WJ74
|association_with_transcript=0bp_to_ENSMUST00000001280,ENSMUST00000085636,NM_027898,uc009gif.1,uc009gig.1_5end
|cluster_id=chr7:31936000..31936089,-
|description=CAGE_peak_1_at_Gramd1a_5end
|id=chr7:31936000..31936089,-
|ontology_enrichment_celltype=CL:0002319!1.40e-16!43;CL:0000221!4.58e-16!44;CL:0000133!4.58e-16!44;CL:0000540!9.81e-16!33;CL:0000047!9.81e-16!33;CL:0000031!9.81e-16!33;CL:0000404!9.81e-16!33;CL:0000055!1.57e-13!50;CL:0000393!4.83e-13!39;CL:0000211!4.83e-13!39;CL:0000117!2.42e-12!23;CL:0000337!2.42e-12!23;CL:0000723!2.80e-11!91;CL:0000048!2.80e-11!91;CL:0000034!2.90e-11!97;CL:0000738!4.56e-08!17;CL:0002087!4.56e-08!17;CL:0000838!1.34e-07!12;CL:0000542!1.47e-07!13;CL:0000051!1.47e-07!13;CL:0000084!2.89e-07!11;CL:0000827!2.89e-07!11
|ontology_enrichment_celltype_v019_2=CL:0002319,1.40e-16,43;CL:0000221,4.58e-16,44;CL:0000133,4.58e-16,44;CL:0000540,9.81e-16,33;CL:0000047,9.81e-16,33;CL:0000031,9.81e-16,33;CL:0000404,9.81e-16,33;CL:0000393,4.83e-13,39;CL:0000211,4.83e-13,39;CL:0000117,2.42e-12,23;CL:0000337,2.42e-12,23;CL:0000723,2.77e-11,91;CL:0000048,2.77e-11,91;CL:0000034,2.87e-11,97;CL:0000738,4.56e-08,17;CL:0002087,4.56e-08,17;CL:0000838,1.34e-07,12;CL:0000542,1.47e-07,13;CL:0000051,1.47e-07,13;CL:0000084,2.89e-07,11;CL:0000827,2.89e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.41e-21,73;UBERON:0001016,5.46e-21,75;UBERON:0004121,7.16e-16,95;UBERON:0000924,7.16e-16,95;UBERON:0006601,7.16e-16,95;UBERON:0002346,4.83e-14,64;UBERON:0003075,4.83e-14,64;UBERON:0007284,4.83e-14,64;UBERON:0000073,4.99e-14,54;UBERON:0001049,3.66e-13,52;UBERON:0005068,3.66e-13,52;UBERON:0006241,3.66e-13,52;UBERON:0007135,3.66e-13,52;UBERON:0002020,6.64e-13,34;UBERON:0000955,5.26e-11,47;UBERON:0006238,5.26e-11,47;UBERON:0002616,7.52e-11,46;UBERON:0003528,1.82e-10,29;UBERON:0002791,1.82e-10,29;UBERON:0001893,1.82e-10,29;UBERON:0010371,2.08e-10,73;UBERON:0003080,3.33e-10,40;UBERON:0002780,5.27e-10,39;UBERON:0001890,5.27e-10,39;UBERON:0006240,5.27e-10,39;UBERON:0003056,8.45e-10,49;UBERON:0010314,6.39e-08,92;UBERON:0000956,3.46e-07,21;UBERON:0001869,3.46e-07,21;UBERON:0000203,3.46e-07,21
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78952263,15.9139928734088,17.5225326137712,16.4906243449939,6.73997861117323,31.6883049674332,6.20062232552609,22.8760315447288,22.3368962117082,28.9732270632631,17.8240556399269,24.1607259451813,23.2367332518593,22.9159717325352,20.7621501962907,20.5346502702105,17.2818003754719,53.0898682655339,24.3270258348197,22.4936996190972,18.9684401547581,27.9281645241271,35.5639625058464,41.2270391853493,42.6822733534528,39.2759490298294,33.9120289614749,44.9684785710309,62.9577909578801,68.6952549311952,71.5286641351202,8.16229381014761,11.3212836220773,6.72853924571068,15.7811539382234,16.8074946808006,22.1465321032395,19.4140721723301,15.6488916727718,51.6619267156424,46.8744029372165,39.5879703396172,37.8111038870002,39.0106723920171,28.773465830367,38.5250887668747,39.1513050134447,37.3766598676103,32.6262534468627,40.385304316642,17.64384908931,34.7151639858897,38.0735940831719,24.0675649897611,17.1882793354945,27.5765262675021,27.5585942474003,28.8449080134452,29.8454864920388,30.8290598351833,26.3618471885849,27.5394458423671,26.8751126438563,33.9973559269856,32.3936044909659,28.1013277857013,41.0230513844788,33.9520228016121,32.5547861634612,25.0238164228475,25.3723246765207,24.6691370561479,26.9432894640473,26.4530478270838,24.3743295275706,29.4458835463034,28.9026197138981,26.0439014323464,28.2472556799393,21.8845485946518,25.5065288966974,31.4229298778047,37.6492559716114,26.3392630016142,23.7275131506804,40.9689347818231,27.6039297965582,20.8424922426849,27.3542314858446,22.2797333310711,17.3900876715316
|phase1_expression=24.6629224541383,0.697950815278722,0,0,0.500895729946347,3.18970616632591,3.03696432774183,101.620055548521,166.975424471877,236.171107058891,42.6332740881507,38.6097249537428,162.469492704714,251.683338564294,18.6541466616771,14.9831697868471,9.79386629379405,55.0481478550125,49.4983105316717,58.1413822963301,24.9176840142634,51.7305855756612,38.9187685817014,5.43974237497583,6.42345986988076,0,0.430761996159075,1.07735616342945,1.52018735565099,3.78045194639896,5.98672378769323,6.35030673459631,6.76571266343027,0,3.46621943701529,4.3221007793208,4.90006455029686,52.3164538421135,42.1921086042852,43.9759944937991,61.1760747552255,66.9384575259277,65.0583873061746,13.8486499773135,19.0588630692687,19.2724089769766,47.7258720052304,31.3956225187843,30.3166932173571,26.2480363750283,34.2966732982138,41.6882436658418,45.1335210295311,158.854309100484,148.217365421827,28.5557973999901,32.951345592957,23.2052441524849,102.372129194956,75.1167190566287,95.7085419294331,30.1571633541528,25.789549087223,51.2942838850397,63.2874472042864,61.1012898853646,48.5352179039816,43.4166685013357,90.9357899945349,92.6140736955398,93.8049327627164,66.5566793660862,48.591079009355,87.7034122379071,88.2736788077957,92.8410974476121,39.6417171597799,39.0723254540674,36.2511418484735,115.53238805165,96.5194640005422,91.159839847433,37.1313388671837,37.1423322620909,45.6866760852662,50.6761167014708,50.2572033220833,90.5901306710961,24.6110128332848,26.2233313570546,42.320215350445,12.9063581547208,6.11974200336975,9.71465744948071,15.5946340187441,9.85659151614138,15.308441794361,9.88495870952735,10.1316541795119,7.0667914902068,21.6898866456088,15.3991772897181,12.7402619853323,21.3320010945999,11.2575341325831,12.4146334082798,12.1325866803548,14.1588010851634,46.6088190564909,22.5632051378534,23.4205191134283,12.7875500891099,24.2146272118861,20.1968338340514,19.2845479702556,19.8553214300887,22.7419370315624,20.8223073964673,40.6920853896942,21.6767578929528,21.6424688091186,14.5462575940567,5.59175283654366,26.6430525280508,29.9508790743241,11.7510245395952,38.2210247173886,33.5945529356308,25.0328347333937,35.6501721783478,37.5150494311274,88.4606638874565,32.3313235557634,33.7544403676036,41.1420328227929,36.17980166411,31.0610059743465,18.785452562124,12.1306924048164,14.3100462002802,22.7710775184731,31.0367840985188,32.0510591053522,34.2099936487073,39.4611695077702,30.7472928683639,38.0429001712499,17.074422468775,24.3591832014112,38.0103221137317,29.5597888595434,35.071317188412,26.970583174883,23.6811473235073,23.2533814140976,29.6561057559555,14.7464769335779,18.5290493122595,23.8697339492298,27.5477277472218,23.9216581180718,22.6878197440879,27.4623893278844,22.8246508826988,18.6663206593728,19.5328513590343,23.8763327245661,25.1045486089414,17.2787842409154,18.7150909050169,15.6462802423502,19.8831982898452,16.2467085315377,17.8494536951294,32.8052319760039,57.2149644828821,10.2429822724977,3.96675849995316,31.7799493297499,23.9203772016252,19.5878541209582,15.5296313959974,10.4517680607089,10.6526350623033,10.4396393539793,4.94096864172033,9.55073793441024,9.94782360205754,11.307917052909,9.88701349519644,8.21324589523838,8.96135729644652,25.605166628666,21.9357144210679,16.9061603509621,17.3103628668517,17.0678188707511,18.936671370386,16.1253169666856,13.727743762103,10.047918581848,11.3525390808056,8.89357881261447,11.8460025058427,7.66580080941492,8.09503604585473,6.08580364165509,9.64708639009667,15.5321769586666,13.5217184601881,12.1601420081277,9.60964946158285,5.75072826109418,14.5134969590716,10.9213185590096,9.85057623993736,9.68746033018326,7.71909634181387,19.7685913478267,26.3393062360974,27.5410810187024,20.0299201214722,22.5302638356962,32.9987327160377,28.3271932654356,33.953254727257,19.8620281573801,18.1601045511995,32.3693180374699,25.8904037250866,25.7300622980184,22.9992003144603,28.6503439484617,30.4587182938477,21.6376280128376,18.4877620024171,29.3807579677659,35.6323527240298,13.7705354116407,14.3908428506493,56.1604630560937,45.6813330827067,46.3160305125518,43.2533524294119,47.9017149277147,55.7660765654,48.9820949026622,48.2222165553665,47.8298211315293,33.7387382242897,26.1169756783214,29.5588902087644,30.1340874804116,27.5500105364134,50.4431525691859,12.867373716214,18.1394134178851,24.7072654480227,31.3020006453619,26.4394227231778,26.6181141963268,23.9932261455154,21.746340081468,31.6036757935816,43.2216295157495,36.0974401368654,28.937366489072,30.790447079354,30.3992906889473,24.8630960636647,25.8916741117719,22.652839835463,24.8469021109203,28.9241701658869,21.8244688499251,24.1488560784755,23.8170669899359,14.6748765117917,16.6308359496783,12.9672788595535,13.7278195603607,16.085808175016,11.0762717919343,27.999220603587,21.1879892189337,35.292154421711,20.7417870654077,12.809055076319,16.403307326523,20.8188137617936,89.5786326067617,80.4720850861033,97.7073814797276,14.3200592702267,27.5212314415588,22.3651413839534,15.768779759983,20.2815647134035,13.538478952263,15.9139928734088,17.5225326137712,16.4906243449939,6.73997861117323,31.6883049674332,6.20062232552609,22.8760315447288,22.3368962117082,28.9732270632631,17.8240556399269,24.1607259451813,23.2367332518593,22.9159717325352,20.7621501962907,20.5346502702105,17.2818003754719,53.0898682655339,24.3270258348197,22.4936996190972,18.9684401547581,27.9281645241271,35.5639625058464,41.2270391853493,42.6822733534528,39.2759490298294,33.9120289614749,44.9684785710309,62.9577909578801,68.6952549311952,71.5286641351202,8.16229381014761,11.3212836220773,6.72853924571068,15.7811539382234,16.8074946808006,22.1465321032395,19.4140721723301,15.6488916727718,51.6619267156424,46.8744029372165,39.5879703396172,37.8111038870002,39.0106723920171,28.773465830367,38.5250887668747,39.1513050134447,37.3766598676103,32.6262534468627,40.385304316642,17.64384908931,34.7151639858897,38.0735940831719,24.0675649897611,17.1882793354945,27.5765262675021,27.5585942474003,28.8449080134452,29.8454864920388,30.8290598351833,26.3618471885849,27.5394458423671,26.8751126438563,33.9973559269856,32.3936044909659,28.1013277857013,41.0230513844788,33.9520228016121,32.5547861634612,25.0238164228475,25.3723246765207,24.6691370561479,26.9432894640473,26.4530478270838,24.3743295275706,29.4458835463034,28.9026197138981,26.0439014323464,28.2472556799393,21.8845485946518,25.5065288966974,31.4229298778047,37.6492559716114,26.3392630016142,23.7275131506804,40.9689347818231,27.6039297965582,20.8424922426849,27.3542314858446,22.2797333310711,17.3900876715316
|short_description=p1@Gramd1a
}}
}}

Latest revision as of 15:48, 26 September 2015

Short description:p1@Gramd1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gramd1a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000001280, ENSMUST00000085636, NM_027898, uc009gif.1, uc009gig.1_5end
EntrezGene:Gramd1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gramd1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9101.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7166.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2236.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E642.63
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F138.61
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4162.47
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8251.68
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.98
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A255.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A449.50
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A658.14
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.92
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H251.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I938.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G852.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H142.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H343.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G961.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H266.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H465.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.85
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.27
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B747.73
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C231.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B830.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C326.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C434.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C441.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A245.13
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9158.85
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1148.22
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C128.56
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E132.95
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C523.21
Mouse Granule cells, donor1.CNhs12131.11713-123C3102.37
Mouse Granule cells, donor2.CNhs12357.11731-123E375.12
Mouse Granule cells, donor3.CNhs12108.11636-122C795.71
Mouse Meningeal cells, donor1.CNhs12132.11716-123C630.16
Mouse Meningeal cells, donor3.CNhs12109.11639-122D125.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C751.29
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E763.29
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D261.10
Mouse Microglia, donor1.CNhs12629.11718-123C848.54
Mouse Microglia, donor2.CNhs12634.11736-123E843.42
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D590.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F592.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D993.80
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F166.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D548.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D287.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F288.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D692.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D339.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F339.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.25
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4115.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F496.52
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D891.16
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E537.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I645.69
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D650.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F650.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E190.59
Mouse Schwann, donor1.CNhs12507.11728-123D924.61
Mouse Schwann, donor2.CNhs12573.11746-123F926.22
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G342.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.26
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.16
accessory axillary lymph node, adult.CNhs10475.1063-29H946.61
adrenal gland, adult.CNhs10508.49-24D722.56
adrenal gland, embryo E14.CNhs11038.406-44C523.42
adrenal gland, embryo E16.CNhs11004.1254-43D612.79
adrenal gland, embryo E17.CNhs11043.1263-45I124.21
adrenal gland, embryo E18.CNhs11026.1262-18F520.20
adrenal gland, neonate N00.CNhs11191.1311-23C119.28
adrenal gland, neonate N25.CNhs11223.1377-27I319.86
amnion, adult pregnant day17.5.CNhs10488.583-22A822.74
aorta, adult.CNhs10498.46-23H120.82
bone (os femoris), adult.CNhs10483.56-12G240.69
bone (os femoris), neonate N02.CNhs11227.1985-43F521.68
bone (os femoris), neonate N16.CNhs11225.1525-43A621.64
bone (os femoris), neonate N20.CNhs11195.1350-25C314.55
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B226.64
cerebellum, neonate N30.CNhs11135.1395-42I229.95
colon, adult.CNhs10468.36-18H711.75
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C738.22
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D133.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D425.03
corpora quadrigemina, adult.CNhs10501.16-22A435.65
corpus striatum, adult.CNhs10487.19-21D837.52
corpus striatum, neonate N00.CNhs11226.630-43F188.46
cortex, adult.CNhs10473.12-14D532.33
cortex, neonate N30.CNhs11107.1392-42F233.75
diencephalon, adult.CNhs10482.20-12F241.14
diencephalon, neonate N30.CNhs11201.1388-42B236.18
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.79
epididymis, adult.CNhs10490.58-23B212.13
eyeball, adult.CNhs10484.31-12G414.31
eyeball, embryo E12.CNhs11016.345-16C622.77
eyeball, embryo E14.CNhs10521.399-16E231.04
eyeball, embryo E15.CNhs10593.426-16C932.05
eyeball, embryo E17.CNhs11023.1261-18D434.21
eyeball, neonate N00.CNhs11207.633-15C639.46
eyeball, neonate N01.CNhs11140.1532-43E730.75
eyeball, neonate N02.CNhs11205.1551-44G838.04
eyeball, neonate N16.CNhs11188.777-19A217.07
forelimb, embryo E11.CNhs10596.335-25E224.36
forelimb, embryo E12.CNhs10600.359-14H238.01
forelimb, embryo E13.CNhs10589.384-1E229.56
forelimb, embryo E14.CNhs10577.413-26A835.07
forelimb, embryo E15.CNhs11007.437-20E726.97
forelimb, embryo E17.CNhs10598.1517-43C423.68
forelimb, embryo E18.CNhs11008.1520-43B523.25
gonad, embryo E13.CNhs11044.1564-45I629.66
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D218.53
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.87
heart, embryo E11.CNhs10586.331-24E927.55
heart, embryo E12.CNhs11015.353-12F523.92
heart, embryo E13.CNhs11013.376-3I922.69
heart, embryo E14.CNhs10597.403-26D427.46
heart, embryo E15.CNhs11017.431-16C822.82
heart, embryo E16.CNhs11021.457-17C618.67
heart, embryo E17.CNhs11025.479-18E519.53
heart, embryo E18.CNhs11030.1283-20G323.88
heart, neonate N00.CNhs11213.639-21E325.10
heart, neonate N03.CNhs11221.1349-25I217.28
heart, neonate N10.CNhs11118.749-24G118.72
heart, neonate N16.CNhs11209.782-15G115.65
heart, neonate N20.CNhs11127.821-26I619.88
heart, neonate N25.CNhs11196.1351-25D316.25
heart, neonate N30.CNhs11202.1390-42D217.85
hippocampus, adult.CNhs10478.13-16E832.81
hippocampus, neonate N00.CNhs11228.627-43G157.21
intestinal mucosa, adult.CNhs10506.860-29I310.24
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I531.78
intestine, embryo E13.CNhs11010.381-16D523.92
intestine, embryo E15.CNhs10602.976-16D819.59
intestine, embryo E16.CNhs10585.463-22H415.53
intestine, embryo E17.CNhs10582.482-18D310.45
intestine, embryo E18.CNhs10526.1289-20F710.65
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E94.94
intestine, neonate N06.CNhs11102.688-20B89.55
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A511.31
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E38.21
intestine, neonate N30.CNhs11131.1384-42G18.96
kidney, embryo E14.CNhs10606.411-4I925.61
kidney, embryo E15.CNhs10997.434-16F821.94
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I217.31
kidney, embryo E18.CNhs11001.1288-20C717.07
kidney, neonate N00.CNhs11214.646-21G718.94
kidney, neonate N10.CNhs11206.758-6D516.13
kidney, neonate N20.CNhs11113.832-19I113.73
kidney, neonate N25.CNhs11122.1353-25F310.05
kidney, neonate N30.CNhs11203.1385-42H111.35
liver, adult pregnant day01.CNhs10466.508-5B28.89
liver, embryo E12.CNhs10601.355-15F811.85
liver, embryo E13.CNhs10524.378-3H67.67
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D76.09
liver, embryo E16.CNhs10523.462-17F59.65
liver, embryo E17.CNhs10510.481-18A315.53
liver, embryo E18.CNhs10579.499-43G413.52
liver, neonate N00.CNhs11117.641-24F412.16
liver, neonate N03.CNhs11123.1345-25G29.61
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H214.51
liver, neonate N10.CNhs11115.751-24B910.92
liver, neonate N20.CNhs11220.823-25A39.85
liver, neonate N25.CNhs11198.1368-26H19.69
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B119.77
lung, embryo E12.CNhs10522.354-16G226.34
lung, embryo E14.CNhs10604.404-26F827.54
lung, embryo E15.CNhs11020.432-17C520.03
lung, embryo E16.CNhs10998.458-17B622.53
lung, embryo E17.CNhs10605.480-44A633.00
lung, embryo E18.CNhs10583.1287-20I628.33
lung, neonate N00.CNhs11224.640-42C633.95
lung, neonate N06.CNhs11212.683-20E519.86
lung, neonate N07.CNhs11111.715-19A318.16
lung, neonate N10.CNhs11219.750-23E632.37
lung, neonate N20.CNhs11109.822-18A425.89
lung, neonate N25.CNhs11119.1359-25C725.73
lung, neonate N30.CNhs11133.1394-42H223.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A128.65
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A130.46
mammary gland, adult lactating day02.CNhs10480.595-22B621.64
mammary gland, adult pregnant day19.CNhs10476.588-5H218.49
medulla oblongata, adult.CNhs10477.17-12C229.38
medulla oblongata, neonate N30.CNhs11200.1396-42A335.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.39
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E156.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E245.68
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E346.32
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D743.25
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D847.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D955.77
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D448.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D548.22
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D647.83
olfactory brain, adult.CNhs10489.18-22I933.74
ovary, adult.CNhs10507.91-2I726.12
ovary, embryo E18.CNhs11040.505-44H729.56
ovary, neonate N00.CNhs11217.1299-22I430.13
oviduct, adult pregnant day01.CNhs10500.988-6G627.55
pancreas, adult.CNhs10486.34-16E450.44
pancreas, embryo E14.CNhs11012.405-44F412.87
pancreas, embryo E15.CNhs11042.1556-45F218.14
pancreas, embryo E16.CNhs11003.460-26E524.71
pancreas, embryo E17.CNhs10599.1558-45G331.30
pancreas, embryo E18.CNhs10580.1535-43I726.44
pancreas, neonate N00.CNhs11105.645-26G926.62
pancreas, neonate N01.CNhs11138.1531-43D723.99
pancreas, neonate N02.CNhs11139.1539-43D821.75
pancreas, neonate N16.CNhs11136.787-43B631.60
pancreas, neonate N25.CNhs11094.1555-45E243.22
pancreas, neonate N30.CNhs11182.1548-44H536.10
pituitary gland, adult.CNhs10493.21-1G828.94
pituitary gland, embryo E12.CNhs11018.346-16E630.79
pituitary gland, embryo E13.CNhs11009.370-44C730.40
pituitary gland, embryo E14.CNhs11037.398-44A524.86
pituitary gland, embryo E15.CNhs10592.427-16B925.89
pituitary gland, embryo E16.CNhs11036.449-43F622.65
pituitary gland, embryo E17.CNhs11039.1265-44F524.85
pituitary gland, neonate N00.CNhs11190.1308-22E928.92
placenta, adult pregnant day10.CNhs10472.539-13I721.82
placenta, adult pregnant day17.CNhs10464.577-18G324.15
prostate, adult.CNhs10470.859-1F823.82
skin, adult.CNhs10492.30-1C314.67
skin, neonate N00.CNhs11124.650-25G416.63
skin, neonate N03.CNhs11215.662-22H312.97
skin, neonate N06.CNhs11097.693-20I513.73
skin, neonate N10.CNhs11108.762-6C416.09
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C928.00
spleen, adult.CNhs10465.25-2G221.19
spleen, embryo E16.CNhs11035.461-43C135.29
spleen, embryo E18.CNhs11011.1271-21F220.74
spleen, neonate N10.CNhs11116.752-24D112.81
spleen, neonate N20.CNhs11112.824-19H116.40
spleen, neonate N25.CNhs11099.1354-25G320.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C689.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C980.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D397.71
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E327.52
stomach, embryo E15.CNhs10603.1252-16G822.37
stomach, embryo E16.CNhs11022.459-17D415.77
stomach, embryo E17.CNhs11006.1035-18D520.28
stomach, embryo E18.CNhs10999.1286-20C613.54
stomach, neonate N03.CNhs11193.1340-24B815.91
stomach, neonate N07.CNhs11210.718-18A917.52
stomach, neonate N25.CNhs11104.1355-25E416.49
stomach, neonate N30.CNhs11134.1386-42I16.74
submandibular gland, adult.CNhs10469.59-29C131.69
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F522.88
testis, embryo E15.CNhs11034.443-27C522.34
testis, embryo E16.CNhs11033.470-26G528.97
testis, embryo E17.CNhs11029.486-18I517.82
testis, embryo E18.CNhs11027.503-18G524.16
testis, neonate N00.CNhs11189.1300-22B723.24
testis, neonate N07.CNhs11222.726-26I422.92
testis, neonate N10.CNhs11204.763-44D920.76
testis, neonate N20.CNhs11110.839-18H320.53
testis, neonate N30.CNhs11130.1391-42E217.28
thymus, adult.CNhs10471.38-12B553.09
thymus, embryo E14.CNhs11041.402-44I424.33
thymus, embryo E15.CNhs11005.430-45I222.49
thymus, embryo E16.CNhs11002.456-26C518.97
thymus, embryo E17.CNhs10581.478-18C127.93
thymus, embryo E18.CNhs10595.1273-19G435.56
thymus, neonate N02.CNhs11181.1541-43F841.23
thymus, neonate N03.CNhs11137.2104-43C742.68
thymus, neonate N06.CNhs11197.681-26C439.28
thymus, neonate N07.CNhs11211.713-19D333.91
thymus, neonate N10.CNhs11194.748-24E444.97
thymus, neonate N20.CNhs11186.820-7A262.96
thymus, neonate N25.CNhs11125.1362-25G768.70
thymus, neonate N30.CNhs11132.1393-42G271.53
tongue, adult.CNhs10499.32-1B48.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.73
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.78
urinary bladder, adult.CNhs10481.879-12E416.81
uterus, adult pregnant day19.CNhs10497.590-15F522.15
uterus, adult.CNhs10509.92-27E519.41
vagina, adult.CNhs10502.89-27D515.65
vesicular gland, adult.CNhs10491.51-27F851.66
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A146.87
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A239.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D739.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A538.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A737.38
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A832.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A940.39
whole body, embryo E11.CNhs11014.324-5I817.64
whole body, embryo E12.CNhs10587.857-27C934.72
whole body, embryo E13.CNhs10512.372-23H238.07
whole body, embryo E14.5.CNhs10578.420-27D224.07
whole body, embryo E14.CNhs10519.395-14B117.19
whole body, embryo E16.CNhs10514.453-14F227.58
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.84
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G529.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G530.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G527.54
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.88
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G534.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G532.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G541.02
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G533.95
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G525.02
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G524.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G526.94
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G526.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.37
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.90
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.04
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G528.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.88
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G531.42
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G537.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.34
whole body, embryo E17.5.CNhs10513.490-9F923.73
whole body, embryo E17.CNhs10517.475-3I540.97
whole body, embryo E18.CNhs10516.493-3B327.60
whole body, neonate N00.CNhs10525.657-19C220.84
whole body, neonate N01.CNhs10576.659-23C627.35
whole body, neonate N06.CNhs10515.692-21D122.28
whole body, neonate N10.CNhs10518.761-6B417.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.41e-2173
nervous system5.46e-2175
ectoderm-derived structure7.16e-1695
ectoderm7.16e-1695
presumptive ectoderm7.16e-1695
neurectoderm4.83e-1464
neural plate4.83e-1464
presumptive neural plate4.83e-1464
regional part of nervous system4.99e-1454
neural tube3.66e-1352
neural rod3.66e-1352
future spinal cord3.66e-1352
neural keel3.66e-1352
gray matter6.64e-1334
brain5.26e-1147
future brain5.26e-1147
regional part of brain7.52e-1146
brain grey matter1.82e-1029
regional part of telencephalon1.82e-1029
telencephalon1.82e-1029
ecto-epithelium2.08e-1073
anterior neural tube3.33e-1040
regional part of forebrain5.27e-1039
forebrain5.27e-1039
future forebrain5.27e-1039
pre-chordal neural plate8.45e-1049
structure with developmental contribution from neural crest6.39e-0892
cerebral cortex3.46e-0721
cerebral hemisphere3.46e-0721
pallium3.46e-0721
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