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FFCP PHASE1:Mm9::chr9:41932236..41932247,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:41932236..41932247,-
|DHSsupport=NA
|short_description=p3@Sorl1
|DPIdataset=NA
|description=CAGE_peak_3_at_Sorl1_5end
|association_with_transcript=124bp_to_NM_011436,uc009pap.1_5end
|EntrezGene=20660
|EntrezGene=20660
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=O88307
|UniProt=O88307
|association_with_transcript=124bp_to_NM_011436,uc009pap.1_5end
|cluster_id=chr9:41932236..41932247,-
|description=CAGE_peak_3_at_Sorl1_5end
|id=chr9:41932236..41932247,-
|ontology_enrichment_celltype=CL:0000117!1.71e-07!23;CL:0000337!1.71e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.33e-08,23;CL:0000337,3.33e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!9.98e-19!52;UBERON:0005068!9.98e-19!52;UBERON:0006241!9.98e-19!52;UBERON:0007135!9.98e-19!52;UBERON:0000955!3.83e-18!50;UBERON:0006238!3.83e-18!50;UBERON:0001017!8.21e-18!73;UBERON:0005743!8.21e-18!73;UBERON:0002616!1.51e-17!49;UBERON:0000073!9.78e-17!75;UBERON:0001016!9.78e-17!75;UBERON:0000033!5.36e-16!63;UBERON:0002346!2.54e-15!71;UBERON:0003075!2.54e-15!71;UBERON:0007284!2.54e-15!71;UBERON:0004121!4.13e-14!102;UBERON:0000924!4.13e-14!102;UBERON:0006601!4.13e-14!102;UBERON:0003080!2.49e-13!40;UBERON:0002020!2.97e-13!34;UBERON:0002780!9.14e-13!39;UBERON:0001890!9.14e-13!39;UBERON:0006240!9.14e-13!39;UBERON:0003056!1.05e-12!49;UBERON:0002791!4.77e-11!29;UBERON:0003528!4.77e-11!29;UBERON:0001893!4.77e-11!29;UBERON:0000956!2.58e-10!21;UBERON:0001869!2.58e-10!21;UBERON:0000203!2.58e-10!21;UBERON:0007811!1.02e-09!86;UBERON:0002619!7.21e-09!17;UBERON:0000153!8.17e-09!94;UBERON:0002021!4.88e-08!10;UBERON:0000411!4.88e-08!10;UBERON:0001950!4.88e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.18e-30,54;UBERON:0001017,7.43e-28,73;UBERON:0001049,1.55e-27,52;UBERON:0005068,1.55e-27,52;UBERON:0006241,1.55e-27,52;UBERON:0007135,1.55e-27,52;UBERON:0001016,8.95e-27,75;UBERON:0000955,4.63e-24,47;UBERON:0006238,4.63e-24,47;UBERON:0002346,2.69e-23,64;UBERON:0003075,2.69e-23,64;UBERON:0007284,2.69e-23,64;UBERON:0002616,6.30e-23,46;UBERON:0004121,6.73e-21,95;UBERON:0000924,6.73e-21,95;UBERON:0006601,6.73e-21,95;UBERON:0010371,4.69e-19,73;UBERON:0002020,9.92e-18,34;UBERON:0003080,1.76e-17,40;UBERON:0002780,2.01e-16,39;UBERON:0001890,2.01e-16,39;UBERON:0006240,2.01e-16,39;UBERON:0002021,1.58e-15,10;UBERON:0000411,1.58e-15,10;UBERON:0001950,1.58e-15,10;UBERON:0003056,1.76e-15,49;UBERON:0003528,9.25e-15,29;UBERON:0002791,9.25e-15,29;UBERON:0001893,9.25e-15,29;UBERON:0000956,2.51e-13,21;UBERON:0001869,2.51e-13,21;UBERON:0000203,2.51e-13,21;UBERON:0010314,6.76e-13,92;UBERON:0002619,1.46e-11,17;UBERON:0003076,4.97e-11,12;UBERON:0003057,4.97e-11,12;UBERON:0004111,2.19e-10,122;UBERON:0000025,2.42e-10,114;UBERON:0011216,2.38e-07,194;UBERON:0004733,5.49e-07,6;UBERON:0004732,5.49e-07,6;UBERON:0002028,5.49e-07,6;UBERON:0007277,5.49e-07,6
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0.258246646883153,0,0,0,0,0.171200729931206,0.611942816932982,0.333109761815663,0,0,0.473193248037357,1.23402990245165,1.27316895539409,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,1.22501613757421,2.92972141515835,0.7813353445238,1.0470474879476,1.76469446409304,2.73218193983378,1.94204141212461,0,0,0,0,3.2703773457067,0.878744730937887,2.13872888981712,0.699932108126813,0,0.671130424230945,0,0,0,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0.449949858640699,0,0.7104801149461,1.49800055259202,3.45796474789399,1.03689612308478,0.675029691658453,1.05162480675691,1.99955689082663,1.32521124570968,0.367472397644862,0.479227355091182,0.919218786610021,7.70811166995721,3.70293280447044,6.14426133024974,0.263772575460388,0.365950574409639,0,8.65467296904281,2.8138130501584,3.97275444219706,1.76777151284201,2.27794689278565,0.931997229126503,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.29688427812965,0,0,0,0.301445281105245,0.23517741427141,0.879666139307728,0,0.86759614151947,0,0,0.441683036920787,0,0,14.3462590535658,17.1746299587033,0.510914110417183,0,0,0,4.19413790333504,5.03250663100489,0.376963056338593,6.60532416730651,5.11430914660661,4.57133698031032,5.67844420737152,0.203678727700633,0.373220911830279,0.758168275301024,2.73574412652416,0.390361328888111,0.229902104433473,0.360124259610698,0,0.272145996605311,0.512454881139399,0.187403449119458,2.06962696591213,0,0.189106080167819,0.527853372491847,0,0.278047249225598,0.696504333044333,0,0,0,0,0.284163499395593,0.621377317606506,0.234526059981096,0.540186184383045,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0,0,0.162137619091711,0.438599962275997,0,0,6.30869845692382,0.308713837137853,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0.667134131534611,0.570676878337677,1.42358718463353,0.494096864172033,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.814605311381257,0.387904974335251,0.49095073923223,0.505892296994058,1.62371162777562,2.82597710114475,1.48076596706161,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0.739012760666419,0.757965647081939,0.325929952884052,0.509235257325564,0.938760993154008,0.670025029767263,1.6663054862021,1.56106918286239,0.945810864637146,0.664394068946325,1.11618338060241,0.491589944147214,1.20879487306127,1.15719246865209,0,0,0.491764273019036,0.551873492609465,6.90367536947505,6.91548950893999,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0.404810701674894,0,0,3.85585579706168,0,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0,0.727067458955011,1.06949213515416,0.316036757935816,0,0,3.40439605753788,0.36012218806262,0.258717367565509,0.214337035031592,0.177340233642274,1.60531935841864,0.987294123612726,1.522324745573,0,0,1.32317038832977,0.32977250588296,0.807322133479528,0.180938774784468,0.119372344003136,0.492422699235184,0,10.0129663085675,0.341741761595705,0.412773735926445,0.370389054739423,0,0,0.457556346413045,0,0.139951452323658,0.138199973804424,0.954670618015114,0.316335993581135,0.203319467126849,0.432021363287205,0.627264888043406,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,0.90730481304255,0,0,0,0.165458490457098,0,0.774958940866387,0.337912250981556,0.58678619322877,0.2604087696879,0.209718688851422,0.483168241652012,0,0.632022241256357,0.608175645870493,0.513554785824136,0.129920822977795,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0.0974578807397524,0.288635524920988,0.350630706544707,0.226730383615211,1.10992976687032,0.269141569828427,0.335769232728157,2.12508553435409,0.375364950902364,0.183151624267265,0,0,6.7770221114048,7.36520378411483,4.58316410751517,5.499301834998,9.59115527678899,6.7985450765073,7.42524750254986,8.55610286126019,8.60970577069989,7.7664046762773,0,0,0.512200817262403,0.486213434136588,0,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.287177344778066,0,0,0.192909220463705,0.824171801606613,0.294397840268795,0,0.532427418478012,0.476872379894642,0.581385666529314,0.282328141245992,0.338458431566706,0,0,0.543216455383447,0.561142271657738,0.355905054372522,0.394017929502254,0.818462086339379,0,0.192906610981141,0.499621155875892,0.701794825336225,0.214871054048298,0,0.882365676478062,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0.258246646883153,0,0,0,0,0.171200729931206,0.611942816932982,0.333109761815663,0,0,0.473193248037357,1.23402990245165,1.27316895539409,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,1.22501613757421,2.92972141515835,0.7813353445238,1.0470474879476,1.76469446409304,2.73218193983378,1.94204141212461,0,0,0,0,3.2703773457067,0.878744730937887,2.13872888981712,0.699932108126813,0,0.671130424230945,0,0,0,0,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0.449949858640699,0,0.7104801149461,1.49800055259202,3.45796474789399,1.03689612308478,0.675029691658453,1.05162480675691,1.99955689082663,1.32521124570968,0.367472397644862,0.479227355091182,0.919218786610021,7.70811166995721,3.70293280447044,6.14426133024974,0.263772575460388,0.365950574409639,0,8.65467296904281,2.8138130501584,3.97275444219706,1.76777151284201,2.27794689278565,0.931997229126503,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.29688427812965,0,0,0,0.301445281105245,0.23517741427141,0.879666139307728,0,0.86759614151947,0,0,0.441683036920787,0,0,14.3462590535658,17.1746299587033,0.510914110417183,0,0,0,4.19413790333504,5.03250663100489,0.376963056338593,6.60532416730651,5.11430914660661,4.57133698031032,5.67844420737152,0.203678727700633,0.373220911830279,0.758168275301024,2.73574412652416,0.390361328888111,0.229902104433473,0.360124259610698,0,0.272145996605311,0.512454881139399,0.187403449119458,2.06962696591213,0,0.189106080167819,0.527853372491847,0,0.278047249225598,0.696504333044333,0,0,0,0,0.284163499395593,0.621377317606506,0.234526059981096,0.540186184383045,0.473489471170421,0,0.154267112887378,0,0,0.116765342367169,0,0,0.162137619091711,0.438599962275997,0,0,6.30869845692382,0.308713837137853,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0.667134131534611,0.570676878337677,1.42358718463353,0.494096864172033,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.814605311381257,0.387904974335251,0.49095073923223,0.505892296994058,1.62371162777562,2.82597710114475,1.48076596706161,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0.739012760666419,0.757965647081939,0.325929952884052,0.509235257325564,0.938760993154008,0.670025029767263,1.6663054862021,1.56106918286239,0.945810864637146,0.664394068946325,1.11618338060241,0.491589944147214,1.20879487306127,1.15719246865209,0,0,0.491764273019036,0.551873492609465,6.90367536947505,6.91548950893999,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0.404810701674894,0,0,3.85585579706168,0,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0,0.727067458955011,1.06949213515416,0.316036757935816,0,0,3.40439605753788,0.36012218806262,0.258717367565509,0.214337035031592,0.177340233642274,1.60531935841864,0.987294123612726,1.522324745573,0,0,1.32317038832977,0.32977250588296,0.807322133479528,0.180938774784468,0.119372344003136,0.492422699235184,0,10.0129663085675,0.341741761595705,0.412773735926445,0.370389054739423,0,0,0.457556346413045,0,0.139951452323658,0.138199973804424,0.954670618015114,0.316335993581135,0.203319467126849,0.432021363287205,0.627264888043406,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,0.90730481304255,0,0,0,0.165458490457098,0,0.774958940866387,0.337912250981556,0.58678619322877,0.2604087696879,0.209718688851422,0.483168241652012,0,0.632022241256357,0.608175645870493,0.513554785824136,0.129920822977795,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0.0974578807397524,0.288635524920988,0.350630706544707,0.226730383615211,1.10992976687032,0.269141569828427,0.335769232728157,2.12508553435409,0.375364950902364,0.183151624267265,0,0,6.7770221114048,7.36520378411483,4.58316410751517,5.499301834998,9.59115527678899,6.7985450765073,7.42524750254986,8.55610286126019,8.60970577069989,7.7664046762773,0,0,0.512200817262403,0.486213434136588,0,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.287177344778066,0,0,0.192909220463705,0.824171801606613,0.294397840268795,0,0.532427418478012,0.476872379894642,0.581385666529314,0.282328141245992,0.338458431566706,0,0,0.543216455383447,0.561142271657738,0.355905054372522,0.394017929502254,0.818462086339379,0,0.192906610981141,0.499621155875892,0.701794825336225,0.214871054048298,0,0.882365676478062,0.463735671240843
|short_description=p3@Sorl1
}}
}}

Latest revision as of 15:51, 26 September 2015

Short description:p3@Sorl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Sorl1_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 124bp_to_NM_011436, uc009pap.1_5end
EntrezGene:Sorl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Sorl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.65
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.35
cerebellum, neonate N30.CNhs11135.1395-42I217.17
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A36.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.01
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.33e-0823
neuroblast (sensu Vertebrata)3.33e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.18e-3054
central nervous system7.43e-2873
neural tube1.55e-2752
neural rod1.55e-2752
future spinal cord1.55e-2752
neural keel1.55e-2752
nervous system8.95e-2775
brain4.63e-2447
future brain4.63e-2447
neurectoderm2.69e-2364
neural plate2.69e-2364
presumptive neural plate2.69e-2364
regional part of brain6.30e-2346
ectoderm-derived structure6.73e-2195
ectoderm6.73e-2195
presumptive ectoderm6.73e-2195
ecto-epithelium4.69e-1973
gray matter9.92e-1834
anterior neural tube1.76e-1740
regional part of forebrain2.01e-1639
forebrain2.01e-1639
future forebrain2.01e-1639
occipital lobe1.58e-1510
visual cortex1.58e-1510
neocortex1.58e-1510
pre-chordal neural plate1.76e-1549
brain grey matter9.25e-1529
regional part of telencephalon9.25e-1529
telencephalon9.25e-1529
cerebral cortex2.51e-1321
cerebral hemisphere2.51e-1321
pallium2.51e-1321
structure with developmental contribution from neural crest6.76e-1392
regional part of cerebral cortex1.46e-1117
posterior neural tube4.97e-1112
chordal neural plate4.97e-1112
anatomical conduit2.19e-10122
tube2.42e-10114
organ system subdivision2.38e-07194
segmental subdivision of hindbrain5.49e-076
segmental subdivision of nervous system5.49e-076
hindbrain5.49e-076
presumptive hindbrain5.49e-076
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