FFCP PHASE1:Mm9::chr7:35090505..35090516,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:35090505..35090516,- to FFCP PHASE1:Mm9::chr7:35090505..35090516,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=233103 | |EntrezGene=233103 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENSMUST00000146025_5end | |||
|cluster_id=chr7:35090505..35090516,- | |||
|description=CAGE_peak_7_at_4931406P16Rik_5end | |||
|id=chr7:35090505..35090516,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0000215,3.18e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!4.11e-10!66;UBERON:0000077!9.42e-10!97;UBERON:0001041!4.53e-08!92;UBERON:0005172!3.73e-07!49;UBERON:0005173!3.73e-07!49;UBERON:0002417!3.73e-07!49;UBERON:0000916!3.73e-07!49;UBERON:0002365!4.27e-07!25;UBERON:0002330!4.27e-07!25;UBERON:0005177!5.40e-07!85;UBERON:0004119!7.84e-07!130;UBERON:0000925!7.84e-07!130;UBERON:0006595!7.84e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1;UBERON:0001987,5.06e-10,2;UBERON:0003124,5.06e-10,2;UBERON:0004340,5.06e-10,2;UBERON:0002107,5.70e-08,22;UBERON:0007499,5.70e-08,22;UBERON:0006925,5.70e-08,22;UBERON:0009497,5.70e-08,22;UBERON:0000015,5.70e-08,22;UBERON:0002423,5.70e-08,22;UBERON:0006235,5.70e-08,22;UBERON:0008835,5.70e-08,22;UBERON:0003894,5.70e-08,22;UBERON:0004161,5.70e-08,22;UBERON:0008836,5.70e-08,22;UBERON:0009854,1.18e-07,23;UBERON:0009856,1.18e-07,23;UBERON:0005631,4.17e-07,3;UBERON:0000478,4.17e-07,3;UBERON:0000158,4.17e-07,3;UBERON:0002365,4.23e-07,25;UBERON:0002330,4.23e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4932244350839,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.841767423545896,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0.493588655687202,0.592905254174298,0.333690211432188,0.786235980452812,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0,1.43768206527355,1.11642284300551,0,0.505157755894224,0.538192240565737,0.964887042726734,0.369506380333209,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,0,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,1.17335854031855,0.63549621259146,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0.170870880797853,1.03193433981611,0.925972636848558,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.563047426353546,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0.441596760403192,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0,0.818462086339379,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4932244350839,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.841767423545896,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0.493588655687202,0.592905254174298,0.333690211432188,0.786235980452812,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0,1.43768206527355,1.11642284300551,0,0.505157755894224,0.538192240565737,0.964887042726734,0.369506380333209,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.327726629431476,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,0,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,1.17335854031855,0.63549621259146,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0.170870880797853,1.03193433981611,0.925972636848558,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.563047426353546,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0.441596760403192,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0,0.818462086339379,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p7@4931406P16Rik | |||
}} | }} |
Latest revision as of 16:34, 26 September 2015
Short description: | p7@4931406P16Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_4931406P16Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | 14bp_to_ENSMUST00000146025_5end |
EntrezGene: | 4931406P16Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 5.15e-19 | 1 |
meso-epithelial cell | 5.15e-19 | 1 |
endothelial cell | 5.15e-19 | 1 |
endothelial cell of sinusoid | 5.15e-19 | 1 |
endothelial cell of hepatic sinusoid | 5.15e-19 | 1 |
barrier cell | 3.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.15e-19 | 1 |
hepatic sinusoid | 5.15e-19 | 1 |
parenchyma | 5.15e-19 | 1 |
abdomen blood vessel | 5.15e-19 | 1 |
sinusoid | 5.15e-19 | 1 |
digestive system duct | 5.15e-19 | 1 |
abdominal segment blood vessel | 5.15e-19 | 1 |
trunk blood vessel | 5.15e-19 | 1 |
liver parenchyma | 5.15e-19 | 1 |
liver lobule | 5.15e-19 | 1 |
biliary system | 5.15e-19 | 1 |
biliary tree | 5.15e-19 | 1 |
biliary bud | 5.15e-19 | 1 |
hepatic duct | 5.15e-19 | 1 |
placenta | 5.06e-10 | 2 |
chorion | 5.06e-10 | 2 |
allantois | 5.06e-10 | 2 |
liver | 5.70e-08 | 22 |
epithelial sac | 5.70e-08 | 22 |
digestive gland | 5.70e-08 | 22 |
epithelium of foregut-midgut junction | 5.70e-08 | 22 |
anatomical boundary | 5.70e-08 | 22 |
hepatobiliary system | 5.70e-08 | 22 |
foregut-midgut junction | 5.70e-08 | 22 |
hepatic diverticulum | 5.70e-08 | 22 |
liver primordium | 5.70e-08 | 22 |
septum transversum | 5.70e-08 | 22 |
liver bud | 5.70e-08 | 22 |
digestive tract diverticulum | 1.18e-07 | 23 |
sac | 1.18e-07 | 23 |
extraembryonic membrane | 4.17e-07 | 3 |
extraembryonic structure | 4.17e-07 | 3 |
membranous layer | 4.17e-07 | 3 |
exocrine gland | 4.23e-07 | 25 |
exocrine system | 4.23e-07 | 25 |