Personal tools

FFCP PHASE1:Mm9::chr1:16678540..16678552,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17087
|EntrezGene=17087
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9JHF9,Q64HC9,Q14AM4
|UniProt=Q9JHF9,Q64HC9,Q14AM4
|association_with_transcript=3bp_to_ENSMUST00000026881,NM_001159711,NM_016923,uc007ajz.2,uc011wim.1_5end
|association_with_transcript=3bp_to_ENSMUST00000026881,NM_001159711,NM_016923,uc007ajz.2,uc011wim.1_5end
|cluster_id=chr1:16678540..16678552,+
|description=CAGE_peak_2_at_Ly96_5end
|description=CAGE_peak_2_at_Ly96_5end
|id=chr1:16678540..16678552,+
|id=chr1:16678540..16678552,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!2.84e-10!193;UBERON:0004120!2.84e-10!193;UBERON:0006603!2.84e-10!193;UBERON:0005256!3.15e-09!47;UBERON:0009569!3.73e-08!66;UBERON:0002100!1.19e-07!98;UBERON:0005172!3.28e-07!49;UBERON:0005173!3.28e-07!49;UBERON:0002417!3.28e-07!49;UBERON:0000916!3.28e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0005256,4.51e-10,45;UBERON:0002100,2.68e-09,90;UBERON:0003104,5.29e-09,61;UBERON:0009142,5.29e-09,61;UBERON:0009569,4.88e-07,66
|phase1_expression=1.60148847104794,5.58360652222978,5.0049916332849,0,0,3.3575854382378,4.90586545250604,0.258246646883153,0.422366166455,0.234064526321993,0,0,0,0.0874204024189974,0,0.404950534779652,0,0.946386496074713,1.50825876966313,2.12194825899015,0.425216450755349,1.88652807281682,0.783599367416806,2.87986361028132,4.35877634027623,10.9104073181854,7.75371593086335,16.8067561494993,2.47030445293286,1.00812051903972,10.8647950221099,0,0,0,2.3108129580102,1.49611180822643,0.816677425049476,2.92972141515835,6.2506827561904,5.75876118371178,8.82347232046521,7.5135003345429,6.79714494243615,3.02152363141385,2.73717714292689,3.85448179539531,0,0,0,0.194429899074283,0.279972843250725,0,2.18117387875057,0,0.336093799142464,2.05807548828758,0.286533439938757,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,3.9554654502679,1.4209602298922,1.19840044207362,0.768436610643109,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.427115042397309,0,1.81742863999642,1.81371744256285,4.05810284182349,3.44169550792555,11.5595126730318,0.539703191637817,0.649776417447669,2.24013443548668,0.983110940922263,4.26075806445144,2.59786004602869,2.12003744706204,0.422530259330042,2.56652954828636,0,0,3.24736561516821,1.77351905832569,4.54972000513305,1.02765491747154,21.7507822263624,4.00793775475027,2.08182392119363,2.74018930480927,2.99800146432876,3.01445281105245,4.23319345688537,2.63899841792318,1.97755974187499,2.74738778147832,0.884610551949874,0.161766849947409,1.10420759230197,0.484875253135222,0,0.585561594023094,0.83778682725382,0.766371165625774,0.718890747035522,0,1.01656181658452,0.149790639404823,0,0,0.521472960576829,1.27857728665165,0.20778804455956,0.486723789203273,0.611036183101898,1.36847667671102,2.27450482590307,1.26265113531884,0.910843100738926,0,0.540186389416048,0.90422890701429,0.612328492361951,1.15302348256365,0,0.776110112217047,0,0.378212160335639,0.879755620819744,0.876782929710299,1.94633074457919,0.696504333044333,0.205782136407943,0.796137067273973,0.702213187313235,0.257347907114715,0.284163499395593,1.44988040774851,1.87620847984877,1.98068267607116,0.23674473558521,1.57411385397923,0.925602677324269,0.930135779001631,0.268273401399619,1.05088808130453,1.31647879930784,0.820837320395476,1.13496333364198,1.31579988682799,1.09775057645525,1.74468344388483,0.420579897128254,0.514523061896422,5.61711931072457,0.264450566663544,0.426576501070468,0,0.902072229254653,0.403367049246685,0.889512175379481,1.52180500890047,2.37264530772256,0.988193728344065,1.00534083520108,0.795825888164603,0.38992817423824,1.79763881730844,0.864552199498777,1.99141273254367,0,1.02823661348756,3.38123207019241,0.814605311381257,0.969762435838129,2.17421041659988,1.83385957660346,0.590440591918409,1.72698600625512,2.83813477020141,2.37162101669719,1.16791574001266,0.982794975566015,0.449724224769707,1.42002084971952,0.482354319504834,1.01850340712568,1.15078454980324,0.810676133875177,0.274561413188081,1.43768206527355,1.11642284300551,1.87222603868736,1.51547326768267,2.33216637578486,2.41221760681684,1.47802552133284,0.568474235311454,0.814824882210129,1.18821560042632,0.704070744865506,0.335012514883631,1.19021820443007,1.17080188714679,0.945810864637146,0.44292937929755,1.43509291791738,1.14704320301017,1.55416483679306,1.01254341007058,9.04747703635634,10.8781136763742,15.7364567366092,6.34654516500885,0.321101179975584,0.703270119553219,1.3114795630134,1.00988370881749,0.631016438832513,1.56175497718655,1.29254038639679,0.955875191810208,0.668396022247182,0.566153061577665,0.404810701674894,0.876767573733936,0,0.963963949265421,2.2710413633323,0.712262414669021,1.46598263418218,3.29940245945071,0,0.242780636154981,0.302323556964751,0.754420319023592,0.590603785761546,1.22974059177571,1.29214146584111,0.727067458955011,0.712994756769443,1.58018378967908,1.05418608574999,2.06271086496374,1.02131881726136,0.18006109403131,0.258717367565509,0.214337035031592,1.77340233642274,1.07021290561242,0.493647061806363,0,2.3467170806371,1.48282449604674,1.10264199027481,0.98931751764888,0.968786560175433,0.663442174209714,0.238744688006273,0.492422699235184,0.874442509889552,0.18542530201051,2.05045056957423,3.30218988741156,0.370389054739423,0.941842285023455,0.546776910884101,2.0590035588587,1.69978429993855,1.6794174278839,0.829199842826543,0,0.316335993581135,1.42323626988794,1.18805874903981,0.627264888043406,1.31017538247707,1.07891477107857,1.32245529160537,3.14107130380836,0.777689839750757,1.24267862617385,0,2.24274819065968,1.82004339502807,1.36115831840833,0.129159823477731,0.506868376472335,1.29092962510329,2.0832701575032,0.838874755405687,0.241584120826006,0.864090018773596,1.26404448251271,0.405450430580328,0.718976700153791,0.909445760844565,1.43221356533985,0.596044064343795,0.600977247599844,0.443068581523732,0.504832249740738,0.609654453239999,0.403304740547362,0.584747284438515,0.481059208201647,0.467507608726276,1.13365191807606,0,0.0897138566094757,0,1.15913756419314,5.2551093126331,4.94509385521616,4.07299920250225,3.00943262421218,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0,0,0.31136204275253,0.798049746802062,0.170733605754134,0.729320151204882,0.419226325255965,0.183843508450014,0.44449345560323,0.618105171716683,0,0.252697211763798,0.50695859978048,0.565879024158229,1.40462261204824,0.512201219238954,1.03383844120104,0,0.579421629724277,0.964546102318525,0.824171801606613,0.883193520806384,0.342869252385415,0.177475806159338,0.476872379894642,0.581385666529314,0.752875043322645,1.09998990259179,1.09756783723664,0.789209134313529,0.814824683075171,0,0.355905054372522,0.394017929502254,1.22769312950907,0.929621047115796,0.192906610981141,0.749431733813838,0.233931608445408,0.644613162144895,0.956441660344217,1.10295709559758,0.695603506861264
|phase1_expression=1.60148847104794,5.58360652222978,5.0049916332849,0,0,3.3575854382378,4.90586545250604,0.258246646883153,0.422366166455,0.234064526321993,0,0,0,0.0874204024189974,0,0.404950534779652,0,0.946386496074713,1.50825876966313,2.12194825899015,0.425216450755349,1.88652807281682,0.783599367416806,2.87986361028132,4.35877634027623,10.9104073181854,7.75371593086335,16.8067561494993,2.47030445293286,1.00812051903972,10.8647950221099,0,0,0,2.3108129580102,1.49611180822643,0.816677425049476,2.92972141515835,6.2506827561904,5.75876118371178,8.82347232046521,7.5135003345429,6.79714494243615,3.02152363141385,2.73717714292689,3.85448179539531,0,0,0,0.194429899074283,0.279972843250725,0,2.18117387875057,0,0.336093799142464,2.05807548828758,0.286533439938757,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,3.9554654502679,1.4209602298922,1.19840044207362,0.768436610643109,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.427115042397309,0,1.81742863999642,1.81371744256285,4.05810284182349,3.44169550792555,11.5595126730318,0.539703191637817,0.649776417447669,2.24013443548668,0.983110940922263,4.26075806445144,2.59786004602869,2.12003744706204,0.422530259330042,2.56652954828636,0,0,3.24736561516821,1.77351905832569,4.54972000513305,1.02765491747154,21.7507822263624,4.00793775475027,2.08182392119363,2.74018930480927,2.99800146432876,3.01445281105245,4.23319345688537,2.63899841792318,1.97755974187499,2.74738778147832,0.884610551949874,0.161766849947409,1.10420759230197,0.484875253135222,0,0.585561594023094,0.83778682725382,0.766371165625774,0.718890747035522,0,1.01656181658452,0.149790639404823,0,0,0.521472960576829,1.27857728665165,0.20778804455956,0.486723789203273,0.611036183101898,1.36847667671102,2.27450482590307,1.26265113531884,0.910843100738926,0,0.540186389416048,0.90422890701429,0.612328492361951,1.15302348256365,0,0.776110112217047,0,0.378212160335639,0.879755620819744,0.876782929710299,1.94633074457919,0.696504333044333,0.205782136407943,0.796137067273973,0.702213187313235,0.257347907114715,0.284163499395593,1.44988040774851,1.87620847984877,1.98068267607116,0.23674473558521,1.57411385397923,0.925602677324269,0.930135779001631,0.268273401399619,1.05088808130453,1.31647879930784,0.820837320395476,1.13496333364198,1.31579988682799,1.09775057645525,1.74468344388483,0.420579897128254,0.514523061896422,5.61711931072457,0.264450566663544,0.426576501070468,0,0.902072229254653,0.403367049246685,0.889512175379481,1.52180500890047,2.37264530772256,0.988193728344065,1.00534083520108,0.795825888164603,0.38992817423824,1.79763881730844,0.864552199498777,1.99141273254367,0,1.02823661348756,3.38123207019241,0.814605311381257,0.969762435838129,2.17421041659988,1.83385957660346,0.590440591918409,1.72698600625512,2.83813477020141,2.37162101669719,1.16791574001266,0.982794975566015,0.449724224769707,1.42002084971952,0.482354319504834,1.01850340712568,1.15078454980324,0.810676133875177,0.274561413188081,1.43768206527355,1.11642284300551,1.87222603868736,1.51547326768267,2.33216637578486,2.41221760681684,1.47802552133284,0.568474235311454,0.814824882210129,1.18821560042632,0.704070744865506,0.335012514883631,1.19021820443007,1.17080188714679,0.945810864637146,0.44292937929755,1.43509291791738,1.14704320301017,1.55416483679306,1.01254341007058,9.04747703635634,10.8781136763742,15.7364567366092,6.34654516500885,0.321101179975584,0.703270119553219,1.3114795630134,1.00988370881749,0.631016438832513,1.56175497718655,1.29254038639679,0.955875191810208,0.668396022247182,0.566153061577665,0.404810701674894,0.876767573733936,0,0.963963949265421,2.2710413633323,0.712262414669021,1.46598263418218,3.29940245945071,0,0.242780636154981,0.302323556964751,0.754420319023592,0.590603785761546,1.22974059177571,1.29214146584111,0.727067458955011,0.712994756769443,1.58018378967908,1.05418608574999,2.06271086496374,1.02131881726136,0.18006109403131,0.258717367565509,0.214337035031592,1.77340233642274,1.07021290561242,0.493647061806363,0,2.3467170806371,1.48282449604674,1.10264199027481,0.98931751764888,0.968786560175433,0.663442174209714,0.238744688006273,0.492422699235184,0.874442509889552,0.18542530201051,2.05045056957423,3.30218988741156,0.370389054739423,0.941842285023455,0.546776910884101,2.0590035588587,1.69978429993855,1.6794174278839,0.829199842826543,0,0.316335993581135,1.42323626988794,1.18805874903981,0.627264888043406,1.31017538247707,1.07891477107857,1.32245529160537,3.14107130380836,0.777689839750757,1.24267862617385,0,2.24274819065968,1.82004339502807,1.36115831840833,0.129159823477731,0.506868376472335,1.29092962510329,2.0832701575032,0.838874755405687,0.241584120826006,0.864090018773596,1.26404448251271,0.405450430580328,0.718976700153791,0.909445760844565,1.43221356533985,0.596044064343795,0.600977247599844,0.443068581523732,0.504832249740738,0.609654453239999,0.403304740547362,0.584747284438515,0.481059208201647,0.467507608726276,1.13365191807606,0,0.0897138566094757,0,1.15913756419314,5.2551093126331,4.94509385521616,4.07299920250225,3.00943262421218,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0,0,0.31136204275253,0.798049746802062,0.170733605754134,0.729320151204882,0.419226325255965,0.183843508450014,0.44449345560323,0.618105171716683,0,0.252697211763798,0.50695859978048,0.565879024158229,1.40462261204824,0.512201219238954,1.03383844120104,0,0.579421629724277,0.964546102318525,0.824171801606613,0.883193520806384,0.342869252385415,0.177475806159338,0.476872379894642,0.581385666529314,0.752875043322645,1.09998990259179,1.09756783723664,0.789209134313529,0.814824683075171,0,0.355905054372522,0.394017929502254,1.22769312950907,0.929621047115796,0.192906610981141,0.749431733813838,0.233931608445408,0.644613162144895,0.956441660344217,1.10295709559758,0.695603506861264
|short_description=p2@Ly96
|short_description=p2@Ly96
}}
}}

Latest revision as of 17:10, 26 September 2015

Short description:p2@Ly96
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ly96_5end
Coexpression cluster:NA
Association with transcript: 3bp_to_ENSMUST00000026881, NM_001159711, NM_016923, uc007ajz.2, uc011wim.1_5end
EntrezGene:Ly96
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p2@Ly96

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I216.81
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H921.75
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C14.23
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.88
mammary gland, adult lactating day02.CNhs10480.595-22B615.74
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E54.95
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Uber anatomy
Ontology termp-valuen
trunk mesenchyme4.51e-1045
trunk2.68e-0990
mesenchyme5.29e-0961
entire embryonic mesenchyme5.29e-0961
subdivision of trunk4.88e-0766