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FFCP PHASE1:Mm9::chr9:45792899..45792938,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18475
|EntrezGene=18475
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc009pgy.1_5end
|association_with_transcript=0bp_to_uc009pgy.1_5end
|cluster_id=chr9:45792899..45792938,-
|description=CAGE_peak_1_at_Pafah1b2_5end
|description=CAGE_peak_1_at_Pafah1b2_5end
|id=chr9:45792899..45792938,-
|id=chr9:45792899..45792938,-
|ontology_enrichment_celltype=CL:0000393!4.07e-18!39;CL:0000211!4.07e-18!39;CL:0000540!4.56e-18!33;CL:0000047!4.56e-18!33;CL:0000031!4.56e-18!33;CL:0000404!4.56e-18!33;CL:0000221!6.46e-18!44;CL:0000133!6.46e-18!44;CL:0002319!9.61e-18!43;CL:0000055!4.91e-17!50;CL:0000117!5.57e-16!23;CL:0000337!5.57e-16!23;CL:0002321!1.32e-09!70;CL:0000220!1.32e-09!70
|ontology_enrichment_celltype_v019_2=CL:0000393,4.07e-18,39;CL:0000211,4.07e-18,39;CL:0000540,4.56e-18,33;CL:0000047,4.56e-18,33;CL:0000031,4.56e-18,33;CL:0000404,4.56e-18,33;CL:0000221,6.46e-18,44;CL:0000133,6.46e-18,44;CL:0002319,9.61e-18,43;CL:0000117,5.57e-16,23;CL:0000337,5.57e-16,23;CL:0002321,1.32e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.72e-33!75;UBERON:0001016!2.72e-33!75;UBERON:0001017!3.55e-32!73;UBERON:0005743!3.55e-32!73;UBERON:0004121!2.59e-31!102;UBERON:0000924!2.59e-31!102;UBERON:0006601!2.59e-31!102;UBERON:0002346!2.13e-28!71;UBERON:0003075!2.13e-28!71;UBERON:0007284!2.13e-28!71;UBERON:0001049!1.29e-25!52;UBERON:0005068!1.29e-25!52;UBERON:0006241!1.29e-25!52;UBERON:0007135!1.29e-25!52;UBERON:0000955!3.12e-24!50;UBERON:0006238!3.12e-24!50;UBERON:0002616!1.16e-23!49;UBERON:0000033!1.64e-23!63;UBERON:0003056!1.01e-20!49;UBERON:0002020!9.67e-20!34;UBERON:0003080!2.29e-19!40;UBERON:0002780!8.67e-19!39;UBERON:0001890!8.67e-19!39;UBERON:0006240!8.67e-19!39;UBERON:0000153!8.61e-17!94;UBERON:0002791!1.51e-16!29;UBERON:0003528!1.51e-16!29;UBERON:0001893!1.51e-16!29;UBERON:0007811!4.27e-16!86;UBERON:0000956!1.43e-11!21;UBERON:0001869!1.43e-11!21;UBERON:0000203!1.43e-11!21;UBERON:0000025!2.39e-09!114;UBERON:0002619!2.94e-09!17;UBERON:0004111!7.66e-08!122;UBERON:0000475!2.32e-07!200;UBERON:0003076!8.47e-07!12;UBERON:0003057!8.47e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.72e-33,75;UBERON:0001017,3.55e-32,73;UBERON:0004121,1.54e-30,95;UBERON:0000924,1.54e-30,95;UBERON:0006601,1.54e-30,95;UBERON:0002346,3.21e-28,64;UBERON:0003075,3.21e-28,64;UBERON:0007284,3.21e-28,64;UBERON:0000073,4.41e-27,54;UBERON:0001049,1.29e-25,52;UBERON:0005068,1.29e-25,52;UBERON:0006241,1.29e-25,52;UBERON:0007135,1.29e-25,52;UBERON:0010371,1.81e-25,73;UBERON:0010314,3.48e-24,92;UBERON:0000955,3.80e-22,47;UBERON:0006238,3.80e-22,47;UBERON:0002616,1.38e-21,46;UBERON:0003056,1.01e-20,49;UBERON:0002020,9.67e-20,34;UBERON:0003080,2.29e-19,40;UBERON:0002780,8.67e-19,39;UBERON:0001890,8.67e-19,39;UBERON:0006240,8.67e-19,39;UBERON:0003528,1.51e-16,29;UBERON:0002791,1.51e-16,29;UBERON:0001893,1.51e-16,29;UBERON:0000956,1.43e-11,21;UBERON:0001869,1.43e-11,21;UBERON:0000203,1.43e-11,21;UBERON:0000025,2.39e-09,114;UBERON:0002619,2.94e-09,17;UBERON:0004111,7.66e-08,122;UBERON:0003076,8.47e-07,12;UBERON:0003057,8.47e-07,12
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.9128534598834,44.3901950777603,40.3540411307925,41.9256122392661,35.4693230992078,36.6154808863238,30.8872011541155,34.9960427887841,26.0962511496509,31.0031116276305,45.4530299973696,40.5373301619889,47.4460899559476,44.8184587467727,37.0013914824804,40.9576762873681,55.3368635586788,55.7851712344782,55.0811795483294,36.291780788491,40.1334123197786,55.7494342047952,44.4738444523702,42.7439507596946,39.027819655511,42.3191285684094,39.4241074425498,39.2854142284375,40.2856135293109,43.2092593733849,39.0197336479573,37.1314525618457,40.0241261223771,36.3487165784679,26.9809156502102,31.5220053791172,27.721581692328,35.7594232855487,41.3425731228888,48.7974436173073,37.3629313505221,39.6581501296272,29.5927541380864,81.8890171794746,76.8743144966985,96.819341771258,73.725015225442,91.1159751294954,101.97817614761,85.0528350292075,89.6139194416199,84.2844880710621,98.8922195445976,90.1912050506495,47.8829848081237,64.1958357635544,51.5386240184783,69.3819568298621,63.6098539237049,51.1167473943715,43.4733970774067,55.1981040497922,44.2220120586646,47.4006290794748,49.420101443152,46.8207537349412,50.0676691806078,53.9893408182765,44.7716069806089,62.1139987064425,55.1720370526196,57.6920261124629,52.2556166477111,32.5725789766145,48.6283708876585,51.7406532185686,45.2027355726542,48.6545496747259,45.0995860062636,39.6953701133916,52.8770119990064,56.3587072460326,34.229678571122,52.0807729565124,59.0041849429625,48.698494137193,50.199536544253,49.3840924111722,64.9507502638659,51.2310222495444,44.2634371339495,47.630794685142,39.9270468606323,46.1416992884639
|phase1_expression=53.8100126272108,40.4811472861659,36.8549383905524,29.3390284967625,26.0465779572101,31.3934238475234,25.6973904655078,22.0800883085095,51.3878835853584,42.3656792642808,38.6952608189641,36.6951931378547,26.0225109495433,26.4009615305372,42.3049397505892,28.5490127019655,39.8750270533044,24.9215110633008,25.2290557834559,19.9463136345074,46.4336364224841,38.7234709683453,34.2171723772005,25.9187724925319,23.1703373877842,32.7312219545562,29.2918157388171,34.6908684624281,18.6222951067246,26.9672238843126,33.2595765982957,38.7368710810375,30.7532393792285,15.8481681015439,23.9746844393558,24.9351968037739,24.7044921077467,40.1790365507431,51.5681327385708,46.593613213668,42.940898626264,54.6436387966757,36.8987868303677,37.7690453926732,43.5920804243913,58.5514139395764,50.8554373826225,56.2504903461552,58.4365246073695,67.6616048778506,61.3140526719088,47.4383462404406,33.2209559994318,31.9159342484992,36.2981303073861,84.1238355837547,69.3410924651791,75.2881254725066,166.304130826589,134.892699714368,154.021031052002,66.4135282855499,64.9185201161132,46.344835439992,39.554654502679,35.524005747305,35.6524131516902,37.6533939215123,141.743700025689,130.95576018174,143.02097371894,131.113801841346,120.373354818629,134.617388337234,144.439124824482,173.732350669294,121.127469099328,146.20200210754,143.622108594588,156.28525096028,160.652302165831,168.255018689833,147.408623472729,111.989759396304,113.9874928415,107.539433697889,135.253096759148,149.492355551891,89.0540033598244,73.984557344543,33.6242806893946,28.3939879403858,50.3178786943735,28.6042691568043,31.1892680374881,28.6737207742295,29.7742170679314,34.5973554833457,34.2917526075787,37.1006553235857,56.7598981700022,56.4636500622998,73.8935195149272,78.2173373468664,44.1641723662877,56.7526098664221,55.6076889516262,30.487095884989,44.2783781036664,59.0799713478003,57.0766725060587,48.1055455733183,48.1986389265162,54.712318520602,47.1530715614176,52.0259688104856,52.1581381919529,36.1498392299779,35.384422077995,50.1477234836968,40.1931563597916,32.9715172131951,27.9587641827183,84.3208695393256,76.0291545732842,25.5457055208591,39.2993608379418,32.9946502046374,29.480292680951,106.650935256234,89.2126175496322,114.345460422707,86.0430384951768,79.7832226870631,101.816141834184,96.8580340514513,55.0950958430211,33.7142890353352,41.95197789999,47.1389757185702,60.5060059776572,69.2005334344753,76.5264051672734,67.0636439368932,62.1173237251623,60.4696759744491,62.7801554550183,38.8055056108524,79.5445893922188,62.9723246958838,48.9144125175778,53.4837587123283,45.8777961222236,49.8000598126698,46.3009806917873,43.986572966887,26.6841011179029,30.1097051324217,30.689657934724,59.85934826276,52.0647853158034,58.1600458519078,51.6103523575758,46.4363586923873,49.9825445755106,45.1115852815791,36.2169091889486,51.0264546144531,44.2665996267262,39.4001913789829,35.7513450097224,29.3861974724918,26.7851140655082,29.3912057085214,79.0690206601118,113.915405903868,26.4335026387038,30.6762657329711,57.3745393939779,57.5946946213888,47.8098281504966,42.1518566462786,37.804267453628,40.7082839880877,33.6915633696603,45.951008367999,36.6949404848393,36.8069473276129,37.8230329011093,20.6728463990471,27.6656703839609,35.248005366023,70.5564591545464,53.3540553887434,47.3372489826938,46.2288514208863,38.0146874848546,44.5362456303523,42.6214260217494,37.4929775868189,33.911725213737,33.4406314228079,30.2381679628892,56.3936457320398,46.3879228467159,43.1735255778919,50.7150303471257,42.6883572761778,38.7031294707758,29.0573098825319,31.1299635408068,32.9473695825698,34.5043695665651,29.0269939181433,33.388031023258,29.8043075977592,29.6005732311155,16.4030797263545,41.1999614071528,65.7535198843582,58.0155316133612,49.0563297890294,52.335925368336,52.4294585792883,38.0869825417622,53.8568868087525,47.7634486641759,43.6285438608087,56.9253524107229,39.4910588464929,44.5527253214011,48.6020836833879,43.729472342389,38.6173035511284,42.7834917526562,39.4589547215767,119.770740130893,120.493613816785,44.0985003063257,31.3063949733423,67.8342671744952,55.8327404344193,76.9061529906092,53.7679795393242,61.7152327208232,71.6183622895746,59.5071731462095,69.2646383249809,71.9423755862673,91.8978964966368,47.9757488003948,43.8041385021448,45.4454616596477,35.1386361931501,25.2215762845929,45.8855402332915,56.2321815954437,38.0982261106914,33.6644157884081,39.9665692327106,37.9889590957285,44.7146487257332,35.6497378384721,36.028190404683,29.5172104009997,28.8779521094923,55.1512161321137,61.4008330646768,56.400386129281,70.945558595457,57.6355759337389,61.5372420727143,59.895843499172,47.8009970109921,45.7609830724235,59.7366439835973,37.9308844654535,44.5192882941996,41.3348932341518,51.7484895883577,38.6766394570162,40.0503795377949,30.0225261728746,129.612286105346,36.5663684907405,42.1029210644974,40.3724069665971,33.529585346835,35.2671107520245,32.9440569417393,42.4946074984638,38.066795032035,45.4677913816554,33.413471630529,60.2620067772063,55.9128534598834,44.3901950777603,40.3540411307925,41.9256122392661,35.4693230992078,36.6154808863238,30.8872011541155,34.9960427887841,26.0962511496509,31.0031116276305,45.4530299973696,40.5373301619889,47.4460899559476,44.8184587467727,37.0013914824804,40.9576762873681,55.3368635586788,55.7851712344782,55.0811795483294,36.291780788491,40.1334123197786,55.7494342047952,44.4738444523702,42.7439507596946,39.027819655511,42.3191285684094,39.4241074425498,39.2854142284375,40.2856135293109,43.2092593733849,39.0197336479573,37.1314525618457,40.0241261223771,36.3487165784679,26.9809156502102,31.5220053791172,27.721581692328,35.7594232855487,41.3425731228888,48.7974436173073,37.3629313505221,39.6581501296272,29.5927541380864,81.8890171794746,76.8743144966985,96.819341771258,73.725015225442,91.1159751294954,101.97817614761,85.0528350292075,89.6139194416199,84.2844880710621,98.8922195445976,90.1912050506495,47.8829848081237,64.1958357635544,51.5386240184783,69.3819568298621,63.6098539237049,51.1167473943715,43.4733970774067,55.1981040497922,44.2220120586646,47.4006290794748,49.420101443152,46.8207537349412,50.0676691806078,53.9893408182765,44.7716069806089,62.1139987064425,55.1720370526196,57.6920261124629,52.2556166477111,32.5725789766145,48.6283708876585,51.7406532185686,45.2027355726542,48.6545496747259,45.0995860062636,39.6953701133916,52.8770119990064,56.3587072460326,34.229678571122,52.0807729565124,59.0041849429625,48.698494137193,50.199536544253,49.3840924111722,64.9507502638659,51.2310222495444,44.2634371339495,47.630794685142,39.9270468606323,46.1416992884639
|short_description=p1@Pafah1b2
|short_description=p1@Pafah1b2
}}
}}

Latest revision as of 17:59, 26 September 2015

Short description:p1@Pafah1b2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pafah1b2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_uc009pgy.1_5end
EntrezGene:Pafah1b2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pafah1b2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G753.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I540.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I636.85
CD326+ enterocyte, pool1.CNhs13542.11848-124I329.34
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I731.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I825.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E751.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F242.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E638.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F136.70
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E826.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A142.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A328.55
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A539.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A224.92
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A425.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.95
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A346.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H238.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I934.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D223.17
GP2+ M cell, pool1.CNhs13228.11845-124H932.73
GP2+ M cell, pool2.CNhs13231.11846-124I129.29
GP2+ M cell, pool3.CNhs13240.11847-124I234.69
Ileum epithelium, pool1.CNhs13199.10252-104B918.62
Ileum epithelium, pool2.CNhs13232.10253-104C126.97
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C833.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I338.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G630.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.97
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F624.94
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F724.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G840.18
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H151.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H346.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G942.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H254.64
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H436.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D837.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D943.59
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B358.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B750.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C256.25
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B858.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C367.66
Mouse Astrocytes, donor2.CNhs12078.11552-120C461.31
Mouse Astrocytes, donor3.CNhs12107.11633-122C447.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.22
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A136.30
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C184.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E169.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C575.29
Mouse Granule cells, donor1.CNhs12131.11713-123C3166.30
Mouse Granule cells, donor2.CNhs12357.11731-123E3134.89
Mouse Granule cells, donor3.CNhs12108.11636-122C7154.02
Mouse Meningeal cells, donor1.CNhs12132.11716-123C666.41
Mouse Meningeal cells, donor3.CNhs12109.11639-122D164.92
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C746.34
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E739.55
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D235.52
Mouse Microglia, donor1.CNhs12629.11718-123C835.65
Mouse Microglia, donor2.CNhs12634.11736-123E837.65
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5141.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5130.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9143.02
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1131.11
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5120.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2134.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2144.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6173.73
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3121.13
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3146.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7143.62
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4156.29
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4160.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8168.26
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4147.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5111.99
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6113.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6107.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6135.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1149.49
Mouse Schwann, donor1.CNhs12507.11728-123D989.05
Mouse Schwann, donor2.CNhs12573.11746-123F973.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.62
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F728.39
Mouse hepatocyte, donor1.CNhs13078.11714-123C450.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C828.60
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F628.67
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A729.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I734.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E334.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I837.10
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G656.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H156.46
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I873.89
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B678.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G144.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G256.75
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G355.61
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B630.49
accessory axillary lymph node, adult.CNhs10475.1063-29H944.28
adrenal gland, adult.CNhs10508.49-24D759.08
adrenal gland, embryo E14.CNhs11038.406-44C557.08
adrenal gland, embryo E16.CNhs11004.1254-43D648.11
adrenal gland, embryo E17.CNhs11043.1263-45I148.20
adrenal gland, embryo E18.CNhs11026.1262-18F554.71
adrenal gland, neonate N00.CNhs11191.1311-23C147.15
adrenal gland, neonate N25.CNhs11223.1377-27I352.03
amnion, adult pregnant day17.5.CNhs10488.583-22A852.16
aorta, adult.CNhs10498.46-23H136.15
bone (os femoris), adult.CNhs10483.56-12G235.38
bone (os femoris), neonate N02.CNhs11227.1985-43F550.15
bone (os femoris), neonate N16.CNhs11225.1525-43A640.19
bone (os femoris), neonate N20.CNhs11195.1350-25C332.97
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B284.32
cerebellum, neonate N30.CNhs11135.1395-42I276.03
colon, adult.CNhs10468.36-18H725.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C739.30
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D132.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D429.48
corpora quadrigemina, adult.CNhs10501.16-22A4106.65
corpus striatum, adult.CNhs10487.19-21D889.21
corpus striatum, neonate N00.CNhs11226.630-43F1114.35
cortex, adult.CNhs10473.12-14D586.04
cortex, neonate N30.CNhs11107.1392-42F279.78
diencephalon, adult.CNhs10482.20-12F2101.82
diencephalon, neonate N30.CNhs11201.1388-42B296.86
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B155.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.71
epididymis, adult.CNhs10490.58-23B241.95
eyeball, adult.CNhs10484.31-12G447.14
eyeball, embryo E12.CNhs11016.345-16C660.51
eyeball, embryo E14.CNhs10521.399-16E269.20
eyeball, embryo E15.CNhs10593.426-16C976.53
eyeball, embryo E17.CNhs11023.1261-18D467.06
eyeball, neonate N00.CNhs11207.633-15C662.12
eyeball, neonate N01.CNhs11140.1532-43E760.47
eyeball, neonate N02.CNhs11205.1551-44G862.78
eyeball, neonate N16.CNhs11188.777-19A238.81
forelimb, embryo E11.CNhs10596.335-25E279.54
forelimb, embryo E12.CNhs10600.359-14H262.97
forelimb, embryo E13.CNhs10589.384-1E248.91
forelimb, embryo E14.CNhs10577.413-26A853.48
forelimb, embryo E15.CNhs11007.437-20E745.88
forelimb, embryo E17.CNhs10598.1517-43C449.80
forelimb, embryo E18.CNhs11008.1520-43B546.30
gonad, embryo E13.CNhs11044.1564-45I643.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D230.11
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D530.69
heart, embryo E11.CNhs10586.331-24E959.86
heart, embryo E12.CNhs11015.353-12F552.06
heart, embryo E13.CNhs11013.376-3I958.16
heart, embryo E14.CNhs10597.403-26D451.61
heart, embryo E15.CNhs11017.431-16C846.44
heart, embryo E16.CNhs11021.457-17C649.98
heart, embryo E17.CNhs11025.479-18E545.11
heart, embryo E18.CNhs11030.1283-20G336.22
heart, neonate N00.CNhs11213.639-21E351.03
heart, neonate N03.CNhs11221.1349-25I244.27
heart, neonate N10.CNhs11118.749-24G139.40
heart, neonate N16.CNhs11209.782-15G135.75
heart, neonate N20.CNhs11127.821-26I629.39
heart, neonate N25.CNhs11196.1351-25D326.79
heart, neonate N30.CNhs11202.1390-42D229.39
hippocampus, adult.CNhs10478.13-16E879.07
hippocampus, neonate N00.CNhs11228.627-43G1113.92
intestinal mucosa, adult.CNhs10506.860-29I326.43
intestine, adult.CNhs10496.178-9A330.68
intestine, embryo E12.CNhs11019.1251-16I557.37
intestine, embryo E13.CNhs11010.381-16D557.59
intestine, embryo E15.CNhs10602.976-16D847.81
intestine, embryo E16.CNhs10585.463-22H442.15
intestine, embryo E17.CNhs10582.482-18D337.80
intestine, embryo E18.CNhs10526.1289-20F740.71
intestine, neonate N00.CNhs11126.644-26D133.69
intestine, neonate N01.CNhs11192.1322-23E945.95
intestine, neonate N06.CNhs11102.688-20B836.69
intestine, neonate N07.CNhs11095.720-20F236.81
intestine, neonate N10.CNhs11098.755-23A537.82
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E327.67
intestine, neonate N30.CNhs11131.1384-42G135.25
kidney, embryo E14.CNhs10606.411-4I970.56
kidney, embryo E15.CNhs10997.434-16F853.35
kidney, embryo E16.CNhs10584.464-22A547.34
kidney, embryo E17.CNhs11028.483-18I246.23
kidney, embryo E18.CNhs11001.1288-20C738.01
kidney, neonate N00.CNhs11214.646-21G744.54
kidney, neonate N10.CNhs11206.758-6D542.62
kidney, neonate N20.CNhs11113.832-19I137.49
kidney, neonate N25.CNhs11122.1353-25F333.91
kidney, neonate N30.CNhs11203.1385-42H133.44
liver, adult pregnant day01.CNhs10466.508-5B230.24
liver, embryo E12.CNhs10601.355-15F856.39
liver, embryo E13.CNhs10524.378-3H646.39
liver, embryo E14.CNhs10594.409-16E143.17
liver, embryo E15.CNhs10520.433-16D750.72
liver, embryo E16.CNhs10523.462-17F542.69
liver, embryo E17.CNhs10510.481-18A338.70
liver, embryo E18.CNhs10579.499-43G429.06
liver, neonate N00.CNhs11117.641-24F431.13
liver, neonate N03.CNhs11123.1345-25G232.95
liver, neonate N06.CNhs11101.684-20A834.50
liver, neonate N07.CNhs11103.716-20H229.03
liver, neonate N10.CNhs11115.751-24B933.39
liver, neonate N20.CNhs11220.823-25A329.80
liver, neonate N25.CNhs11198.1368-26H129.60
liver, neonate N30.CNhs11106.1382-42D116.40
lung, adult.CNhs10474.28-22B141.20
lung, embryo E12.CNhs10522.354-16G265.75
lung, embryo E14.CNhs10604.404-26F858.02
lung, embryo E15.CNhs11020.432-17C549.06
lung, embryo E16.CNhs10998.458-17B652.34
lung, embryo E17.CNhs10605.480-44A652.43
lung, embryo E18.CNhs10583.1287-20I638.09
lung, neonate N00.CNhs11224.640-42C653.86
lung, neonate N06.CNhs11212.683-20E547.76
lung, neonate N07.CNhs11111.715-19A343.63
lung, neonate N10.CNhs11219.750-23E656.93
lung, neonate N20.CNhs11109.822-18A439.49
lung, neonate N25.CNhs11119.1359-25C744.55
lung, neonate N30.CNhs11133.1394-42H248.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A143.73
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A138.62
mammary gland, adult lactating day02.CNhs10480.595-22B642.78
mammary gland, adult pregnant day19.CNhs10476.588-5H239.46
medulla oblongata, adult.CNhs10477.17-12C2119.77
medulla oblongata, neonate N30.CNhs11200.1396-42A3120.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C744.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C231.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E167.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E255.83
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E376.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D753.77
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D861.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D971.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D459.51
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D569.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D671.94
olfactory brain, adult.CNhs10489.18-22I991.90
ovary, adult.CNhs10507.91-2I747.98
ovary, embryo E18.CNhs11040.505-44H743.80
ovary, neonate N00.CNhs11217.1299-22I445.45
oviduct, adult pregnant day01.CNhs10500.988-6G635.14
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F445.89
pancreas, embryo E15.CNhs11042.1556-45F256.23
pancreas, embryo E16.CNhs11003.460-26E538.10
pancreas, embryo E17.CNhs10599.1558-45G333.66
pancreas, embryo E18.CNhs10580.1535-43I739.97
pancreas, neonate N00.CNhs11105.645-26G937.99
pancreas, neonate N01.CNhs11138.1531-43D744.71
pancreas, neonate N02.CNhs11139.1539-43D835.65
pancreas, neonate N16.CNhs11136.787-43B636.03
pancreas, neonate N25.CNhs11094.1555-45E229.52
pancreas, neonate N30.CNhs11182.1548-44H528.88
pituitary gland, adult.CNhs10493.21-1G855.15
pituitary gland, embryo E12.CNhs11018.346-16E661.40
pituitary gland, embryo E13.CNhs11009.370-44C756.40
pituitary gland, embryo E14.CNhs11037.398-44A570.95
pituitary gland, embryo E15.CNhs10592.427-16B957.64
pituitary gland, embryo E16.CNhs11036.449-43F661.54
pituitary gland, embryo E17.CNhs11039.1265-44F559.90
pituitary gland, neonate N00.CNhs11190.1308-22E947.80
placenta, adult pregnant day10.CNhs10472.539-13I745.76
placenta, adult pregnant day17.CNhs10464.577-18G359.74
prostate, adult.CNhs10470.859-1F837.93
skin, adult.CNhs10492.30-1C344.52
skin, neonate N00.CNhs11124.650-25G441.33
skin, neonate N03.CNhs11215.662-22H351.75
skin, neonate N06.CNhs11097.693-20I538.68
skin, neonate N10.CNhs11108.762-6C440.05
small intestine, neonate N16.CNhs11114.790-21I130.02
spinal cord, adult.CNhs10505.24-13C9129.61
spleen, adult.CNhs10465.25-2G236.57
spleen, embryo E16.CNhs11035.461-43C142.10
spleen, embryo E18.CNhs11011.1271-21F240.37
spleen, neonate N10.CNhs11116.752-24D133.53
spleen, neonate N20.CNhs11112.824-19H135.27
spleen, neonate N25.CNhs11099.1354-25G332.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C642.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C938.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D345.47
stomach, adult.CNhs10503.33-1H633.41
stomach, embryo E12.CNhs10588.356-43E360.26
stomach, embryo E15.CNhs10603.1252-16G855.91
stomach, embryo E16.CNhs11022.459-17D444.39
stomach, embryo E17.CNhs11006.1035-18D540.35
stomach, embryo E18.CNhs10999.1286-20C641.93
stomach, neonate N03.CNhs11193.1340-24B835.47
stomach, neonate N07.CNhs11210.718-18A936.62
stomach, neonate N25.CNhs11104.1355-25E430.89
stomach, neonate N30.CNhs11134.1386-42I135.00
submandibular gland, adult.CNhs10469.59-29C126.10
testis, adult.CNhs10504.57-7G531.00
testis, embryo E13.CNhs11031.389-23F545.45
testis, embryo E15.CNhs11034.443-27C540.54
testis, embryo E16.CNhs11033.470-26G547.45
testis, embryo E17.CNhs11029.486-18I544.82
testis, embryo E18.CNhs11027.503-18G537.00
testis, neonate N00.CNhs11189.1300-22B740.96
testis, neonate N07.CNhs11222.726-26I455.34
testis, neonate N10.CNhs11204.763-44D955.79
testis, neonate N20.CNhs11110.839-18H355.08
testis, neonate N30.CNhs11130.1391-42E236.29
thymus, adult.CNhs10471.38-12B540.13
thymus, embryo E14.CNhs11041.402-44I455.75
thymus, embryo E15.CNhs11005.430-45I244.47
thymus, embryo E16.CNhs11002.456-26C542.74
thymus, embryo E17.CNhs10581.478-18C139.03
thymus, embryo E18.CNhs10595.1273-19G442.32
thymus, neonate N02.CNhs11181.1541-43F839.42
thymus, neonate N03.CNhs11137.2104-43C739.29
thymus, neonate N06.CNhs11197.681-26C440.29
thymus, neonate N07.CNhs11211.713-19D343.21
thymus, neonate N10.CNhs11194.748-24E439.02
thymus, neonate N20.CNhs11186.820-7A237.13
thymus, neonate N25.CNhs11125.1362-25G740.02
thymus, neonate N30.CNhs11132.1393-42G236.35
tongue, adult.CNhs10499.32-1B426.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H331.52
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F727.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G535.76
urinary bladder, adult.CNhs10481.879-12E441.34
uterus, adult pregnant day19.CNhs10497.590-15F548.80
uterus, adult.CNhs10509.92-27E537.36
vagina, adult.CNhs10502.89-27D539.66
vesicular gland, adult.CNhs10491.51-27F829.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A181.89
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A276.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A396.82
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D773.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A491.12
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5101.98
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A685.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A789.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A884.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A998.89
whole body, embryo E11.CNhs11014.324-5I890.19
whole body, embryo E12.CNhs10587.857-27C947.88
whole body, embryo E13.CNhs10512.372-23H264.20
whole body, embryo E14.5.CNhs10578.420-27D251.54
whole body, embryo E14.CNhs10519.395-14B169.38
whole body, embryo E16.CNhs10514.453-14F263.61
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G551.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G543.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G555.20
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G544.22
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G547.40
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G549.42
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G546.82
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G550.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G553.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G544.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G562.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G555.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G557.69
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G552.26
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G532.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G548.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G551.74
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G545.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G548.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G545.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G539.70
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G552.88
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G556.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G534.23
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G552.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G559.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G548.70
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G550.20
whole body, embryo E17.5.CNhs10513.490-9F949.38
whole body, embryo E17.CNhs10517.475-3I564.95
whole body, embryo E18.CNhs10516.493-3B351.23
whole body, neonate N00.CNhs10525.657-19C244.26
whole body, neonate N01.CNhs10576.659-23C647.63
whole body, neonate N06.CNhs10515.692-21D139.93
whole body, neonate N10.CNhs10518.761-6B446.14





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell4.07e-1839
electrically active cell4.07e-1839
neuron4.56e-1833
neuronal stem cell4.56e-1833
neuroblast4.56e-1833
electrically signaling cell4.56e-1833
ectodermal cell6.46e-1844
neurectodermal cell6.46e-1844
neural cell9.61e-1843
CNS neuron (sensu Vertebrata)5.57e-1623
neuroblast (sensu Vertebrata)5.57e-1623
embryonic cell1.32e-0970

Uber anatomy
Ontology termp-valuen
nervous system2.72e-3375
central nervous system3.55e-3273
ectoderm-derived structure1.54e-3095
ectoderm1.54e-3095
presumptive ectoderm1.54e-3095
neurectoderm3.21e-2864
neural plate3.21e-2864
presumptive neural plate3.21e-2864
regional part of nervous system4.41e-2754
neural tube1.29e-2552
neural rod1.29e-2552
future spinal cord1.29e-2552
neural keel1.29e-2552
ecto-epithelium1.81e-2573
structure with developmental contribution from neural crest3.48e-2492
brain3.80e-2247
future brain3.80e-2247
regional part of brain1.38e-2146
pre-chordal neural plate1.01e-2049
gray matter9.67e-2034
anterior neural tube2.29e-1940
regional part of forebrain8.67e-1939
forebrain8.67e-1939
future forebrain8.67e-1939
brain grey matter1.51e-1629
regional part of telencephalon1.51e-1629
telencephalon1.51e-1629
cerebral cortex1.43e-1121
cerebral hemisphere1.43e-1121
pallium1.43e-1121
tube2.39e-09114
regional part of cerebral cortex2.94e-0917
anatomical conduit7.66e-08122
posterior neural tube8.47e-0712
chordal neural plate8.47e-0712
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