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FFCP PHASE1:Mm9::chr4:15076198..15076217,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=69352
|EntrezGene=69352
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q8BG18
|UniProt=Q8BG18
|association_with_transcript=60bp_to_ENSMUST00000041606,NM_178617,uc008sbi.2_5end
|association_with_transcript=60bp_to_ENSMUST00000041606,NM_178617,uc008sbi.2_5end
|cluster_id=chr4:15076198..15076217,-
|description=CAGE_peak_3_at_Necab1_5end
|description=CAGE_peak_3_at_Necab1_5end
|id=chr4:15076198..15076217,-
|id=chr4:15076198..15076217,-
|ontology_enrichment_celltype=CL:0000117!2.19e-11!23;CL:0000337!2.19e-11!23
|ontology_enrichment_celltype=CL:0000117!2.19e-11!23;CL:0000337!2.19e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-14,23;CL:0000337,1.25e-14,23;CL:0000540,2.78e-08,33;CL:0000047,2.78e-08,33;CL:0000031,2.78e-08,33;CL:0000404,2.78e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.77e-18!52;UBERON:0005068!3.77e-18!52;UBERON:0006241!3.77e-18!52;UBERON:0007135!3.77e-18!52;UBERON:0002346!8.19e-18!71;UBERON:0003075!8.19e-18!71;UBERON:0007284!8.19e-18!71;UBERON:0000033!2.73e-17!63;UBERON:0002020!5.18e-17!34;UBERON:0000955!7.48e-17!50;UBERON:0006238!7.48e-17!50;UBERON:0002616!3.34e-16!49;UBERON:0003056!1.12e-15!49;UBERON:0000073!1.99e-15!75;UBERON:0001016!1.99e-15!75;UBERON:0001017!4.73e-15!73;UBERON:0005743!4.73e-15!73;UBERON:0004121!1.67e-14!102;UBERON:0000924!1.67e-14!102;UBERON:0006601!1.67e-14!102;UBERON:0003080!6.89e-14!40;UBERON:0002791!1.16e-13!29;UBERON:0003528!1.16e-13!29;UBERON:0001893!1.16e-13!29;UBERON:0002780!3.08e-13!39;UBERON:0001890!3.08e-13!39;UBERON:0006240!3.08e-13!39;UBERON:0000956!1.38e-09!21;UBERON:0001869!1.38e-09!21;UBERON:0000203!1.38e-09!21;UBERON:0002021!4.88e-09!10;UBERON:0000411!4.88e-09!10;UBERON:0001950!4.88e-09!10;UBERON:0002619!3.17e-08!17;UBERON:0007811!4.63e-08!86;UBERON:0000025!1.53e-07!114;UBERON:0000153!3.38e-07!94;UBERON:0004111!5.93e-07!122
|ontology_enrichment_uberon=UBERON:0001049!3.77e-18!52;UBERON:0005068!3.77e-18!52;UBERON:0006241!3.77e-18!52;UBERON:0007135!3.77e-18!52;UBERON:0002346!8.19e-18!71;UBERON:0003075!8.19e-18!71;UBERON:0007284!8.19e-18!71;UBERON:0000033!2.73e-17!63;UBERON:0002020!5.18e-17!34;UBERON:0000955!7.48e-17!50;UBERON:0006238!7.48e-17!50;UBERON:0002616!3.34e-16!49;UBERON:0003056!1.12e-15!49;UBERON:0000073!1.99e-15!75;UBERON:0001016!1.99e-15!75;UBERON:0001017!4.73e-15!73;UBERON:0005743!4.73e-15!73;UBERON:0004121!1.67e-14!102;UBERON:0000924!1.67e-14!102;UBERON:0006601!1.67e-14!102;UBERON:0003080!6.89e-14!40;UBERON:0002791!1.16e-13!29;UBERON:0003528!1.16e-13!29;UBERON:0001893!1.16e-13!29;UBERON:0002780!3.08e-13!39;UBERON:0001890!3.08e-13!39;UBERON:0006240!3.08e-13!39;UBERON:0000956!1.38e-09!21;UBERON:0001869!1.38e-09!21;UBERON:0000203!1.38e-09!21;UBERON:0002021!4.88e-09!10;UBERON:0000411!4.88e-09!10;UBERON:0001950!4.88e-09!10;UBERON:0002619!3.17e-08!17;UBERON:0007811!4.63e-08!86;UBERON:0000025!1.53e-07!114;UBERON:0000153!3.38e-07!94;UBERON:0004111!5.93e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.53e-24,34;UBERON:0000073,8.80e-24,54;UBERON:0001049,8.10e-22,52;UBERON:0005068,8.10e-22,52;UBERON:0006241,8.10e-22,52;UBERON:0007135,8.10e-22,52;UBERON:0001016,1.39e-19,75;UBERON:0002346,1.61e-19,64;UBERON:0003075,1.61e-19,64;UBERON:0007284,1.61e-19,64;UBERON:0001017,2.19e-19,73;UBERON:0003528,6.14e-19,29;UBERON:0002791,6.14e-19,29;UBERON:0001893,6.14e-19,29;UBERON:0000955,3.34e-17,47;UBERON:0006238,3.34e-17,47;UBERON:0002616,2.53e-16,46;UBERON:0003080,9.83e-16,40;UBERON:0004121,1.39e-15,95;UBERON:0000924,1.39e-15,95;UBERON:0006601,1.39e-15,95;UBERON:0010371,2.02e-15,73;UBERON:0003056,3.93e-15,49;UBERON:0002780,7.91e-15,39;UBERON:0001890,7.91e-15,39;UBERON:0006240,7.91e-15,39;UBERON:0002021,6.41e-13,10;UBERON:0000411,6.41e-13,10;UBERON:0001950,6.41e-13,10;UBERON:0000956,8.45e-13,21;UBERON:0001869,8.45e-13,21;UBERON:0000203,8.45e-13,21;UBERON:0002619,6.80e-12,17;UBERON:0010314,3.09e-10,92;UBERON:0000025,1.08e-09,114;UBERON:0004111,3.68e-08,122;UBERON:0002420,2.01e-07,8;UBERON:0007245,2.01e-07,8;UBERON:0010009,2.01e-07,8;UBERON:0010011,2.01e-07,8;UBERON:0000454,2.01e-07,8;UBERON:0002240,2.15e-07,6;UBERON:0005174,2.15e-07,6;UBERON:0001137,2.15e-07,6;UBERON:0003076,8.14e-07,12;UBERON:0003057,8.14e-07,12
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,3.1691570175309,0,0,0,0,0,0,0,1.14058573539325,1.08004750665353,0.841299845405528,4.57041575046086,4.8591079009355,1.10241719293459,0.191690942036473,1.83843757322004,4.40463523997555,13.5348578370299,7.52672012955593,1.18697658957174,1.55528994124096,1.56274011167028,1.95428099300967,5.06486349028512,5.04234217663473,10.3120004915784,9.5389026135399,6.71038004971082,0.151452386666368,1.66257432234928,0,2.58127163094416,0,4.31762553310254,3.89865850468601,1.79210754838934,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,1.48439043634778,0,1.33597925158342,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0.323533699894818,0,0,0,0.585561594023094,4.1889341362691,0.255457055208591,0,0,0,9.13722900369418,6.40500843946077,3.64397621127307,15.6441888173049,13.2972037811772,14.3373750746096,9.5722345209977,0.305518091550949,0.124406970610093,0,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,1.05493372485001,0.748401490664606,1.2811372028485,1.59292931751539,3.10444044886819,0,0.378212160335639,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.492502392237286,0.162137619091711,0,0,0.402619256281115,5.04695876553905,2.98423375899925,0,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0,0.760902504450237,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0.72353147925725,0,0.287696137450811,0.162135226775035,1.09824565275233,0,1.11642284300551,1.24815069245824,2.02063102357689,2.51156378930677,3.85954817090694,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.0137647496948,3.7507739709505,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,6.42642632843614,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0.822745103010605,0.304464949114599,0,0,0.661585194164886,0.32977250588296,0,0.241251699712623,0.119372344003136,0.656563598980245,0,7.41701208042039,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.909188012978695,1.30877970992015,0,0,0,0,0.165458490457098,0.194451188344048,0.904118764344118,1.35164900392623,0.821500670520278,0.781226309063701,0.943734099831398,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0.772758376128762,0,0,0,0,25.9785847603851,21.6352861158373,22.3429250241365,17.7008777813998,13.7016503954128,13.5970901530146,11.4753825039407,15.3109209096235,11.7817026335893,12.9440077937955,0.103787347584177,0.399024873401031,0.853668028770671,1.21553358534147,2.09613162627982,1.2869045591501,2.22246727801615,0.824140228955577,1.60459604795908,0.505394423527595,1.2673964994512,1.13175804831646,1.40462261204824,1.85672941974121,1.26358031702349,1.42888107384922,1.39061191133827,0.77163688185482,1.64834360321323,1.32479028120958,1.37147700954166,1.06485483695602,2.14592570952589,1.16277133305863,1.41164070622996,1.35383372626682,1.46342378298218,0.526139422875686,1.35804113845862,0.561142271657738,0.711810108745045,0.985044823755635,1.22769312950907,1.39443157067369,2.70069255373598,1.74867404556562,1.40358965067245,0.859484216193193,0.956441660344217,1.10295709559758,0.695603506861264
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,3.1691570175309,0,0,0,0,0,0,0,1.14058573539325,1.08004750665353,0.841299845405528,4.57041575046086,4.8591079009355,1.10241719293459,0.191690942036473,1.83843757322004,4.40463523997555,13.5348578370299,7.52672012955593,1.18697658957174,1.55528994124096,1.56274011167028,1.95428099300967,5.06486349028512,5.04234217663473,10.3120004915784,9.5389026135399,6.71038004971082,0.151452386666368,1.66257432234928,0,2.58127163094416,0,4.31762553310254,3.89865850468601,1.79210754838934,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,1.48439043634778,0,1.33597925158342,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0.323533699894818,0,0,0,0.585561594023094,4.1889341362691,0.255457055208591,0,0,0,9.13722900369418,6.40500843946077,3.64397621127307,15.6441888173049,13.2972037811772,14.3373750746096,9.5722345209977,0.305518091550949,0.124406970610093,0,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,1.05493372485001,0.748401490664606,1.2811372028485,1.59292931751539,3.10444044886819,0,0.378212160335639,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.492502392237286,0.162137619091711,0,0,0.402619256281115,5.04695876553905,2.98423375899925,0,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0,0.760902504450237,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0.72353147925725,0,0.287696137450811,0.162135226775035,1.09824565275233,0,1.11642284300551,1.24815069245824,2.02063102357689,2.51156378930677,3.85954817090694,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.0137647496948,3.7507739709505,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,6.42642632843614,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0.822745103010605,0.304464949114599,0,0,0.661585194164886,0.32977250588296,0,0.241251699712623,0.119372344003136,0.656563598980245,0,7.41701208042039,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.909188012978695,1.30877970992015,0,0,0,0,0.165458490457098,0.194451188344048,0.904118764344118,1.35164900392623,0.821500670520278,0.781226309063701,0.943734099831398,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0.772758376128762,0,0,0,0,25.9785847603851,21.6352861158373,22.3429250241365,17.7008777813998,13.7016503954128,13.5970901530146,11.4753825039407,15.3109209096235,11.7817026335893,12.9440077937955,0.103787347584177,0.399024873401031,0.853668028770671,1.21553358534147,2.09613162627982,1.2869045591501,2.22246727801615,0.824140228955577,1.60459604795908,0.505394423527595,1.2673964994512,1.13175804831646,1.40462261204824,1.85672941974121,1.26358031702349,1.42888107384922,1.39061191133827,0.77163688185482,1.64834360321323,1.32479028120958,1.37147700954166,1.06485483695602,2.14592570952589,1.16277133305863,1.41164070622996,1.35383372626682,1.46342378298218,0.526139422875686,1.35804113845862,0.561142271657738,0.711810108745045,0.985044823755635,1.22769312950907,1.39443157067369,2.70069255373598,1.74867404556562,1.40358965067245,0.859484216193193,0.956441660344217,1.10295709559758,0.695603506861264
|short_description=p3@Necab1
|short_description=p3@Necab1
}}
}}

Latest revision as of 18:38, 26 September 2015

Short description:p3@Necab1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Necab1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 60bp_to_ENSMUST00000041606, NM_178617, uc008sbi.2_5end
EntrezGene:Necab1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Necab1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D515.64
cortex, neonate N30.CNhs11107.1392-42F213.30
diencephalon, adult.CNhs10482.20-12F214.34
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.42
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.25e-1423
neuroblast (sensu Vertebrata)1.25e-1423
neuron2.78e-0833
neuronal stem cell2.78e-0833
neuroblast2.78e-0833
electrically signaling cell2.78e-0833

Uber anatomy
Ontology termp-valuen
gray matter5.53e-2434
regional part of nervous system8.80e-2454
neural tube8.10e-2252
neural rod8.10e-2252
future spinal cord8.10e-2252
neural keel8.10e-2252
nervous system1.39e-1975
neurectoderm1.61e-1964
neural plate1.61e-1964
presumptive neural plate1.61e-1964
central nervous system2.19e-1973
brain grey matter6.14e-1929
regional part of telencephalon6.14e-1929
telencephalon6.14e-1929
brain3.34e-1747
future brain3.34e-1747
regional part of brain2.53e-1646
anterior neural tube9.83e-1640
ectoderm-derived structure1.39e-1595
ectoderm1.39e-1595
presumptive ectoderm1.39e-1595
ecto-epithelium2.02e-1573
pre-chordal neural plate3.93e-1549
regional part of forebrain7.91e-1539
forebrain7.91e-1539
future forebrain7.91e-1539
occipital lobe6.41e-1310
visual cortex6.41e-1310
neocortex6.41e-1310
cerebral cortex8.45e-1321
cerebral hemisphere8.45e-1321
pallium8.45e-1321
regional part of cerebral cortex6.80e-1217
structure with developmental contribution from neural crest3.09e-1092
tube1.08e-09114
anatomical conduit3.68e-08122
basal ganglion2.01e-078
nuclear complex of neuraxis2.01e-078
aggregate regional part of brain2.01e-078
collection of basal ganglia2.01e-078
cerebral subcortex2.01e-078
spinal cord2.15e-076
dorsal region element2.15e-076
dorsum2.15e-076
posterior neural tube8.14e-0712
chordal neural plate8.14e-0712
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