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FFCP PHASE1:Mm9::chr9:4796196..4796216,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14802
|EntrezGene=14802
|HGNC=
|HGNC=
|MCL_coexpression_id=281
|TSSclassifier=NA
|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069
|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069
|association_with_transcript=17bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end
|association_with_transcript=17bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end
|cluster_id=chr9:4796196..4796216,-
|description=CAGE_peak_4_at_Gria4_5end
|description=CAGE_peak_4_at_Gria4_5end
|id=chr9:4796196..4796216,-
|id=chr9:4796196..4796216,-
|ontology_enrichment_celltype=CL:0000540!2.84e-18!33;CL:0000047!2.84e-18!33;CL:0000031!2.84e-18!33;CL:0000404!2.84e-18!33;CL:0000393!2.53e-16!39;CL:0000211!2.53e-16!39;CL:0000221!5.23e-12!44;CL:0000133!5.23e-12!44;CL:0000117!8.43e-12!23;CL:0000337!8.43e-12!23;CL:0002319!1.35e-11!43;CL:0000055!3.39e-10!50;CL:0000107!1.91e-07!9
|ontology_enrichment_celltype=CL:0000540!2.84e-18!33;CL:0000047!2.84e-18!33;CL:0000031!2.84e-18!33;CL:0000404!2.84e-18!33;CL:0000393!2.53e-16!39;CL:0000211!2.53e-16!39;CL:0000221!5.23e-12!44;CL:0000133!5.23e-12!44;CL:0000117!8.43e-12!23;CL:0000337!8.43e-12!23;CL:0002319!1.35e-11!43;CL:0000055!3.39e-10!50;CL:0000107!1.91e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.30e-21,33;CL:0000047,1.30e-21,33;CL:0000031,1.30e-21,33;CL:0000404,1.30e-21,33;CL:0000393,1.90e-18,39;CL:0000211,1.90e-18,39;CL:0000221,3.47e-14,44;CL:0000133,3.47e-14,44;CL:0002319,1.18e-13,43;CL:0000117,3.11e-13,23;CL:0000337,3.11e-13,23;CL:0000107,2.50e-09,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.90e-28!73;UBERON:0005743!1.90e-28!73;UBERON:0004121!5.38e-28!102;UBERON:0000924!5.38e-28!102;UBERON:0006601!5.38e-28!102;UBERON:0000073!3.76e-27!75;UBERON:0001016!3.76e-27!75;UBERON:0002346!9.33e-25!71;UBERON:0003075!9.33e-25!71;UBERON:0007284!9.33e-25!71;UBERON:0000033!1.16e-20!63;UBERON:0001049!4.10e-19!52;UBERON:0005068!4.10e-19!52;UBERON:0006241!4.10e-19!52;UBERON:0007135!4.10e-19!52;UBERON:0000955!6.55e-18!50;UBERON:0006238!6.55e-18!50;UBERON:0002616!3.61e-17!49;UBERON:0003056!7.38e-17!49;UBERON:0002020!3.80e-15!34;UBERON:0003080!3.48e-14!40;UBERON:0002780!1.32e-13!39;UBERON:0001890!1.32e-13!39;UBERON:0006240!1.32e-13!39;UBERON:0002791!5.67e-12!29;UBERON:0003528!5.67e-12!29;UBERON:0001893!5.67e-12!29;UBERON:0007811!1.05e-08!86;UBERON:0000956!5.75e-08!21;UBERON:0001869!5.75e-08!21;UBERON:0000203!5.75e-08!21;UBERON:0000153!1.41e-07!94;UBERON:0002410!1.91e-07!9;UBERON:0002619!5.21e-07!17;UBERON:0002021!5.99e-07!10;UBERON:0000411!5.99e-07!10;UBERON:0001950!5.99e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.55e-32,73;UBERON:0001016,1.12e-30,75;UBERON:0004121,1.26e-28,95;UBERON:0000924,1.26e-28,95;UBERON:0006601,1.26e-28,95;UBERON:0002346,1.10e-26,64;UBERON:0003075,1.10e-26,64;UBERON:0007284,1.10e-26,64;UBERON:0010371,4.07e-23,73;UBERON:0000073,2.62e-22,54;UBERON:0001049,1.31e-20,52;UBERON:0005068,1.31e-20,52;UBERON:0006241,1.31e-20,52;UBERON:0007135,1.31e-20,52;UBERON:0002020,1.14e-17,34;UBERON:0010314,8.29e-17,92;UBERON:0003056,9.26e-17,49;UBERON:0000955,1.17e-16,47;UBERON:0006238,1.17e-16,47;UBERON:0002616,8.86e-16,46;UBERON:0003080,8.41e-14,40;UBERON:0003528,1.35e-13,29;UBERON:0002791,1.35e-13,29;UBERON:0001893,1.35e-13,29;UBERON:0002780,4.21e-13,39;UBERON:0001890,4.21e-13,39;UBERON:0006240,4.21e-13,39;UBERON:0002410,2.50e-09,9;UBERON:0002021,1.12e-08,10;UBERON:0000411,1.12e-08,10;UBERON:0001950,1.12e-08,10;UBERON:0000956,1.76e-08,21;UBERON:0001869,1.76e-08,21;UBERON:0000203,1.76e-08,21;UBERON:0002619,6.82e-08,17;UBERON:0003076,8.87e-08,12;UBERON:0003057,8.87e-08,12;UBERON:0000010,5.09e-07,11
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,1.31790010585369,2.0190142737785,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,5.66486090406874,6.34789175126439,6.33831403506179,0.338844532069132,0,0,0,0,0.599200221036809,0,2.28117147078651,1.21505344498522,0.630974884054146,12.2829923293636,9.49734726091938,3.79721477566358,2.20444583341944,0.919218786610021,8.8092704799511,16.5993539510744,17.5111447912118,4.2203612073662,5.12330804173494,4.68822033501084,11.1673199600552,9.00420176050688,10.6958773443767,12.9636577608414,16.7998583342941,12.1159639786445,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,3.23939865486365,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,2.08182392119363,0.608930956624282,0.922461989024234,0.452167921657868,1.05829836422134,0.376999773989026,0,0.86759614151947,0,0,0,0,0,20.4946557908083,37.4909605196085,0,0,0,0,10.0359728401231,8.6925114535539,4.27224797183739,12.3415267336516,12.2743419518559,8.93488591606108,7.94982189032012,1.73126918545538,0,0.252722758433675,1.26265113531884,0.390361328888111,1.60931473103431,2.52086981727489,2.26057226753573,3.6739709541717,2.94661556655154,3.84177070694888,2.58703370739016,0.431135985865684,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,1.03562886267751,0.234526059981096,0,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0,0,0.292399974850665,0.439100230582101,0,5.04695876553905,3.60166143327496,0,0,0.213288250535234,0.464473343720877,1.03093969057675,1.00841762311671,0.667134131534611,0.570676878337677,0,0.329397909448022,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0.398282546508734,2.0863469104839,3.08470984046268,1.1270773567308,2.24016460629846,2.71533482034676,2.31448205638051,2.08680572510049,0.590440591918409,0.156998727841375,0.740382983530803,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,11.559642479121,13.5965556446956,0,0.252470927204373,19.5615096038079,16.3984272604588,17.6647186140895,14.3381278771531,14.704712489438,17.2676683781188,9.71545684019746,10.2289550268959,11.8586333383957,20.8858855674175,0,1.42452482933804,2.44330439030364,0.824850614862677,0,0.242780636154981,0,0,0,0.307435147943927,1.03371317267288,0,0,0.316036757935816,0,0,6.46835250932197,0.36012218806262,0.129358683782755,0.428674070063185,0.886701168211368,2.67553226403106,3.1264313914403,0.913394847343798,0.23467170806371,0,0,0.16488625294148,0.807322133479528,0.241251699712623,0.596861720015682,0.164140899745061,0.291480836629851,14.0923229527987,0,0.82554747185289,0,0,0,0.228778173206523,0,0,0,0,1.42351197111511,1.01659733563424,1.62008011232702,0.209088296014469,0.436725127492355,0.674321731924103,1.1571483801547,0.523511883968059,0.129614973291793,0,0,0.598066184175915,1.48912641411388,2.33341426012857,1.29159823477731,2.19642963138012,1.76035857968631,0.5208175393758,0,0,0,0,0.405450430580328,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.772758376128762,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,6.21227026878773,8.28585425712918,9.73922372846974,6.53042092906013,14.3867329151835,12.8416962556249,7.42524750254986,7.65546045481175,8.15656336171568,12.9440077937955,0.518936737920883,1.99512436700516,1.87806966329548,0.486213434136588,0.838452650511929,1.65459157605013,2.44471400581777,0.618105171716683,1.60459604795908,1.51618327058278,1.2673964994512,1.50901073108861,1.77918864192777,2.4969809437899,2.92920891673628,0.952587382566147,1.85414921511769,1.73618298417335,1.23625770240992,0.588795680537589,1.37147700954166,1.95223386775271,1.43061713968393,1.59881058295561,1.78807822789128,2.28459441307527,1.82927972872773,2.63069711437843,1.90125759384206,1.12228454331548,1.54225523561426,1.57607171800902,2.04615521584845,2.47898945897546,1.73615949883027,1.99848462350357,0.701794825336225,0.859484216193193,0.57386499620653,0.441182838239031,0.463735671240843
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,1.31790010585369,2.0190142737785,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0.515672092277442,5.66486090406874,6.34789175126439,6.33831403506179,0.338844532069132,0,0,0,0,0.599200221036809,0,2.28117147078651,1.21505344498522,0.630974884054146,12.2829923293636,9.49734726091938,3.79721477566358,2.20444583341944,0.919218786610021,8.8092704799511,16.5993539510744,17.5111447912118,4.2203612073662,5.12330804173494,4.68822033501084,11.1673199600552,9.00420176050688,10.6958773443767,12.9636577608414,16.7998583342941,12.1159639786445,0,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,3.23939865486365,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,2.08182392119363,0.608930956624282,0.922461989024234,0.452167921657868,1.05829836422134,0.376999773989026,0,0.86759614151947,0,0,0,0,0,20.4946557908083,37.4909605196085,0,0,0,0,10.0359728401231,8.6925114535539,4.27224797183739,12.3415267336516,12.2743419518559,8.93488591606108,7.94982189032012,1.73126918545538,0,0.252722758433675,1.26265113531884,0.390361328888111,1.60931473103431,2.52086981727489,2.26057226753573,3.6739709541717,2.94661556655154,3.84177070694888,2.58703370739016,0.431135985865684,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,1.03562886267751,0.234526059981096,0,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0,0,0.292399974850665,0.439100230582101,0,5.04695876553905,3.60166143327496,0,0,0.213288250535234,0.464473343720877,1.03093969057675,1.00841762311671,0.667134131534611,0.570676878337677,0,0.329397909448022,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0.398282546508734,2.0863469104839,3.08470984046268,1.1270773567308,2.24016460629846,2.71533482034676,2.31448205638051,2.08680572510049,0.590440591918409,0.156998727841375,0.740382983530803,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,11.559642479121,13.5965556446956,0,0.252470927204373,19.5615096038079,16.3984272604588,17.6647186140895,14.3381278771531,14.704712489438,17.2676683781188,9.71545684019746,10.2289550268959,11.8586333383957,20.8858855674175,0,1.42452482933804,2.44330439030364,0.824850614862677,0,0.242780636154981,0,0,0,0.307435147943927,1.03371317267288,0,0,0.316036757935816,0,0,6.46835250932197,0.36012218806262,0.129358683782755,0.428674070063185,0.886701168211368,2.67553226403106,3.1264313914403,0.913394847343798,0.23467170806371,0,0,0.16488625294148,0.807322133479528,0.241251699712623,0.596861720015682,0.164140899745061,0.291480836629851,14.0923229527987,0,0.82554747185289,0,0,0,0.228778173206523,0,0,0,0,1.42351197111511,1.01659733563424,1.62008011232702,0.209088296014469,0.436725127492355,0.674321731924103,1.1571483801547,0.523511883968059,0.129614973291793,0,0,0.598066184175915,1.48912641411388,2.33341426012857,1.29159823477731,2.19642963138012,1.76035857968631,0.5208175393758,0,0,0,0,0.405450430580328,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.772758376128762,0.375364950902364,0.183151624267265,0.214368379079066,0.501572104035363,6.21227026878773,8.28585425712918,9.73922372846974,6.53042092906013,14.3867329151835,12.8416962556249,7.42524750254986,7.65546045481175,8.15656336171568,12.9440077937955,0.518936737920883,1.99512436700516,1.87806966329548,0.486213434136588,0.838452650511929,1.65459157605013,2.44471400581777,0.618105171716683,1.60459604795908,1.51618327058278,1.2673964994512,1.50901073108861,1.77918864192777,2.4969809437899,2.92920891673628,0.952587382566147,1.85414921511769,1.73618298417335,1.23625770240992,0.588795680537589,1.37147700954166,1.95223386775271,1.43061713968393,1.59881058295561,1.78807822789128,2.28459441307527,1.82927972872773,2.63069711437843,1.90125759384206,1.12228454331548,1.54225523561426,1.57607171800902,2.04615521584845,2.47898945897546,1.73615949883027,1.99848462350357,0.701794825336225,0.859484216193193,0.57386499620653,0.441182838239031,0.463735671240843
|short_description=p4@Gria4
|short_description=p4@Gria4
}}
}}

Latest revision as of 18:45, 26 September 2015

Short description:p4@Gria4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Gria4_5end
Coexpression cluster:MCL_coexpression_mm9:281
Association with transcript: 17bp_to_ENSMUST00000027020, ENSMUST00000063508, ENSMUST00000163309, NM_001113180, NM_001113181, NM_019691, uc009obp.2, uc009obq.2, uc012gnm.1_5end
EntrezGene:Gria4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Gria4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B220.49
cerebellum, neonate N30.CNhs11135.1395-42I237.49
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.04
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D512.34
cortex, neonate N30.CNhs11107.1392-42F212.27
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B27.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C63.67
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.56
medulla oblongata, neonate N30.CNhs11200.1396-42A313.60
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.56
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.34
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I920.89
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C914.09
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.55e-3273
nervous system1.12e-3075
ectoderm-derived structure1.26e-2895
ectoderm1.26e-2895
presumptive ectoderm1.26e-2895
neurectoderm1.10e-2664
neural plate1.10e-2664
presumptive neural plate1.10e-2664
ecto-epithelium4.07e-2373
regional part of nervous system2.62e-2254
neural tube1.31e-2052
neural rod1.31e-2052
future spinal cord1.31e-2052
neural keel1.31e-2052
gray matter1.14e-1734
structure with developmental contribution from neural crest8.29e-1792
pre-chordal neural plate9.26e-1749
brain1.17e-1647
future brain1.17e-1647
regional part of brain8.86e-1646
anterior neural tube8.41e-1440
brain grey matter1.35e-1329
regional part of telencephalon1.35e-1329
telencephalon1.35e-1329
regional part of forebrain4.21e-1339
forebrain4.21e-1339
future forebrain4.21e-1339
autonomic nervous system2.50e-099
occipital lobe1.12e-0810
visual cortex1.12e-0810
neocortex1.12e-0810
cerebral cortex1.76e-0821
cerebral hemisphere1.76e-0821
pallium1.76e-0821
regional part of cerebral cortex6.82e-0817
posterior neural tube8.87e-0812
chordal neural plate8.87e-0812
peripheral nervous system5.09e-0711
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