FFCP PHASE1:Mm9::chr17:70871052..70871078,+: Difference between revisions
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{{FFCP|EntrezGene=224997|HGNC=|MCL_coexpression_id=328|UniProt=|association_with_transcript=-338bp_to_ENSMUST00000156946_5end|description=CAGE_peak_13_at_Dlgap1_5end|id=chr17:70871052..70871078,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!3.33e-33!50;UBERON:0006238!3.33e-33!50;UBERON:0002616!1.75e-31!49;UBERON:0000033!1.71e-30!63;UBERON:0002791!2.71e-29!29;UBERON:0003528!2.71e-29!29;UBERON:0001893!2.71e-29!29;UBERON:0001049!7.99e-29!52;UBERON:0005068!7.99e-29!52;UBERON:0006241!7.99e-29!52;UBERON:0007135!7.99e-29!52;UBERON:0002020!1.33e-26!34;UBERON:0003080!2.28e-26!40;UBERON:0003056!3.91e-26!49;UBERON:0002346!1.20e-25!71;UBERON:0003075!1.20e-25!71;UBERON:0007284!1.20e-25!71;UBERON:0002780!6.21e-25!39;UBERON:0001890!6.21e-25!39;UBERON:0006240!6.21e-25!39;UBERON:0000956!6.95e-25!21;UBERON:0001869!6.95e-25!21;UBERON:0000203!6.95e-25!21;UBERON:0001017!1.21e-23!73;UBERON:0005743!1.21e-23!73;UBERON:0000073!8.35e-23!75;UBERON:0001016!8.35e-23!75;UBERON:0002021!1.20e-22!10;UBERON:0000411!1.20e-22!10;UBERON:0001950!1.20e-22!10;UBERON:0002619!5.60e-21!17;UBERON:0004121!5.87e-21!102;UBERON:0000924!5.87e-21!102;UBERON:0006601!5.87e-21!102;UBERON:0007811!3.23e-20!86;UBERON:0000153!8.02e-18!94;UBERON:0000025!3.75e-10!114;UBERON:0000064!1.04e-09!99;UBERON:0004111!5.10e-09!122|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.16e-44,10;UBERON:0000411,1.16e-44,10;UBERON:0001950,1.16e-44,10;UBERON:0002619,2.36e-31,17;UBERON:0000956,5.39e-30,21;UBERON:0001869,5.39e-30,21;UBERON:0000203,5.39e-30,21;UBERON:0003528,7.58e-25,29;UBERON:0002791,7.58e-25,29;UBERON:0001893,7.58e-25,29;UBERON:0000955,3.33e-22,47;UBERON:0006238,3.33e-22,47;UBERON:0000073,1.16e-21,54;UBERON:0002020,6.90e-21,34;UBERON:0002780,8.43e-21,39;UBERON:0001890,8.43e-21,39;UBERON:0006240,8.43e-21,39;UBERON:0003080,3.18e-20,40;UBERON:0002616,6.37e-20,46;UBERON:0001017,2.34e-17,73;UBERON:0001049,2.40e-17,52;UBERON:0005068,2.40e-17,52;UBERON:0006241,2.40e-17,52;UBERON:0007135,2.40e-17,52;UBERON:0001016,8.03e-17,75;UBERON:0003056,4.30e-16,49;UBERON:0002346,1.23e-13,64;UBERON:0003075,1.23e-13,64;UBERON:0007284,1.23e-13,64;UBERON:0004121,1.07e-12,95;UBERON:0000924,1.07e-12,95;UBERON:0006601,1.07e-12,95;UBERON:0010371,1.19e-11,73;UBERON:0010314,1.01e-08,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.420649922702764,0,0,0,0,0,0,4.08599481872601,4.30098293117482,0,0.0914876436024097,0,0.279182999001381,0,3.20876320331301,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,2.92780797011547,0.41889341362691,0,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,10.2556348913443,7.16003280524926,0.62336413367868,1.46017136760982,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.49653351908,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34177395402186,7.36520378411483,5.72895513439397,7.56154002312225,10.9613203163303,13.5970901530146,11.4753825039407,9.90706647093285,9.9691329976525,7.24864436452548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p13@Dlgap1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224997 | |||
|HGNC= | |||
|MCL_coexpression_id=328 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-338bp_to_ENSMUST00000156946_5end | |||
|cluster_id=chr17:70871052..70871078,+ | |||
|description=CAGE_peak_13_at_Dlgap1_5end | |||
|id=chr17:70871052..70871078,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.33e-33!50;UBERON:0006238!3.33e-33!50;UBERON:0002616!1.75e-31!49;UBERON:0000033!1.71e-30!63;UBERON:0002791!2.71e-29!29;UBERON:0003528!2.71e-29!29;UBERON:0001893!2.71e-29!29;UBERON:0001049!7.99e-29!52;UBERON:0005068!7.99e-29!52;UBERON:0006241!7.99e-29!52;UBERON:0007135!7.99e-29!52;UBERON:0002020!1.33e-26!34;UBERON:0003080!2.28e-26!40;UBERON:0003056!3.91e-26!49;UBERON:0002346!1.20e-25!71;UBERON:0003075!1.20e-25!71;UBERON:0007284!1.20e-25!71;UBERON:0002780!6.21e-25!39;UBERON:0001890!6.21e-25!39;UBERON:0006240!6.21e-25!39;UBERON:0000956!6.95e-25!21;UBERON:0001869!6.95e-25!21;UBERON:0000203!6.95e-25!21;UBERON:0001017!1.21e-23!73;UBERON:0005743!1.21e-23!73;UBERON:0000073!8.35e-23!75;UBERON:0001016!8.35e-23!75;UBERON:0002021!1.20e-22!10;UBERON:0000411!1.20e-22!10;UBERON:0001950!1.20e-22!10;UBERON:0002619!5.60e-21!17;UBERON:0004121!5.87e-21!102;UBERON:0000924!5.87e-21!102;UBERON:0006601!5.87e-21!102;UBERON:0007811!3.23e-20!86;UBERON:0000153!8.02e-18!94;UBERON:0000025!3.75e-10!114;UBERON:0000064!1.04e-09!99;UBERON:0004111!5.10e-09!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.16e-44,10;UBERON:0000411,1.16e-44,10;UBERON:0001950,1.16e-44,10;UBERON:0002619,2.36e-31,17;UBERON:0000956,5.39e-30,21;UBERON:0001869,5.39e-30,21;UBERON:0000203,5.39e-30,21;UBERON:0003528,7.58e-25,29;UBERON:0002791,7.58e-25,29;UBERON:0001893,7.58e-25,29;UBERON:0000955,3.33e-22,47;UBERON:0006238,3.33e-22,47;UBERON:0000073,1.16e-21,54;UBERON:0002020,6.90e-21,34;UBERON:0002780,8.43e-21,39;UBERON:0001890,8.43e-21,39;UBERON:0006240,8.43e-21,39;UBERON:0003080,3.18e-20,40;UBERON:0002616,6.37e-20,46;UBERON:0001017,2.34e-17,73;UBERON:0001049,2.40e-17,52;UBERON:0005068,2.40e-17,52;UBERON:0006241,2.40e-17,52;UBERON:0007135,2.40e-17,52;UBERON:0001016,8.03e-17,75;UBERON:0003056,4.30e-16,49;UBERON:0002346,1.23e-13,64;UBERON:0003075,1.23e-13,64;UBERON:0007284,1.23e-13,64;UBERON:0004121,1.07e-12,95;UBERON:0000924,1.07e-12,95;UBERON:0006601,1.07e-12,95;UBERON:0010371,1.19e-11,73;UBERON:0010314,1.01e-08,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.420649922702764,0,0,0,0,0,0,4.08599481872601,4.30098293117482,0,0.0914876436024097,0,0.279182999001381,0,3.20876320331301,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,2.92780797011547,0.41889341362691,0,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,10.2556348913443,7.16003280524926,0.62336413367868,1.46017136760982,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.49653351908,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34177395402186,7.36520378411483,5.72895513439397,7.56154002312225,10.9613203163303,13.5970901530146,11.4753825039407,9.90706647093285,9.9691329976525,7.24864436452548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p13@Dlgap1 | |||
}} |
Latest revision as of 19:57, 26 September 2015
Short description: | p13@Dlgap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Dlgap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:328 |
Association with transcript: | -338bp_to_ENSMUST00000156946_5end |
EntrezGene: | Dlgap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.16e-44 | 10 |
visual cortex | 1.16e-44 | 10 |
neocortex | 1.16e-44 | 10 |
regional part of cerebral cortex | 2.36e-31 | 17 |
cerebral cortex | 5.39e-30 | 21 |
cerebral hemisphere | 5.39e-30 | 21 |
pallium | 5.39e-30 | 21 |
brain grey matter | 7.58e-25 | 29 |
regional part of telencephalon | 7.58e-25 | 29 |
telencephalon | 7.58e-25 | 29 |
brain | 3.33e-22 | 47 |
future brain | 3.33e-22 | 47 |
regional part of nervous system | 1.16e-21 | 54 |
gray matter | 6.90e-21 | 34 |
regional part of forebrain | 8.43e-21 | 39 |
forebrain | 8.43e-21 | 39 |
future forebrain | 8.43e-21 | 39 |
anterior neural tube | 3.18e-20 | 40 |
regional part of brain | 6.37e-20 | 46 |
central nervous system | 2.34e-17 | 73 |
neural tube | 2.40e-17 | 52 |
neural rod | 2.40e-17 | 52 |
future spinal cord | 2.40e-17 | 52 |
neural keel | 2.40e-17 | 52 |
nervous system | 8.03e-17 | 75 |
pre-chordal neural plate | 4.30e-16 | 49 |
neurectoderm | 1.23e-13 | 64 |
neural plate | 1.23e-13 | 64 |
presumptive neural plate | 1.23e-13 | 64 |
ectoderm-derived structure | 1.07e-12 | 95 |
ectoderm | 1.07e-12 | 95 |
presumptive ectoderm | 1.07e-12 | 95 |
ecto-epithelium | 1.19e-11 | 73 |
structure with developmental contribution from neural crest | 1.01e-08 | 92 |