FFCP PHASE1:Mm9::chr11:106021415..106021482,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:106021415..106021482,-
|short_description=p1@LOC632329,p1@Limd2
|description=CAGE_peak_1_at_LOC632329_5end,CAGE_peak_1_at_Limd2_5end
|association_with_tra...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=632329,67803 | |EntrezGene=632329,67803 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGB5,B1AR88 | |UniProt=Q8BGB5,B1AR88 | ||
|association_with_transcript=0bp_to_ENSMUST00000045923,NM_172397,uc007lyd.1_5end | |||
|cluster_id=chr11:106021415..106021482,- | |||
|description=CAGE_peak_1_at_LOC632329_5end,CAGE_peak_1_at_Limd2_5end | |||
|id=chr11:106021415..106021482,- | |||
|ontology_enrichment_celltype=CL:0000988!1.80e-10!32;CL:0002032!1.80e-10!32;CL:0000037!1.80e-10!32;CL:0000566!1.80e-10!32;CL:0000837!1.80e-10!32;CL:0000738!1.83e-10!17;CL:0002087!1.83e-10!17;CL:0000542!1.50e-08!13;CL:0000051!1.50e-08!13;CL:0000838!2.84e-08!12;CL:0002031!9.91e-08!25;CL:0000084!1.17e-07!11;CL:0000827!1.17e-07!11;CL:0000219!3.03e-07!54;CL:0002320!3.41e-07!46;CL:0000134!3.41e-07!46;CL:0000791!7.34e-07!9;CL:0000789!7.34e-07!9;CL:0002420!7.34e-07!9;CL:0002419!7.34e-07!9;CL:0000790!7.34e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.80e-10,32;CL:0002032,1.80e-10,32;CL:0000037,1.80e-10,32;CL:0000837,1.80e-10,32;CL:0000738,1.83e-10,17;CL:0002087,1.83e-10,17;CL:0000542,1.50e-08,13;CL:0000051,1.50e-08,13;CL:0000838,2.84e-08,12;CL:0002031,9.91e-08,25;CL:0000084,1.17e-07,11;CL:0000827,1.17e-07,11;CL:0000219,3.03e-07,54;CL:0002320,3.41e-07,46;CL:0000134,3.41e-07,46;CL:0000791,7.34e-07,9;CL:0000789,7.34e-07,9;CL:0002420,7.34e-07,9;CL:0002419,7.34e-07,9;CL:0000790,7.34e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.31e-19!48;UBERON:0002390!5.48e-19!45;UBERON:0003061!5.48e-19!45;UBERON:0000065!7.99e-13!41;UBERON:0001004!1.38e-12!42;UBERON:0004177!1.39e-12!29;UBERON:0002405!1.77e-11!70;UBERON:0002370!9.73e-11!23;UBERON:0000974!9.73e-11!23;UBERON:0004807!9.73e-11!23;UBERON:0005058!9.73e-11!23;UBERON:0003351!9.73e-11!23;UBERON:0009113!9.73e-11!23;UBERON:0003295!9.73e-11!23;UBERON:0009722!9.73e-11!23;UBERON:0005562!9.73e-11!23;UBERON:0007690!9.73e-11!23;UBERON:0003408!2.21e-10!24;UBERON:0000072!6.66e-10!27;UBERON:0006562!1.85e-09!24;UBERON:0001557!1.85e-09!24;UBERON:0001042!1.85e-09!24;UBERON:0008814!1.85e-09!24;UBERON:0009145!1.85e-09!24;UBERON:0003081!1.26e-08!88;UBERON:0002371!3.36e-07!16;UBERON:0002384!3.41e-07!46;UBERON:0001474!7.15e-07!22;UBERON:0004765!7.15e-07!22;UBERON:0001434!7.15e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.31e-19,48;UBERON:0002405,1.31e-19,48;UBERON:0002390,5.47e-19,45;UBERON:0003061,5.47e-19,45;UBERON:0000065,7.99e-13,41;UBERON:0001004,1.38e-12,42;UBERON:0004177,1.39e-12,29;UBERON:0005057,1.39e-12,29;UBERON:0002370,9.73e-11,23;UBERON:0000974,9.73e-11,23;UBERON:0004807,9.73e-11,23;UBERON:0005058,9.73e-11,23;UBERON:0003351,9.73e-11,23;UBERON:0009113,9.73e-11,23;UBERON:0003295,9.73e-11,23;UBERON:0009722,9.73e-11,23;UBERON:0005562,9.73e-11,23;UBERON:0007690,9.73e-11,23;UBERON:0003408,2.21e-10,24;UBERON:0000072,6.66e-10,27;UBERON:0006562,1.85e-09,24;UBERON:0001557,1.85e-09,24;UBERON:0001042,1.85e-09,24;UBERON:0008814,1.85e-09,24;UBERON:0009145,1.85e-09,24;UBERON:0000077,1.20e-08,35;UBERON:0003081,2.94e-08,87;UBERON:0000153,3.89e-08,43;UBERON:0002371,3.36e-07,16;UBERON:0002384,3.41e-07,46;UBERON:0007811,4.66e-07,36;UBERON:0001474,7.15e-07,22;UBERON:0004765,7.15e-07,22;UBERON:0001434,7.15e-07,22 | |||
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| ||
|short_description=p1@LOC632329,p1@Limd2 | |||
}} | }} |
Latest revision as of 20:04, 26 September 2015
Short description: | p1@LOC632329, p1@Limd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC632329_5end, CAGE_peak_1_at_Limd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000045923, NM_172397, uc007lyd.1_5end |
EntrezGene: | 632329,67803 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.80e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.80e-10 | 32 |
hematopoietic stem cell | 1.80e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.80e-10 | 32 |
leukocyte | 1.83e-10 | 17 |
nongranular leukocyte | 1.83e-10 | 17 |
lymphocyte | 1.50e-08 | 13 |
common lymphoid progenitor | 1.50e-08 | 13 |
lymphoid lineage restricted progenitor cell | 2.84e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 9.91e-08 | 25 |
T cell | 1.17e-07 | 11 |
pro-T cell | 1.17e-07 | 11 |
motile cell | 3.03e-07 | 54 |
connective tissue cell | 3.41e-07 | 46 |
mesenchymal cell | 3.41e-07 | 46 |
mature alpha-beta T cell | 7.34e-07 | 9 |
alpha-beta T cell | 7.34e-07 | 9 |
immature T cell | 7.34e-07 | 9 |
mature T cell | 7.34e-07 | 9 |
immature alpha-beta T cell | 7.34e-07 | 9 |