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FFCP PHASE1:Mm9::chr2:65683890..65683907,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=77771
|EntrezGene=77771
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P59055
|UniProt=P59055
|association_with_transcript=0bp_to_ENSMUST00000053910,ENSMUST00000139896_5end
|association_with_transcript=0bp_to_ENSMUST00000053910,ENSMUST00000139896_5end
|cluster_id=chr2:65683890..65683907,+
|description=CAGE_peak_1_at_Csrnp3_5end
|description=CAGE_peak_1_at_Csrnp3_5end
|id=chr2:65683890..65683907,+
|id=chr2:65683890..65683907,+
|ontology_enrichment_celltype=CL:0000117!6.65e-13!23;CL:0000337!6.65e-13!23;CL:0000540!2.65e-12!33;CL:0000047!2.65e-12!33;CL:0000031!2.65e-12!33;CL:0000404!2.65e-12!33;CL:0000393!7.77e-08!39;CL:0000211!7.77e-08!39;CL:0002319!1.40e-07!43;CL:0000221!1.70e-07!44;CL:0000133!1.70e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,4.89e-14,23;CL:0000337,4.89e-14,23;CL:0000540,7.11e-13,33;CL:0000047,7.11e-13,33;CL:0000031,7.11e-13,33;CL:0000404,7.11e-13,33;CL:0000393,8.00e-09,39;CL:0000211,8.00e-09,39;CL:0002319,7.00e-07,43;CL:0000221,8.25e-07,44;CL:0000133,8.25e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.53e-24!71;UBERON:0003075!1.53e-24!71;UBERON:0007284!1.53e-24!71;UBERON:0001017!3.28e-23!73;UBERON:0005743!3.28e-23!73;UBERON:0000033!1.69e-22!63;UBERON:0000073!1.73e-22!75;UBERON:0001016!1.73e-22!75;UBERON:0001049!6.77e-22!52;UBERON:0005068!6.77e-22!52;UBERON:0006241!6.77e-22!52;UBERON:0007135!6.77e-22!52;UBERON:0004121!1.99e-21!102;UBERON:0000924!1.99e-21!102;UBERON:0006601!1.99e-21!102;UBERON:0003056!5.39e-21!49;UBERON:0000955!5.76e-21!50;UBERON:0006238!5.76e-21!50;UBERON:0002616!3.36e-20!49;UBERON:0002020!7.46e-19!34;UBERON:0003080!4.46e-18!40;UBERON:0002780!2.33e-17!39;UBERON:0001890!2.33e-17!39;UBERON:0006240!2.33e-17!39;UBERON:0002791!3.99e-16!29;UBERON:0003528!3.99e-16!29;UBERON:0001893!3.99e-16!29;UBERON:0000153!2.03e-11!94;UBERON:0000956!3.09e-11!21;UBERON:0001869!3.09e-11!21;UBERON:0000203!3.09e-11!21;UBERON:0007811!4.97e-10!86;UBERON:0002619!1.21e-09!17;UBERON:0000468!2.28e-08!333;UBERON:0002021!4.25e-08!10;UBERON:0000411!4.25e-08!10;UBERON:0001950!4.25e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.97e-26,64;UBERON:0003075,2.97e-26,64;UBERON:0007284,2.97e-26,64;UBERON:0000073,1.17e-23,54;UBERON:0001017,1.35e-23,73;UBERON:0001049,2.26e-22,52;UBERON:0005068,2.26e-22,52;UBERON:0006241,2.26e-22,52;UBERON:0007135,2.26e-22,52;UBERON:0001016,3.71e-22,75;UBERON:0010371,5.49e-22,73;UBERON:0003056,1.65e-21,49;UBERON:0004121,1.66e-20,95;UBERON:0000924,1.66e-20,95;UBERON:0006601,1.66e-20,95;UBERON:0002020,1.33e-19,34;UBERON:0000955,1.68e-19,47;UBERON:0006238,1.68e-19,47;UBERON:0002616,1.08e-18,46;UBERON:0003080,2.72e-18,40;UBERON:0002780,1.61e-17,39;UBERON:0001890,1.61e-17,39;UBERON:0006240,1.61e-17,39;UBERON:0003528,1.29e-16,29;UBERON:0002791,1.29e-16,29;UBERON:0001893,1.29e-16,29;UBERON:0010314,7.32e-16,92;UBERON:0000956,2.73e-11,21;UBERON:0001869,2.73e-11,21;UBERON:0000203,2.73e-11,21;UBERON:0002619,1.57e-09,17;UBERON:0002021,9.40e-09,10;UBERON:0000411,9.40e-09,10;UBERON:0001950,9.40e-09,10
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2902381082794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,34.5961148069912,38.6163414868584,27.8885817542719,0,0,0,0,0,0,0.384218305321555,17.5235444801327,11.8805225731888,16.8259969081106,19.1386159550548,18.3320888989839,41.5243809338694,31.0539326099086,21.1420320920305,31.9336054898227,28.3465890549117,36.2511418484735,42.863043512313,44.9204330087831,55.2168172790166,19.5428099300967,43.3327209724394,37.1299742097649,37.4178303551558,45.2741944941147,36.7206908275842,0.151452386666368,0.68014404096107,0,0,0,0,0,0,1.26399978118577,0,0,0,1.12674735821344,0,0,0,0,0,0,1.59857431606684,0,0.148442139064825,4.51061849591953,2.74018930480927,2.30615497256059,2.26083960828934,3.52766121407114,0.251333182659351,0,0.289198713839823,0,5.50007289821191,4.19598885074748,8.727754556434,0,19.6163133997737,15.7085030110091,0.255457055208591,0,0,0,62.0133247135966,59.0175777636028,76.2721917325087,58.0573229442203,57.5359778993244,48.6224024269371,56.4599595475797,2.54598409625791,5.22509276562391,0.252722758433675,6.73413938836717,11.0602376518298,6.20735681970377,9.72335500948886,12.3577950625286,19.0502197623718,20.3700815252911,19.6773621575431,19.1440494346872,11.6406716183735,25.15110866232,17.067259043903,4.82230611340665,12.7901734643775,8.00979983000983,8.23128545631774,9.15557627365069,0,0,0,1.86413195281952,2.11073453982987,1.08037236876609,0.473489471170421,0.590292695242212,1.07986979021165,0.465067889500816,1.07309360559848,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0,0,58.2503157522632,63.9037642875356,0,0.264450566663544,9.81125952462076,10.4506502337197,4.63922860759536,1.61346819698674,2.44615848229357,1.33157938278791,0.474529061544512,0.823494773620054,1.50801125280162,1.1937388322469,1.55971269695296,0.898819408654221,0.216138049874694,0.199141273254367,1.32767530667157,5.02693455482807,2.25415471346161,3.66572390121566,3.10323979468201,2.94570443539338,2.90888070771584,0,0.470996183524124,0.246794327843601,0,0.83422552858047,0.982794975566015,0,0.405720242777006,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,1.89491411770485,1.62964976442026,0.848725428875941,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0.472905432318573,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,32.1101179975584,36.4528345301752,0,2.01976741763498,4.41711507182759,3.90438744296638,7.97066571611356,1.43381278771531,2.00518806674155,2.83076530788832,0.809621403349789,3.79932615284705,3.95287777946523,82.9008996368262,7.80670468645477,1.6025904330053,4.56083486190013,7.4236555337641,0,2.91336763385978,1.209294227859,1.32023555829129,0.590603785761546,2.15204603560749,1.80899805217755,1.09060118843252,0.356497378384721,0.948110273807448,0,0,26.5542892487955,7.92268813737765,0.776152102696527,3.64372959553707,3.54680467284547,3.0322698992352,6.41741180348272,1.522324745573,0.23467170806371,0,0,0.49465875882444,1.45317984026315,1.26657142349127,0.477489376012546,0.656563598980245,0.874442509889552,30.5951748317341,0,1.03193433981611,0.370389054739423,0,0,0,0,0,0,0,7.27572785236611,4.47302827679067,2.80813886136683,2.29997125615916,2.40198820120795,1.21377911746339,0.826534557253359,0.785267825952089,0.648074866458964,0,0,1.79419855252775,1.65458490457098,1.94451188344048,1.6790777052105,1.520605129417,3.0512882047896,1.43224823328345,0.524296722128554,0,0,0,0.405450430580328,1.33524244314275,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,2.62755465631655,15.0184331899157,0.428736758158132,1.50471631210609,80.7595134942405,53.3977274348325,60.726924424576,49.6655696973257,60.2872617398165,51.3667850224996,60.7520250208625,62.5946472481666,65.2525068937255,54.8825930456929,6.84996494055566,15.5619700626402,18.2684958156924,12.8846560046196,10.4806581313991,11.0306105070008,16.4462578573195,15.658664350156,18.2923949467335,14.9091354940641,17.997030292207,16.4104917005886,12.9225280308438,15.6221371867881,14.7609155215926,17.6228665774737,16.2238056322798,14.0823730938505,13.5988347265091,16.1918812147837,11.6575545811041,15.6178709420217,13.5908628269973,16.1334522461885,14.5869539643762,17.7690676572521,16.097661612804,12.8904158604543,14.1236278399696,17.9565526930476,13.4057570480317,11.3280154731898,12.2769312950907,13.789378865551,11.3814900478873,25.2308683717325,13.3341016813883,12.4625211348013,9.75570493551101,3.30887128679273,5.79669589051054
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2902381082794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,34.5961148069912,38.6163414868584,27.8885817542719,0,0,0,0,0,0,0.384218305321555,17.5235444801327,11.8805225731888,16.8259969081106,19.1386159550548,18.3320888989839,41.5243809338694,31.0539326099086,21.1420320920305,31.9336054898227,28.3465890549117,36.2511418484735,42.863043512313,44.9204330087831,55.2168172790166,19.5428099300967,43.3327209724394,37.1299742097649,37.4178303551558,45.2741944941147,36.7206908275842,0.151452386666368,0.68014404096107,0,0,0,0,0,0,1.26399978118577,0,0,0,1.12674735821344,0,0,0,0,0,0,1.59857431606684,0,0.148442139064825,4.51061849591953,2.74018930480927,2.30615497256059,2.26083960828934,3.52766121407114,0.251333182659351,0,0.289198713839823,0,5.50007289821191,4.19598885074748,8.727754556434,0,19.6163133997737,15.7085030110091,0.255457055208591,0,0,0,62.0133247135966,59.0175777636028,76.2721917325087,58.0573229442203,57.5359778993244,48.6224024269371,56.4599595475797,2.54598409625791,5.22509276562391,0.252722758433675,6.73413938836717,11.0602376518298,6.20735681970377,9.72335500948886,12.3577950625286,19.0502197623718,20.3700815252911,19.6773621575431,19.1440494346872,11.6406716183735,25.15110866232,17.067259043903,4.82230611340665,12.7901734643775,8.00979983000983,8.23128545631774,9.15557627365069,0,0,0,1.86413195281952,2.11073453982987,1.08037236876609,0.473489471170421,0.590292695242212,1.07986979021165,0.465067889500816,1.07309360559848,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0,0,58.2503157522632,63.9037642875356,0,0.264450566663544,9.81125952462076,10.4506502337197,4.63922860759536,1.61346819698674,2.44615848229357,1.33157938278791,0.474529061544512,0.823494773620054,1.50801125280162,1.1937388322469,1.55971269695296,0.898819408654221,0.216138049874694,0.199141273254367,1.32767530667157,5.02693455482807,2.25415471346161,3.66572390121566,3.10323979468201,2.94570443539338,2.90888070771584,0,0.470996183524124,0.246794327843601,0,0.83422552858047,0.982794975566015,0,0.405720242777006,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,1.89491411770485,1.62964976442026,0.848725428875941,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0.472905432318573,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,32.1101179975584,36.4528345301752,0,2.01976741763498,4.41711507182759,3.90438744296638,7.97066571611356,1.43381278771531,2.00518806674155,2.83076530788832,0.809621403349789,3.79932615284705,3.95287777946523,82.9008996368262,7.80670468645477,1.6025904330053,4.56083486190013,7.4236555337641,0,2.91336763385978,1.209294227859,1.32023555829129,0.590603785761546,2.15204603560749,1.80899805217755,1.09060118843252,0.356497378384721,0.948110273807448,0,0,26.5542892487955,7.92268813737765,0.776152102696527,3.64372959553707,3.54680467284547,3.0322698992352,6.41741180348272,1.522324745573,0.23467170806371,0,0,0.49465875882444,1.45317984026315,1.26657142349127,0.477489376012546,0.656563598980245,0.874442509889552,30.5951748317341,0,1.03193433981611,0.370389054739423,0,0,0,0,0,0,0,7.27572785236611,4.47302827679067,2.80813886136683,2.29997125615916,2.40198820120795,1.21377911746339,0.826534557253359,0.785267825952089,0.648074866458964,0,0,1.79419855252775,1.65458490457098,1.94451188344048,1.6790777052105,1.520605129417,3.0512882047896,1.43224823328345,0.524296722128554,0,0,0,0.405450430580328,1.33524244314275,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,2.62755465631655,15.0184331899157,0.428736758158132,1.50471631210609,80.7595134942405,53.3977274348325,60.726924424576,49.6655696973257,60.2872617398165,51.3667850224996,60.7520250208625,62.5946472481666,65.2525068937255,54.8825930456929,6.84996494055566,15.5619700626402,18.2684958156924,12.8846560046196,10.4806581313991,11.0306105070008,16.4462578573195,15.658664350156,18.2923949467335,14.9091354940641,17.997030292207,16.4104917005886,12.9225280308438,15.6221371867881,14.7609155215926,17.6228665774737,16.2238056322798,14.0823730938505,13.5988347265091,16.1918812147837,11.6575545811041,15.6178709420217,13.5908628269973,16.1334522461885,14.5869539643762,17.7690676572521,16.097661612804,12.8904158604543,14.1236278399696,17.9565526930476,13.4057570480317,11.3280154731898,12.2769312950907,13.789378865551,11.3814900478873,25.2308683717325,13.3341016813883,12.4625211348013,9.75570493551101,3.30887128679273,5.79669589051054
|short_description=p1@Csrnp3
|short_description=p1@Csrnp3
}}
}}

Latest revision as of 20:48, 26 September 2015

Short description:p1@Csrnp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Csrnp3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000053910, ENSMUST00000139896_5end
EntrezGene:Csrnp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Csrnp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C334.60
Mouse Granule cells, donor2.CNhs12357.11731-123E338.62
Mouse Granule cells, donor3.CNhs12108.11636-122C727.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D241.52
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F231.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D331.93
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.35
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.25
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D442.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F444.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D855.22
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I637.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D637.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F645.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.72
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C54.51
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.50
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B219.62
cerebellum, neonate N30.CNhs11135.1395-42I215.71
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A462.01
corpus striatum, adult.CNhs10487.19-21D859.02
corpus striatum, neonate N00.CNhs11226.630-43F176.27
cortex, adult.CNhs10473.12-14D558.06
cortex, neonate N30.CNhs11107.1392-42F257.54
diencephalon, adult.CNhs10482.20-12F248.62
diencephalon, neonate N30.CNhs11201.1388-42B256.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.23
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C611.06
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C99.72
eyeball, embryo E17.CNhs11023.1261-18D412.36
eyeball, neonate N00.CNhs11207.633-15C619.05
eyeball, neonate N01.CNhs11140.1532-43E720.37
eyeball, neonate N02.CNhs11205.1551-44G819.68
eyeball, neonate N16.CNhs11188.777-19A219.14
forelimb, embryo E11.CNhs10596.335-25E211.64
forelimb, embryo E12.CNhs10600.359-14H225.15
forelimb, embryo E13.CNhs10589.384-1E217.07
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B58.23
gonad, embryo E13.CNhs11044.1564-45I69.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E858.25
hippocampus, neonate N00.CNhs11228.627-43G163.90
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I59.81
intestine, embryo E13.CNhs11010.381-16D510.45
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G72.95
kidney, neonate N10.CNhs11206.758-6D52.91
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C232.11
medulla oblongata, neonate N30.CNhs11200.1396-42A336.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.97
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I982.90
ovary, adult.CNhs10507.91-2I77.81
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G826.55
pituitary gland, embryo E12.CNhs11018.346-16E67.92
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F56.42
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C930.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E37.28
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E515.02
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A180.76
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A253.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A360.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D749.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A460.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A551.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A660.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A762.59
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A865.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A954.88
whole body, embryo E11.CNhs11014.324-5I86.85
whole body, embryo E12.CNhs10587.857-27C915.56
whole body, embryo E13.CNhs10512.372-23H218.27
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B110.48
whole body, embryo E16.CNhs10514.453-14F211.03
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.08
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.62
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.59
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.13
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.79
whole body, embryo E17.5.CNhs10513.490-9F911.38
whole body, embryo E17.CNhs10517.475-3I525.23
whole body, embryo E18.CNhs10516.493-3B313.33
whole body, neonate N00.CNhs10525.657-19C212.46
whole body, neonate N01.CNhs10576.659-23C69.76
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.89e-1423
neuroblast (sensu Vertebrata)4.89e-1423
neuron7.11e-1333
neuronal stem cell7.11e-1333
neuroblast7.11e-1333
electrically signaling cell7.11e-1333
electrically responsive cell8.00e-0939
electrically active cell8.00e-0939
neural cell7.00e-0743
ectodermal cell8.25e-0744
neurectodermal cell8.25e-0744

Uber anatomy
Ontology termp-valuen
neurectoderm2.97e-2664
neural plate2.97e-2664
presumptive neural plate2.97e-2664
regional part of nervous system1.17e-2354
central nervous system1.35e-2373
neural tube2.26e-2252
neural rod2.26e-2252
future spinal cord2.26e-2252
neural keel2.26e-2252
nervous system3.71e-2275
ecto-epithelium5.49e-2273
pre-chordal neural plate1.65e-2149
ectoderm-derived structure1.66e-2095
ectoderm1.66e-2095
presumptive ectoderm1.66e-2095
gray matter1.33e-1934
brain1.68e-1947
future brain1.68e-1947
regional part of brain1.08e-1846
anterior neural tube2.72e-1840
regional part of forebrain1.61e-1739
forebrain1.61e-1739
future forebrain1.61e-1739
brain grey matter1.29e-1629
regional part of telencephalon1.29e-1629
telencephalon1.29e-1629
structure with developmental contribution from neural crest7.32e-1692
cerebral cortex2.73e-1121
cerebral hemisphere2.73e-1121
pallium2.73e-1121
regional part of cerebral cortex1.57e-0917
occipital lobe9.40e-0910
visual cortex9.40e-0910
neocortex9.40e-0910
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