FFCP PHASE1:Mm9::chr15:59480249..59480260,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:59480249..59480260,+
|short_description=p3@Trib1
|description=CAGE_peak_3_at_Trib1_5end
|association_with_transcript=40bp_to_NM_144549,uc007vxw.1,uc007vxx...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=211770 | |EntrezGene=211770 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2144 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K4K4 | |UniProt=Q8K4K4 | ||
|association_with_transcript=40bp_to_NM_144549,uc007vxw.1,uc007vxx.1_5end | |||
|cluster_id=chr15:59480249..59480260,+ | |||
|description=CAGE_peak_3_at_Trib1_5end | |||
|id=chr15:59480249..59480260,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.28e-14,25;CL:0000223,6.38e-13,20;CL:0002563,4.51e-11,9;CL:0002251,4.51e-11,9;CL:0000182,1.83e-08,5;CL:0000239,2.11e-08,6;CL:0000677,2.11e-08,6;CL:0000584,2.11e-08,6;CL:0002076,4.41e-07,15;CL:0000075,4.62e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.64e-07!15;UBERON:0001242!4.21e-07!13;UBERON:0000060!4.21e-07!13;UBERON:0001262!4.21e-07!13;UBERON:0004786!4.21e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.51e-11,9;UBERON:0004808,4.51e-11,9;UBERON:0001277,4.51e-11,9;UBERON:0001242,1.04e-10,13;UBERON:0001262,1.04e-10,13;UBERON:0004786,1.04e-10,13;UBERON:0000344,6.30e-09,15;UBERON:0000485,1.07e-08,11;UBERON:0000160,1.27e-08,31;UBERON:0000490,5.64e-08,66;UBERON:0003929,5.32e-07,55 | |||
|phase1_expression=0.320297694209588,3.83872948403297,4.09499315450582,3.32710632437513,2.00358291978539,2.35030980676646,2.56973904655078,0.516493293766305,11.1223090499817,16.6185813688615,0.68487187290202,0.159544317990673,0.171200729931206,0,0,0,0,0.473193248037357,0,0,0.17008658030214,0,0,0.639969691173627,0.68822784320151,2.8711598205751,3.4460959692726,3.878482188346,0.950117097281869,0.504060259519861,1.77384408524244,0,0.61506478758457,0,1.44425809875637,1.16364251750945,2.45003227514843,9.20769587621197,4.6880120671428,3.66466620781659,20.5881020810855,15.7100461540443,6.79714494243615,1.00717454380462,0.912392380975631,0.367093504323363,0.782391344348039,0.218025156380447,0.439372365468944,2.13872888981712,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0,1.79760066311043,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95332153999418,3.6274348851257,6.08715426273523,13.7667820317022,46.238050692127,5.93673510801599,8.4470934268197,2.68816132258401,0.702222100658759,0,0.259786004602869,0,0.563373679106722,0,0,0,0.216491041011214,1.01343946190039,0,5.25245846707676,0.776813650941515,0.148442139064825,0,0.913396434936424,0.691846491768175,0,0.23517741427141,0.125666591329675,0.741584903203122,1.44599356919912,0,0.161766849947409,0.883366073841574,0,5.59175283654366,0.292780797011547,0,2.29911349687732,3.71426885968353,1.79970819298022,4.3203877204842,0,0,0,0,0,0,0.324482526135515,0.712875546952214,0.124406970610093,1.0108910337347,1.26265113531884,0.130120442962704,0,1.0803727788321,0.60281927134286,0.680364991513279,0.768682321709099,0.468508622798644,1.03481348295606,0,0.567318240503458,0.351902248327898,0,0.278047249225598,0.696504333044333,0.61734640922383,0,0,2.83082697826187,3.40996199274711,0,0.234526059981096,0,0,0.393528463494808,0,0,0,0.350296027101508,0,0.32833492815819,0.56748166682099,0,0.219550115291051,0.536825675041487,0.210289948564127,0.205809224758569,2.97376904685418,1.85115396664481,0.213288250535234,0,0.515469845288373,0,0,0,1.42358718463353,0.494096864172033,0.502670417600539,0.994782360205754,0.38992817423824,0.898819408654221,2.37751854862164,2.19055400579804,0.569003702859245,0.571242563048644,1.1270773567308,0,0.387904974335251,0.350679099451593,0.0632365371242573,0,0.156998727841375,0.370191491765402,1.48226313543574,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0.287696137450811,1.13494658742525,0.549122826376163,0,0.372140947668503,1.5601883655728,0.757736633841335,0.717589654087649,1.92977408545347,0.739012760666419,0.568474235311454,0.162964976442026,0.509235257325564,0.704070744865506,0.335012514883631,0.238043640886014,0.780534591431195,0.157635144106191,0.664394068946325,0.159454768657487,1.14704320301017,0.172684981865896,0.289298117163023,0,0.54390568381871,1.96705709207614,0.551873492609465,0,0,0.819674726883377,0.252470927204373,0.315508219416257,0.780877488593277,0.430846795465598,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0.35613120733451,0,0.824850614862677,0,0.242780636154981,0.604647113929502,0.943025398779491,0,0.614870295887855,0,0.363533729477506,0.712994756769443,0.316036757935816,0,2.06271086496374,0,0,0,0.214337035031592,0.177340233642274,0,0.658196082408484,0.304464949114599,0.938686832254841,0.63549621259146,1.10264199027481,0.98931751764888,0.807322133479528,0.422190474497091,0.358117032009409,1.31312719796049,0.582961673259701,0,0.341741761595705,0.206386867963223,0.370389054739423,0,0,0,5.09935289981566,6.15786390224095,5.11339903076368,0,0.316335993581135,0.406638934253697,0.216010681643603,0.418176592028937,0.87345025498471,0.404593039154462,0.495920734352016,0.523511883968059,2.20345454596048,0.621339313086926,0,0,0.165458490457098,0,0,0,0.234714477291508,0,0,0,0,0.316011120628178,0,0.205421914329655,0.25984164595559,0,0.596044064343795,0.120195449519969,0,0,0.15241361331,0.100826185136841,0.194915761479505,0.288635524920988,0.350630706544707,0.906921534460845,0.665957860122194,0.0897138566094757,0,0,0.375364950902364,0.549454872801795,1.71494703263253,0.501572104035363,0,0,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0.906284817968409,0,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0,0,0.320919209591815,0.758091635291392,0,0,0.187283014939765,0.256100609619477,0.229741875822453,0.952587382566147,0,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0,0.271608227691724,0.561142271657738,0,0,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,1.53030665655075,0.441182838239031,0.463735671240843 | |phase1_expression=0.320297694209588,3.83872948403297,4.09499315450582,3.32710632437513,2.00358291978539,2.35030980676646,2.56973904655078,0.516493293766305,11.1223090499817,16.6185813688615,0.68487187290202,0.159544317990673,0.171200729931206,0,0,0,0,0.473193248037357,0,0,0.17008658030214,0,0,0.639969691173627,0.68822784320151,2.8711598205751,3.4460959692726,3.878482188346,0.950117097281869,0.504060259519861,1.77384408524244,0,0.61506478758457,0,1.44425809875637,1.16364251750945,2.45003227514843,9.20769587621197,4.6880120671428,3.66466620781659,20.5881020810855,15.7100461540443,6.79714494243615,1.00717454380462,0.912392380975631,0.367093504323363,0.782391344348039,0.218025156380447,0.439372365468944,2.13872888981712,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0,1.79760066311043,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95332153999418,3.6274348851257,6.08715426273523,13.7667820317022,46.238050692127,5.93673510801599,8.4470934268197,2.68816132258401,0.702222100658759,0,0.259786004602869,0,0.563373679106722,0,0,0,0.216491041011214,1.01343946190039,0,5.25245846707676,0.776813650941515,0.148442139064825,0,0.913396434936424,0.691846491768175,0,0.23517741427141,0.125666591329675,0.741584903203122,1.44599356919912,0,0.161766849947409,0.883366073841574,0,5.59175283654366,0.292780797011547,0,2.29911349687732,3.71426885968353,1.79970819298022,4.3203877204842,0,0,0,0,0,0,0.324482526135515,0.712875546952214,0.124406970610093,1.0108910337347,1.26265113531884,0.130120442962704,0,1.0803727788321,0.60281927134286,0.680364991513279,0.768682321709099,0.468508622798644,1.03481348295606,0,0.567318240503458,0.351902248327898,0,0.278047249225598,0.696504333044333,0.61734640922383,0,0,2.83082697826187,3.40996199274711,0,0.234526059981096,0,0,0.393528463494808,0,0,0,0.350296027101508,0,0.32833492815819,0.56748166682099,0,0.219550115291051,0.536825675041487,0.210289948564127,0.205809224758569,2.97376904685418,1.85115396664481,0.213288250535234,0,0.515469845288373,0,0,0,1.42358718463353,0.494096864172033,0.502670417600539,0.994782360205754,0.38992817423824,0.898819408654221,2.37751854862164,2.19055400579804,0.569003702859245,0.571242563048644,1.1270773567308,0,0.387904974335251,0.350679099451593,0.0632365371242573,0,0.156998727841375,0.370191491765402,1.48226313543574,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0.287696137450811,1.13494658742525,0.549122826376163,0,0.372140947668503,1.5601883655728,0.757736633841335,0.717589654087649,1.92977408545347,0.739012760666419,0.568474235311454,0.162964976442026,0.509235257325564,0.704070744865506,0.335012514883631,0.238043640886014,0.780534591431195,0.157635144106191,0.664394068946325,0.159454768657487,1.14704320301017,0.172684981865896,0.289298117163023,0,0.54390568381871,1.96705709207614,0.551873492609465,0,0,0.819674726883377,0.252470927204373,0.315508219416257,0.780877488593277,0.430846795465598,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0.35613120733451,0,0.824850614862677,0,0.242780636154981,0.604647113929502,0.943025398779491,0,0.614870295887855,0,0.363533729477506,0.712994756769443,0.316036757935816,0,2.06271086496374,0,0,0,0.214337035031592,0.177340233642274,0,0.658196082408484,0.304464949114599,0.938686832254841,0.63549621259146,1.10264199027481,0.98931751764888,0.807322133479528,0.422190474497091,0.358117032009409,1.31312719796049,0.582961673259701,0,0.341741761595705,0.206386867963223,0.370389054739423,0,0,0,5.09935289981566,6.15786390224095,5.11339903076368,0,0.316335993581135,0.406638934253697,0.216010681643603,0.418176592028937,0.87345025498471,0.404593039154462,0.495920734352016,0.523511883968059,2.20345454596048,0.621339313086926,0,0,0.165458490457098,0,0,0,0.234714477291508,0,0,0,0,0.316011120628178,0,0.205421914329655,0.25984164595559,0,0.596044064343795,0.120195449519969,0,0,0.15241361331,0.100826185136841,0.194915761479505,0.288635524920988,0.350630706544707,0.906921534460845,0.665957860122194,0.0897138566094757,0,0,0.375364950902364,0.549454872801795,1.71494703263253,0.501572104035363,0,0,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0.900642406448441,0.906284817968409,0,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0,0,0.320919209591815,0.758091635291392,0,0,0.187283014939765,0.256100609619477,0.229741875822453,0.952587382566147,0,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0,0.271608227691724,0.561142271657738,0,0,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,1.53030665655075,0.441182838239031,0.463735671240843 | ||
|short_description=p3@Trib1 | |||
}} | }} |
Latest revision as of 20:56, 26 September 2015
Short description: | p3@Trib1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Trib1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2144 |
Association with transcript: | 40bp_to_NM_144549, uc007vxw.1, uc007vxx.1_5end |
EntrezGene: | Trib1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.28e-14 | 25 |
endodermal cell | 6.38e-13 | 20 |
intestinal epithelial cell | 4.51e-11 | 9 |
epithelial cell of alimentary canal | 4.51e-11 | 9 |
hepatocyte | 1.83e-08 | 5 |
brush border epithelial cell | 2.11e-08 | 6 |
gut absorptive cell | 2.11e-08 | 6 |
enterocyte | 2.11e-08 | 6 |
endo-epithelial cell | 4.41e-07 | 15 |
columnar/cuboidal epithelial cell | 4.62e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.51e-11 | 9 |
gastrointestinal system epithelium | 4.51e-11 | 9 |
intestinal epithelium | 4.51e-11 | 9 |
intestinal mucosa | 1.04e-10 | 13 |
wall of intestine | 1.04e-10 | 13 |
gastrointestinal system mucosa | 1.04e-10 | 13 |
mucosa | 6.30e-09 | 15 |
simple columnar epithelium | 1.07e-08 | 11 |
intestine | 1.27e-08 | 31 |
unilaminar epithelium | 5.64e-08 | 66 |
gut epithelium | 5.32e-07 | 55 |