FFCP PHASE1:Mm9::chr1:176431981..176432018,+: Difference between revisions
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{{FFCP|EntrezGene=54418|HGNC=|MCL_coexpression_id=1|UniProt=D3YYP2|association_with_transcript=4bp_to_ENSMUST00000085858_5end|description=CAGE_peak_2_at_Fmn2_5end|id=chr1:176431981..176432018,+|ontology_enrichment_celltype=CL:0000221!9.81e-19!44;CL:0000133!9.81e-19!44;CL:0002319!2.36e-18!43;CL:0000540!1.57e-15!33;CL:0000047!1.57e-15!33;CL:0000031!1.57e-15!33;CL:0000404!1.57e-15!33;CL:0000055!2.88e-12!50;CL:0000117!7.51e-12!23;CL:0000337!7.51e-12!23;CL:0000393!4.07e-10!39;CL:0000211!4.07e-10!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.56e-22,44;CL:0000133,1.56e-22,44;CL:0002319,4.95e-22,43;CL:0000540,5.96e-20,33;CL:0000047,5.96e-20,33;CL:0000031,5.96e-20,33;CL:0000404,5.96e-20,33;CL:0000117,4.19e-15,23;CL:0000337,4.19e-15,23;CL:0000393,7.09e-15,39;CL:0000211,7.09e-15,39;CL:0002321,1.37e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.55e-39!75;UBERON:0001016!7.55e-39!75;UBERON:0001017!1.28e-38!73;UBERON:0005743!1.28e-38!73;UBERON:0004121!2.66e-36!102;UBERON:0000924!2.66e-36!102;UBERON:0006601!2.66e-36!102;UBERON:0002346!4.67e-32!71;UBERON:0003075!4.67e-32!71;UBERON:0007284!4.67e-32!71;UBERON:0000033!1.00e-29!63;UBERON:0001049!2.70e-27!52;UBERON:0005068!2.70e-27!52;UBERON:0006241!2.70e-27!52;UBERON:0007135!2.70e-27!52;UBERON:0000955!9.78e-27!50;UBERON:0006238!9.78e-27!50;UBERON:0002616!6.16e-26!49;UBERON:0003056!3.48e-25!49;UBERON:0003080!6.76e-21!40;UBERON:0002780!2.97e-20!39;UBERON:0001890!2.97e-20!39;UBERON:0006240!2.97e-20!39;UBERON:0002020!5.52e-19!34;UBERON:0002791!2.16e-16!29;UBERON:0003528!2.16e-16!29;UBERON:0001893!2.16e-16!29;UBERON:0007811!8.10e-14!86;UBERON:0000153!2.37e-13!94;UBERON:0000956!3.57e-12!21;UBERON:0001869!3.57e-12!21;UBERON:0000203!3.57e-12!21;UBERON:0002619!6.91e-11!17;UBERON:0002021!2.06e-08!10;UBERON:0000411!2.06e-08!10;UBERON:0001950!2.06e-08!10;UBERON:0003076!6.85e-07!12;UBERON:0003057!6.85e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.85e-49,73;UBERON:0001016,9.00e-49,75;UBERON:0004121,6.23e-47,95;UBERON:0000924,6.23e-47,95;UBERON:0006601,6.23e-47,95;UBERON:0002346,1.70e-42,64;UBERON:0003075,1.70e-42,64;UBERON:0007284,1.70e-42,64;UBERON:0010371,8.76e-37,73;UBERON:0000073,1.53e-36,54;UBERON:0001049,1.51e-34,52;UBERON:0005068,1.51e-34,52;UBERON:0006241,1.51e-34,52;UBERON:0007135,1.51e-34,52;UBERON:0003056,1.08e-32,49;UBERON:0000955,5.29e-31,47;UBERON:0006238,5.29e-31,47;UBERON:0002616,5.64e-30,46;UBERON:0003080,4.97e-27,40;UBERON:0002780,3.50e-26,39;UBERON:0001890,3.50e-26,39;UBERON:0006240,3.50e-26,39;UBERON:0010314,1.60e-24,92;UBERON:0002020,1.66e-24,34;UBERON:0003528,4.34e-21,29;UBERON:0002791,4.34e-21,29;UBERON:0001893,4.34e-21,29;UBERON:0000956,1.57e-15,21;UBERON:0001869,1.57e-15,21;UBERON:0000203,1.57e-15,21;UBERON:0002619,7.78e-14,17;UBERON:0002021,1.40e-10,10;UBERON:0000411,1.40e-10,10;UBERON:0001950,1.40e-10,10;UBERON:0003076,9.19e-08,12;UBERON:0003057,9.19e-08,12|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,3.23164502574065,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,1.97717564461025,4.27745777963423,1.39986421625363,5.75010257459886,0.503347818173209,0,0,0,0,0,3.43937983461316,6.34789175126439,7.60597684207415,0.338844532069132,0,0,0,0,3.29560121570245,4.99483796918021,2.69592992002042,2.70011876663381,1.47227472945967,4.57041575046086,4.8591079009355,3.1847607795888,3.83381884072945,2.75765635983006,9.91042928994498,11.3641730895817,14.1318010595744,5.27545150920775,4.7573574673253,4.16730696445408,10.0505879640497,11.2552522006336,10.8486755921535,8.2496003932627,7.97281412474976,5.40558392893372,0.908714319998209,1.73814588245607,0,0,0,0,0,0,0.702222100658759,0,0,0,3.09855523508697,0,0,0,0,0.253359865475099,0,0.11418387971906,0,1.1875371125186,0.867426633830679,0.304465478312141,0.461230994512117,0.301445281105245,0.940709657085638,0.502666365318702,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0,0,8.78342391034641,8.58731497935166,0,0.11981512450592,0,0,10.3355541189328,10.5225138648284,3.26701315493447,13.5582969749976,10.9957646652042,12.4672826735736,10.8701646255398,0.509196819251581,0.248813941220186,0,2.73574412652416,3.12289063110489,1.83921683546778,4.86167750474443,4.06903008156431,8.77670839052129,7.43059577652129,7.02762934197966,5.43277078551933,1.72454394346274,1.32374256117473,0.703804496655795,0.43839146485515,1.11218899690239,0,0.61734640922383,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.900310307305074,0.946978942340841,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0,10.7247873767705,4.32199371992995,0,0,1.70630600428187,2.09013004674395,1.54640953586512,0.201683524623343,0.444756087689741,0.570676878337677,0,0.494096864172033,1.00534083520108,0.397912944082302,0.58489226135736,0,0.216138049874694,0.398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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54418 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=D3YYP2 | |||
|association_with_transcript=4bp_to_ENSMUST00000085858_5end | |||
|cluster_id=chr1:176431981..176432018,+ | |||
|description=CAGE_peak_2_at_Fmn2_5end | |||
|id=chr1:176431981..176432018,+ | |||
|ontology_enrichment_celltype=CL:0000221!9.81e-19!44;CL:0000133!9.81e-19!44;CL:0002319!2.36e-18!43;CL:0000540!1.57e-15!33;CL:0000047!1.57e-15!33;CL:0000031!1.57e-15!33;CL:0000404!1.57e-15!33;CL:0000055!2.88e-12!50;CL:0000117!7.51e-12!23;CL:0000337!7.51e-12!23;CL:0000393!4.07e-10!39;CL:0000211!4.07e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.56e-22,44;CL:0000133,1.56e-22,44;CL:0002319,4.95e-22,43;CL:0000540,5.96e-20,33;CL:0000047,5.96e-20,33;CL:0000031,5.96e-20,33;CL:0000404,5.96e-20,33;CL:0000117,4.19e-15,23;CL:0000337,4.19e-15,23;CL:0000393,7.09e-15,39;CL:0000211,7.09e-15,39;CL:0002321,1.37e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.55e-39!75;UBERON:0001016!7.55e-39!75;UBERON:0001017!1.28e-38!73;UBERON:0005743!1.28e-38!73;UBERON:0004121!2.66e-36!102;UBERON:0000924!2.66e-36!102;UBERON:0006601!2.66e-36!102;UBERON:0002346!4.67e-32!71;UBERON:0003075!4.67e-32!71;UBERON:0007284!4.67e-32!71;UBERON:0000033!1.00e-29!63;UBERON:0001049!2.70e-27!52;UBERON:0005068!2.70e-27!52;UBERON:0006241!2.70e-27!52;UBERON:0007135!2.70e-27!52;UBERON:0000955!9.78e-27!50;UBERON:0006238!9.78e-27!50;UBERON:0002616!6.16e-26!49;UBERON:0003056!3.48e-25!49;UBERON:0003080!6.76e-21!40;UBERON:0002780!2.97e-20!39;UBERON:0001890!2.97e-20!39;UBERON:0006240!2.97e-20!39;UBERON:0002020!5.52e-19!34;UBERON:0002791!2.16e-16!29;UBERON:0003528!2.16e-16!29;UBERON:0001893!2.16e-16!29;UBERON:0007811!8.10e-14!86;UBERON:0000153!2.37e-13!94;UBERON:0000956!3.57e-12!21;UBERON:0001869!3.57e-12!21;UBERON:0000203!3.57e-12!21;UBERON:0002619!6.91e-11!17;UBERON:0002021!2.06e-08!10;UBERON:0000411!2.06e-08!10;UBERON:0001950!2.06e-08!10;UBERON:0003076!6.85e-07!12;UBERON:0003057!6.85e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.85e-49,73;UBERON:0001016,9.00e-49,75;UBERON:0004121,6.23e-47,95;UBERON:0000924,6.23e-47,95;UBERON:0006601,6.23e-47,95;UBERON:0002346,1.70e-42,64;UBERON:0003075,1.70e-42,64;UBERON:0007284,1.70e-42,64;UBERON:0010371,8.76e-37,73;UBERON:0000073,1.53e-36,54;UBERON:0001049,1.51e-34,52;UBERON:0005068,1.51e-34,52;UBERON:0006241,1.51e-34,52;UBERON:0007135,1.51e-34,52;UBERON:0003056,1.08e-32,49;UBERON:0000955,5.29e-31,47;UBERON:0006238,5.29e-31,47;UBERON:0002616,5.64e-30,46;UBERON:0003080,4.97e-27,40;UBERON:0002780,3.50e-26,39;UBERON:0001890,3.50e-26,39;UBERON:0006240,3.50e-26,39;UBERON:0010314,1.60e-24,92;UBERON:0002020,1.66e-24,34;UBERON:0003528,4.34e-21,29;UBERON:0002791,4.34e-21,29;UBERON:0001893,4.34e-21,29;UBERON:0000956,1.57e-15,21;UBERON:0001869,1.57e-15,21;UBERON:0000203,1.57e-15,21;UBERON:0002619,7.78e-14,17;UBERON:0002021,1.40e-10,10;UBERON:0000411,1.40e-10,10;UBERON:0001950,1.40e-10,10;UBERON:0003076,9.19e-08,12;UBERON:0003057,9.19e-08,12 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,3.23164502574065,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,1.97717564461025,4.27745777963423,1.39986421625363,5.75010257459886,0.503347818173209,0,0,0,0,0,3.43937983461316,6.34789175126439,7.60597684207415,0.338844532069132,0,0,0,0,3.29560121570245,4.99483796918021,2.69592992002042,2.70011876663381,1.47227472945967,4.57041575046086,4.8591079009355,3.1847607795888,3.83381884072945,2.75765635983006,9.91042928994498,11.3641730895817,14.1318010595744,5.27545150920775,4.7573574673253,4.16730696445408,10.0505879640497,11.2552522006336,10.8486755921535,8.2496003932627,7.97281412474976,5.40558392893372,0.908714319998209,1.73814588245607,0,0,0,0,0,0,0.702222100658759,0,0,0,3.09855523508697,0,0,0,0,0.253359865475099,0,0.11418387971906,0,1.1875371125186,0.867426633830679,0.304465478312141,0.461230994512117,0.301445281105245,0.940709657085638,0.502666365318702,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0,0,8.78342391034641,8.58731497935166,0,0.11981512450592,0,0,10.3355541189328,10.5225138648284,3.26701315493447,13.5582969749976,10.9957646652042,12.4672826735736,10.8701646255398,0.509196819251581,0.248813941220186,0,2.73574412652416,3.12289063110489,1.83921683546778,4.86167750474443,4.06903008156431,8.77670839052129,7.43059577652129,7.02762934197966,5.43277078551933,1.72454394346274,1.32374256117473,0.703804496655795,0.43839146485515,1.11218899690239,0,0.61734640922383,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.900310307305074,0.946978942340841,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0,10.7247873767705,4.32199371992995,0,0,1.70630600428187,2.09013004674395,1.54640953586512,0.201683524623343,0.444756087689741,0.570676878337677,0,0.494096864172033,1.00534083520108,0.397912944082302,0.58489226135736,0,0.216138049874694,0.398282546508734,0.189667900953082,0.913988100877831,1.1270773567308,0.407302655690628,0.775809948670503,0.420814919341911,0.252946148497029,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0.848725428875941,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,10.5963389391943,9.72856998715286,0,0,3.47059041357882,2.34263246577983,4.95473814785438,3.58453196928828,4.90157082981267,3.67999490025482,2.83367491172426,2.92255857911312,2.37172666767914,18.9579576688866,0.141940085208269,0.712262414669021,0.162886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0.906970670894253,0.943025398779491,0.590603785761546,1.53717573971964,2.06742634534577,2.18120237686503,1.06949213515416,0.948110273807448,0,1.03135543248187,7.14923172082955,3.6012218806262,1.68166288917581,2.35770738534752,2.6601035046341,1.60531935841864,1.97458824722545,3.65357938937519,0.938686832254841,0.21183207086382,0,0,0.645857706783622,0.301564624640779,0.358117032009409,0.164140899745061,0.582961673259701,8.90041449650446,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0,0.474503990371703,1.21991680276109,0.648032044930808,0,0.655087691238533,0.404593039154462,0.578574190077352,0,0.388844919875379,0,0,0.299033092087958,0.496375471371293,1.16670713006429,0.258319646955462,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0.167884616364078,0,0.187682475451182,1.09890974560359,0,0,18.0720589637461,18.8733346967943,21.1971339972577,13.2326950404639,15.7568979547248,20.3956352295219,21.6007200074178,15.7612421128477,17.672553950384,15.5328093525546,1.86817225651518,4.78829848081237,3.07320490357441,1.21553358534147,0.628839487883947,1.2869045591501,1.33348036680969,1.85431551515005,1.92551525755089,1.01078884705519,1.01391719956096,0.943131706930381,1.21733959710847,1.15245274328765,1.20614484806788,0,1.27472758539341,1.35036454324594,2.06042950401653,1.61918812147837,1.37147700954166,1.24233064311536,1.1921809497366,1.88950341622027,1.12931256498397,1.26921911837515,1.28049581010941,1.57841826862706,1.35804113845862,1.68342681497322,0.711810108745045,1.57607171800902,1.63692417267876,2.16911577660352,2.3148793317737,2.24829520144151,0.935726433781634,1.07435527024149,0.956441660344217,0.661774257358546,0.695603506861264 | |||
|short_description=p2@Fmn2 | |||
}} |
Latest revision as of 21:01, 26 September 2015
Short description: | p2@Fmn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fmn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 4bp_to_ENSMUST00000085858_5end |
EntrezGene: | Fmn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.56e-22 | 44 |
neurectodermal cell | 1.56e-22 | 44 |
neural cell | 4.95e-22 | 43 |
neuron | 5.96e-20 | 33 |
neuronal stem cell | 5.96e-20 | 33 |
neuroblast | 5.96e-20 | 33 |
electrically signaling cell | 5.96e-20 | 33 |
CNS neuron (sensu Vertebrata) | 4.19e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.19e-15 | 23 |
electrically responsive cell | 7.09e-15 | 39 |
electrically active cell | 7.09e-15 | 39 |
embryonic cell | 1.37e-08 | 70 |