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FFCP PHASE1:Mm9::chr1:176431981..176432018,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:176431981..176432018,+
|DHSsupport=NA
|short_description=p2@Fmn2
|DPIdataset=NA
|description=CAGE_peak_2_at_Fmn2_5end
|association_with_transcript=4bp_to_ENSMUST00000085858_5end
|EntrezGene=54418
|EntrezGene=54418
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D3YYP2
|UniProt=D3YYP2
|association_with_transcript=4bp_to_ENSMUST00000085858_5end
|cluster_id=chr1:176431981..176432018,+
|description=CAGE_peak_2_at_Fmn2_5end
|id=chr1:176431981..176432018,+
|ontology_enrichment_celltype=CL:0000221!9.81e-19!44;CL:0000133!9.81e-19!44;CL:0002319!2.36e-18!43;CL:0000540!1.57e-15!33;CL:0000047!1.57e-15!33;CL:0000031!1.57e-15!33;CL:0000404!1.57e-15!33;CL:0000055!2.88e-12!50;CL:0000117!7.51e-12!23;CL:0000337!7.51e-12!23;CL:0000393!4.07e-10!39;CL:0000211!4.07e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.56e-22,44;CL:0000133,1.56e-22,44;CL:0002319,4.95e-22,43;CL:0000540,5.96e-20,33;CL:0000047,5.96e-20,33;CL:0000031,5.96e-20,33;CL:0000404,5.96e-20,33;CL:0000117,4.19e-15,23;CL:0000337,4.19e-15,23;CL:0000393,7.09e-15,39;CL:0000211,7.09e-15,39;CL:0002321,1.37e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.55e-39!75;UBERON:0001016!7.55e-39!75;UBERON:0001017!1.28e-38!73;UBERON:0005743!1.28e-38!73;UBERON:0004121!2.66e-36!102;UBERON:0000924!2.66e-36!102;UBERON:0006601!2.66e-36!102;UBERON:0002346!4.67e-32!71;UBERON:0003075!4.67e-32!71;UBERON:0007284!4.67e-32!71;UBERON:0000033!1.00e-29!63;UBERON:0001049!2.70e-27!52;UBERON:0005068!2.70e-27!52;UBERON:0006241!2.70e-27!52;UBERON:0007135!2.70e-27!52;UBERON:0000955!9.78e-27!50;UBERON:0006238!9.78e-27!50;UBERON:0002616!6.16e-26!49;UBERON:0003056!3.48e-25!49;UBERON:0003080!6.76e-21!40;UBERON:0002780!2.97e-20!39;UBERON:0001890!2.97e-20!39;UBERON:0006240!2.97e-20!39;UBERON:0002020!5.52e-19!34;UBERON:0002791!2.16e-16!29;UBERON:0003528!2.16e-16!29;UBERON:0001893!2.16e-16!29;UBERON:0007811!8.10e-14!86;UBERON:0000153!2.37e-13!94;UBERON:0000956!3.57e-12!21;UBERON:0001869!3.57e-12!21;UBERON:0000203!3.57e-12!21;UBERON:0002619!6.91e-11!17;UBERON:0002021!2.06e-08!10;UBERON:0000411!2.06e-08!10;UBERON:0001950!2.06e-08!10;UBERON:0003076!6.85e-07!12;UBERON:0003057!6.85e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.85e-49,73;UBERON:0001016,9.00e-49,75;UBERON:0004121,6.23e-47,95;UBERON:0000924,6.23e-47,95;UBERON:0006601,6.23e-47,95;UBERON:0002346,1.70e-42,64;UBERON:0003075,1.70e-42,64;UBERON:0007284,1.70e-42,64;UBERON:0010371,8.76e-37,73;UBERON:0000073,1.53e-36,54;UBERON:0001049,1.51e-34,52;UBERON:0005068,1.51e-34,52;UBERON:0006241,1.51e-34,52;UBERON:0007135,1.51e-34,52;UBERON:0003056,1.08e-32,49;UBERON:0000955,5.29e-31,47;UBERON:0006238,5.29e-31,47;UBERON:0002616,5.64e-30,46;UBERON:0003080,4.97e-27,40;UBERON:0002780,3.50e-26,39;UBERON:0001890,3.50e-26,39;UBERON:0006240,3.50e-26,39;UBERON:0010314,1.60e-24,92;UBERON:0002020,1.66e-24,34;UBERON:0003528,4.34e-21,29;UBERON:0002791,4.34e-21,29;UBERON:0001893,4.34e-21,29;UBERON:0000956,1.57e-15,21;UBERON:0001869,1.57e-15,21;UBERON:0000203,1.57e-15,21;UBERON:0002619,7.78e-14,17;UBERON:0002021,1.40e-10,10;UBERON:0000411,1.40e-10,10;UBERON:0001950,1.40e-10,10;UBERON:0003076,9.19e-08,12;UBERON:0003057,9.19e-08,12
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,3.23164502574065,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,1.97717564461025,4.27745777963423,1.39986421625363,5.75010257459886,0.503347818173209,0,0,0,0,0,3.43937983461316,6.34789175126439,7.60597684207415,0.338844532069132,0,0,0,0,3.29560121570245,4.99483796918021,2.69592992002042,2.70011876663381,1.47227472945967,4.57041575046086,4.8591079009355,3.1847607795888,3.83381884072945,2.75765635983006,9.91042928994498,11.3641730895817,14.1318010595744,5.27545150920775,4.7573574673253,4.16730696445408,10.0505879640497,11.2552522006336,10.8486755921535,8.2496003932627,7.97281412474976,5.40558392893372,0.908714319998209,1.73814588245607,0,0,0,0,0,0,0.702222100658759,0,0,0,3.09855523508697,0,0,0,0,0.253359865475099,0,0.11418387971906,0,1.1875371125186,0.867426633830679,0.304465478312141,0.461230994512117,0.301445281105245,0.940709657085638,0.502666365318702,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0,0,8.78342391034641,8.58731497935166,0,0.11981512450592,0,0,10.3355541189328,10.5225138648284,3.26701315493447,13.5582969749976,10.9957646652042,12.4672826735736,10.8701646255398,0.509196819251581,0.248813941220186,0,2.73574412652416,3.12289063110489,1.83921683546778,4.86167750474443,4.06903008156431,8.77670839052129,7.43059577652129,7.02762934197966,5.43277078551933,1.72454394346274,1.32374256117473,0.703804496655795,0.43839146485515,1.11218899690239,0,0.61734640922383,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.900310307305074,0.946978942340841,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0,10.7247873767705,4.32199371992995,0,0,1.70630600428187,2.09013004674395,1.54640953586512,0.201683524623343,0.444756087689741,0.570676878337677,0,0.494096864172033,1.00534083520108,0.397912944082302,0.58489226135736,0,0.216138049874694,0.398282546508734,0.189667900953082,0.913988100877831,1.1270773567308,0.407302655690628,0.775809948670503,0.420814919341911,0.252946148497029,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0.848725428875941,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,10.5963389391943,9.72856998715286,0,0,3.47059041357882,2.34263246577983,4.95473814785438,3.58453196928828,4.90157082981267,3.67999490025482,2.83367491172426,2.92255857911312,2.37172666767914,18.9579576688866,0.141940085208269,0.712262414669021,0.162886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0.906970670894253,0.943025398779491,0.590603785761546,1.53717573971964,2.06742634534577,2.18120237686503,1.06949213515416,0.948110273807448,0,1.03135543248187,7.14923172082955,3.6012218806262,1.68166288917581,2.35770738534752,2.6601035046341,1.60531935841864,1.97458824722545,3.65357938937519,0.938686832254841,0.21183207086382,0,0,0.645857706783622,0.301564624640779,0.358117032009409,0.164140899745061,0.582961673259701,8.90041449650446,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0,0.474503990371703,1.21991680276109,0.648032044930808,0,0.655087691238533,0.404593039154462,0.578574190077352,0,0.388844919875379,0,0,0.299033092087958,0.496375471371293,1.16670713006429,0.258319646955462,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0.167884616364078,0,0.187682475451182,1.09890974560359,0,0,18.0720589637461,18.8733346967943,21.1971339972577,13.2326950404639,15.7568979547248,20.3956352295219,21.6007200074178,15.7612421128477,17.672553950384,15.5328093525546,1.86817225651518,4.78829848081237,3.07320490357441,1.21553358534147,0.628839487883947,1.2869045591501,1.33348036680969,1.85431551515005,1.92551525755089,1.01078884705519,1.01391719956096,0.943131706930381,1.21733959710847,1.15245274328765,1.20614484806788,0,1.27472758539341,1.35036454324594,2.06042950401653,1.61918812147837,1.37147700954166,1.24233064311536,1.1921809497366,1.88950341622027,1.12931256498397,1.26921911837515,1.28049581010941,1.57841826862706,1.35804113845862,1.68342681497322,0.711810108745045,1.57607171800902,1.63692417267876,2.16911577660352,2.3148793317737,2.24829520144151,0.935726433781634,1.07435527024149,0.956441660344217,0.661774257358546,0.695603506861264
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,3.23164502574065,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,5.23260375313072,1.97717564461025,4.27745777963423,1.39986421625363,5.75010257459886,0.503347818173209,0,0,0,0,0,3.43937983461316,6.34789175126439,7.60597684207415,0.338844532069132,0,0,0,0,3.29560121570245,4.99483796918021,2.69592992002042,2.70011876663381,1.47227472945967,4.57041575046086,4.8591079009355,3.1847607795888,3.83381884072945,2.75765635983006,9.91042928994498,11.3641730895817,14.1318010595744,5.27545150920775,4.7573574673253,4.16730696445408,10.0505879640497,11.2552522006336,10.8486755921535,8.2496003932627,7.97281412474976,5.40558392893372,0.908714319998209,1.73814588245607,0,0,0,0,0,0,0.702222100658759,0,0,0,3.09855523508697,0,0,0,0,0.253359865475099,0,0.11418387971906,0,1.1875371125186,0.867426633830679,0.304465478312141,0.461230994512117,0.301445281105245,0.940709657085638,0.502666365318702,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0,0,8.78342391034641,8.58731497935166,0,0.11981512450592,0,0,10.3355541189328,10.5225138648284,3.26701315493447,13.5582969749976,10.9957646652042,12.4672826735736,10.8701646255398,0.509196819251581,0.248813941220186,0,2.73574412652416,3.12289063110489,1.83921683546778,4.86167750474443,4.06903008156431,8.77670839052129,7.43059577652129,7.02762934197966,5.43277078551933,1.72454394346274,1.32374256117473,0.703804496655795,0.43839146485515,1.11218899690239,0,0.61734640922383,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0.900310307305074,0.946978942340841,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0,10.7247873767705,4.32199371992995,0,0,1.70630600428187,2.09013004674395,1.54640953586512,0.201683524623343,0.444756087689741,0.570676878337677,0,0.494096864172033,1.00534083520108,0.397912944082302,0.58489226135736,0,0.216138049874694,0.398282546508734,0.189667900953082,0.913988100877831,1.1270773567308,0.407302655690628,0.775809948670503,0.420814919341911,0.252946148497029,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0.848725428875941,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,10.5963389391943,9.72856998715286,0,0,3.47059041357882,2.34263246577983,4.95473814785438,3.58453196928828,4.90157082981267,3.67999490025482,2.83367491172426,2.92255857911312,2.37172666767914,18.9579576688866,0.141940085208269,0.712262414669021,0.162886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0.906970670894253,0.943025398779491,0.590603785761546,1.53717573971964,2.06742634534577,2.18120237686503,1.06949213515416,0.948110273807448,0,1.03135543248187,7.14923172082955,3.6012218806262,1.68166288917581,2.35770738534752,2.6601035046341,1.60531935841864,1.97458824722545,3.65357938937519,0.938686832254841,0.21183207086382,0,0,0.645857706783622,0.301564624640779,0.358117032009409,0.164140899745061,0.582961673259701,8.90041449650446,0,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0,0.474503990371703,1.21991680276109,0.648032044930808,0,0.655087691238533,0.404593039154462,0.578574190077352,0,0.388844919875379,0,0,0.299033092087958,0.496375471371293,1.16670713006429,0.258319646955462,0.168956125490778,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0.167884616364078,0,0.187682475451182,1.09890974560359,0,0,18.0720589637461,18.8733346967943,21.1971339972577,13.2326950404639,15.7568979547248,20.3956352295219,21.6007200074178,15.7612421128477,17.672553950384,15.5328093525546,1.86817225651518,4.78829848081237,3.07320490357441,1.21553358534147,0.628839487883947,1.2869045591501,1.33348036680969,1.85431551515005,1.92551525755089,1.01078884705519,1.01391719956096,0.943131706930381,1.21733959710847,1.15245274328765,1.20614484806788,0,1.27472758539341,1.35036454324594,2.06042950401653,1.61918812147837,1.37147700954166,1.24233064311536,1.1921809497366,1.88950341622027,1.12931256498397,1.26921911837515,1.28049581010941,1.57841826862706,1.35804113845862,1.68342681497322,0.711810108745045,1.57607171800902,1.63692417267876,2.16911577660352,2.3148793317737,2.24829520144151,0.935726433781634,1.07435527024149,0.956441660344217,0.661774257358546,0.695603506861264
|short_description=p2@Fmn2
}}
}}

Latest revision as of 21:01, 26 September 2015

Short description:p2@Fmn2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Fmn2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 4bp_to_ENSMUST00000085858_5end
EntrezGene:Fmn2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Fmn2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.78
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F212.47
diencephalon, neonate N30.CNhs11201.1388-42B210.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C68.78
eyeball, neonate N01.CNhs11140.1532-43E77.43
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.72
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.60
medulla oblongata, neonate N30.CNhs11200.1396-42A39.73
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I918.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.56e-2244
neurectodermal cell1.56e-2244
neural cell4.95e-2243
neuron5.96e-2033
neuronal stem cell5.96e-2033
neuroblast5.96e-2033
electrically signaling cell5.96e-2033
CNS neuron (sensu Vertebrata)4.19e-1523
neuroblast (sensu Vertebrata)4.19e-1523
electrically responsive cell7.09e-1539
electrically active cell7.09e-1539
embryonic cell1.37e-0870

Uber anatomy
Ontology termp-valuen
central nervous system1.85e-4973
nervous system9.00e-4975
ectoderm-derived structure6.23e-4795
ectoderm6.23e-4795
presumptive ectoderm6.23e-4795
neurectoderm1.70e-4264
neural plate1.70e-4264
presumptive neural plate1.70e-4264
ecto-epithelium8.76e-3773
regional part of nervous system1.53e-3654
neural tube1.51e-3452
neural rod1.51e-3452
future spinal cord1.51e-3452
neural keel1.51e-3452
pre-chordal neural plate1.08e-3249
brain5.29e-3147
future brain5.29e-3147
regional part of brain5.64e-3046
anterior neural tube4.97e-2740
regional part of forebrain3.50e-2639
forebrain3.50e-2639
future forebrain3.50e-2639
structure with developmental contribution from neural crest1.60e-2492
gray matter1.66e-2434
brain grey matter4.34e-2129
regional part of telencephalon4.34e-2129
telencephalon4.34e-2129
cerebral cortex1.57e-1521
cerebral hemisphere1.57e-1521
pallium1.57e-1521
regional part of cerebral cortex7.78e-1417
occipital lobe1.40e-1010
visual cortex1.40e-1010
neocortex1.40e-1010
posterior neural tube9.19e-0812
chordal neural plate9.19e-0812
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