FFCP PHASE1:Mm9::chr7:52956350..52956386,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12348 | |EntrezGene=12348 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000137294_5end | |association_with_transcript=0bp_to_ENSMUST00000137294_5end | ||
|cluster_id=chr7:52956350..52956386,+ | |||
|description=CAGE_peak_1_at_Car11_5end | |description=CAGE_peak_1_at_Car11_5end | ||
|id=chr7:52956350..52956386,+ | |id=chr7:52956350..52956386,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.39e-16!44;CL:0000133!2.39e-16!44;CL:0002319!8.11e-16!43;CL:0000055!2.04e-15!50;CL:0000540!1.75e-14!33;CL:0000047!1.75e-14!33;CL:0000031!1.75e-14!33;CL:0000404!1.75e-14!33;CL:0000393!2.76e-14!39;CL:0000211!2.76e-14!39;CL:0000117!2.77e-10!23;CL:0000337!2.77e-10!23 | |ontology_enrichment_celltype=CL:0000221!2.39e-16!44;CL:0000133!2.39e-16!44;CL:0002319!8.11e-16!43;CL:0000055!2.04e-15!50;CL:0000540!1.75e-14!33;CL:0000047!1.75e-14!33;CL:0000031!1.75e-14!33;CL:0000404!1.75e-14!33;CL:0000393!2.76e-14!39;CL:0000211!2.76e-14!39;CL:0000117!2.77e-10!23;CL:0000337!2.77e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.19e-17,44;CL:0000133,3.19e-17,44;CL:0002319,1.18e-16,43;CL:0000540,2.23e-15,33;CL:0000047,2.23e-15,33;CL:0000031,2.23e-15,33;CL:0000404,2.23e-15,33;CL:0000393,4.77e-15,39;CL:0000211,4.77e-15,39;CL:0000117,6.90e-11,23;CL:0000337,6.90e-11,23;CL:0002321,8.67e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.59e-33!73;UBERON:0005743!2.59e-33!73;UBERON:0000073!3.60e-33!75;UBERON:0001016!3.60e-33!75;UBERON:0004121!6.07e-26!102;UBERON:0000924!6.07e-26!102;UBERON:0006601!6.07e-26!102;UBERON:0000955!2.28e-25!50;UBERON:0006238!2.28e-25!50;UBERON:0000033!5.65e-25!63;UBERON:0002616!1.31e-24!49;UBERON:0001049!2.40e-24!52;UBERON:0005068!2.40e-24!52;UBERON:0006241!2.40e-24!52;UBERON:0007135!2.40e-24!52;UBERON:0002346!5.92e-23!71;UBERON:0003075!5.92e-23!71;UBERON:0007284!5.92e-23!71;UBERON:0003080!4.01e-19!40;UBERON:0002780!1.75e-18!39;UBERON:0001890!1.75e-18!39;UBERON:0006240!1.75e-18!39;UBERON:0003056!2.99e-18!49;UBERON:0002020!1.01e-15!34;UBERON:0002791!7.37e-15!29;UBERON:0003528!7.37e-15!29;UBERON:0001893!7.37e-15!29;UBERON:0000956!1.50e-11!21;UBERON:0001869!1.50e-11!21;UBERON:0000203!1.50e-11!21;UBERON:0004111!1.52e-11!122;UBERON:0000025!6.23e-11!114;UBERON:0000153!1.82e-09!94;UBERON:0007811!4.75e-09!86;UBERON:0002619!5.94e-09!17 | |ontology_enrichment_uberon=UBERON:0001017!2.59e-33!73;UBERON:0005743!2.59e-33!73;UBERON:0000073!3.60e-33!75;UBERON:0001016!3.60e-33!75;UBERON:0004121!6.07e-26!102;UBERON:0000924!6.07e-26!102;UBERON:0006601!6.07e-26!102;UBERON:0000955!2.28e-25!50;UBERON:0006238!2.28e-25!50;UBERON:0000033!5.65e-25!63;UBERON:0002616!1.31e-24!49;UBERON:0001049!2.40e-24!52;UBERON:0005068!2.40e-24!52;UBERON:0006241!2.40e-24!52;UBERON:0007135!2.40e-24!52;UBERON:0002346!5.92e-23!71;UBERON:0003075!5.92e-23!71;UBERON:0007284!5.92e-23!71;UBERON:0003080!4.01e-19!40;UBERON:0002780!1.75e-18!39;UBERON:0001890!1.75e-18!39;UBERON:0006240!1.75e-18!39;UBERON:0003056!2.99e-18!49;UBERON:0002020!1.01e-15!34;UBERON:0002791!7.37e-15!29;UBERON:0003528!7.37e-15!29;UBERON:0001893!7.37e-15!29;UBERON:0000956!1.50e-11!21;UBERON:0001869!1.50e-11!21;UBERON:0000203!1.50e-11!21;UBERON:0004111!1.52e-11!122;UBERON:0000025!6.23e-11!114;UBERON:0000153!1.82e-09!94;UBERON:0007811!4.75e-09!86;UBERON:0002619!5.94e-09!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.20e-36,73;UBERON:0001016,3.41e-35,75;UBERON:0004121,9.55e-28,95;UBERON:0000924,9.55e-28,95;UBERON:0006601,9.55e-28,95;UBERON:0000073,2.46e-27,54;UBERON:0002346,3.88e-26,64;UBERON:0003075,3.88e-26,64;UBERON:0007284,3.88e-26,64;UBERON:0001049,6.28e-26,52;UBERON:0005068,6.28e-26,52;UBERON:0006241,6.28e-26,52;UBERON:0007135,6.28e-26,52;UBERON:0000955,5.56e-25,47;UBERON:0006238,5.56e-25,47;UBERON:0002616,3.50e-24,46;UBERON:0010371,6.02e-22,73;UBERON:0010314,1.73e-21,92;UBERON:0003080,2.43e-20,40;UBERON:0002780,1.18e-19,39;UBERON:0001890,1.18e-19,39;UBERON:0006240,1.18e-19,39;UBERON:0003056,9.07e-19,49;UBERON:0002020,1.06e-16,34;UBERON:0003528,8.85e-16,29;UBERON:0002791,8.85e-16,29;UBERON:0001893,8.85e-16,29;UBERON:0000956,3.05e-12,21;UBERON:0001869,3.05e-12,21;UBERON:0000203,3.05e-12,21;UBERON:0004111,1.49e-09,122;UBERON:0002619,1.82e-09,17;UBERON:0000025,3.50e-09,114 | |||
|phase1_expression=6.72625157840135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,1.90509202037889,1.23012957516914,0,0,0,0,0,0,0,0,0,0,6.04304726282771,5.77848507951233,2.38610777810186,7.82391344348039,3.48840250208714,3.95435128922049,2.3331587888914,1.67983705950435,0,0,0,0,0.257259436035947,1.71920063963254,1.03134418455488,3.03474691289397,3.1739458756322,2.53532561402472,1.35537812827653,0,0.449949858640699,1.97773272513395,0.7104801149461,8.08920298399693,19.2109152660777,10.5763404554647,10.5304631898719,8.62332341540666,5.71301968807607,1.76694832761291,4.5321595709533,4.02550978276593,6.43453150627015,6.60695285996332,7.91661496128164,6.75868746327471,4.2203612073662,3.11057988248193,4.16730696445408,9.77140496504833,5.6276261003168,6.87592114995646,2.94628585473668,2.98980529678116,2.05039390407831,0.757261933331841,4.00529268565963,1.15945795480671,0.860423876981386,0,1.07940638327563,0.649776417447669,0.896053774194671,1.54488862144927,2.55645483867087,3.89679006904303,1.7666978725517,6.05626705039726,0,0,0,0,0,0,1.48439043634778,0.517875767294343,0.593768556259299,2.08182392119363,2.13125834818499,0.922461989024234,1.05505848386836,1.76383060703557,0,0.247194967734374,3.18118585223806,0,0.485300549842228,0.441683036920787,0.484875253135222,0,7.61230072230023,9.00620839297857,0.255457055208591,0.11981512450592,0,0,7.78911324905078,5.94750783664214,2.38743269014442,7.82209440865244,9.2057564638919,8.72709787150152,8.92326946872667,4.9901288286655,0.497627882440372,0.758168275301024,1.89397670297827,2.34216797332867,1.37941262660084,2.70093194708024,1.9591626318643,1.90502197623718,0.640568601424249,0.749613796477831,3.88055056108524,1.5089759505299,2.64748512234947,1.93546236580344,2.6303487891309,2.22437799380478,1.0447564995665,1.85203922767149,4.57778813682534,0,0,0,1.65700618028402,3.75241695969754,1.98068267607116,1.89395788468168,2.75469924446365,2.1597395804233,2.79040733700489,1.60964040839772,1.05088808130453,0.658239399653922,0.656669856316381,1.4592385718254,1.16959989940266,0.658650345873152,0.805238512562231,12.8276868624118,5.9684675179985,0.330418782983798,0.528901133327089,2.55945900642281,2.55460339046482,1.41754207454303,0.403367049246685,0.889512175379481,1.14135375667535,0,0.658795818896044,1.00534083520108,0.795825888164603,0.779856348476481,0,0,1.1948476395262,2.46568271239006,1.82797620175566,3.38123207019241,1.83286195060783,2.71533482034676,2.10407459670956,3.09859031908861,1.03327103585722,1.09899109488962,1.48076596706161,1.1858105083486,0.83422552858047,0,0.224862112384854,0,0.241177159752417,0.25462585178142,1.43848068725405,0.162135226775035,0,0,0,0,0,0,0.964887042726734,0.554259570499814,1.51593129416388,1.14075483509418,1.52770577197669,1.87752198630802,1.50755631697634,0.714130922658041,1.75620283072019,0.472905432318573,1.32878813789265,0.797273843287435,0.983179888294428,0.345369963731791,0.578596234326046,0,0,0,0,6.90367536947505,7.501547941901,3.11476396215683,1.51482556322624,4.73262329124385,3.90438744296638,7.53981892064796,2.38968797952552,4.01037613348309,3.96307143104365,4.45291771842384,4.67609372658099,8.69633111482352,9.63963949265421,1.41940085208269,6.7664929393557,5.37526965866801,6.92874516484649,1.32745138339963,1.69946445308487,2.41858845571801,1.50884063804718,2.36241514304618,1.53717573971964,1.29214146584111,0,1.06949213515416,0.948110273807448,0,0,5.10659408630682,1.44048875225048,4.01011919726539,2.7863814554107,5.67488747655275,4.63758925765383,3.78462747384878,3.04464949114599,0.469343416127421,0.63549621259146,1.10264199027481,1.15420377059036,0.968786560175433,0.422190474497091,0.835606408021955,0,0.582961673259701,6.67531087237835,0,1.44470807574256,1.29636169158798,0,0,0,0,0.139951452323658,0,0,2.37251995185852,2.43983360552218,1.72808545314882,2.92723614420256,1.52853794622324,1.07891477107857,1.73572257023205,0.26175594198403,1.42576470620972,0.621339313086926,0,1.94371509857172,1.65458490457098,2.72231663681667,1.93739735216597,2.87225413334323,4.3422178298929,2.3436789271911,1.8874681996628,0.724752362478018,0.288030006257865,0,0.608175645870493,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,1.81384306892169,3.55177525398503,0.269141569828427,1.84673078000486,2.51146472241848,1.12609485270709,4.57879060668163,1.50057865355346,0.501572104035363,9.03602948187307,4.14292712856459,4.01026859407578,7.56154002312225,6.16574267793578,4.5323633843382,4.72515750162264,7.65546045481175,4.07828168085784,8.80192529978094,1.14166082342594,0.399024873401031,2.39027048055788,4.37592090722929,1.25767897576789,1.10306105070008,3.11145418922261,1.44224540067226,0.64183841918363,2.27427490587418,0.50695859978048,1.69763707247469,2.43467919421694,1.28050304809739,1.60819313075717,2.85776214769844,1.50649623728312,1.92909220463705,0.824171801606613,1.47198920134397,1.37147700954166,1.4198064492747,2.62279808942053,1.45346416632329,1.50575008664529,1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|phase1_expression=6.72625157840135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,1.90509202037889,1.23012957516914,0,0,0,0,0,0,0,0,0,0,6.04304726282771,5.77848507951233,2.38610777810186,7.82391344348039,3.48840250208714,3.95435128922049,2.3331587888914,1.67983705950435,0,0,0,0,0.257259436035947,1.71920063963254,1.03134418455488,3.03474691289397,3.1739458756322,2.53532561402472,1.35537812827653,0,0.449949858640699,1.97773272513395,0.7104801149461,8.08920298399693,19.2109152660777,10.5763404554647,10.5304631898719,8.62332341540666,5.71301968807607,1.76694832761291,4.5321595709533,4.02550978276593,6.43453150627015,6.60695285996332,7.91661496128164,6.75868746327471,4.2203612073662,3.11057988248193,4.16730696445408,9.77140496504833,5.6276261003168,6.87592114995646,2.94628585473668,2.98980529678116,2.05039390407831,0.757261933331841,4.00529268565963,1.15945795480671,0.860423876981386,0,1.07940638327563,0.649776417447669,0.896053774194671,1.54488862144927,2.55645483867087,3.89679006904303,1.7666978725517,6.05626705039726,0,0,0,0,0,0,1.48439043634778,0.517875767294343,0.593768556259299,2.08182392119363,2.13125834818499,0.922461989024234,1.05505848386836,1.76383060703557,0,0.247194967734374,3.18118585223806,0,0.485300549842228,0.441683036920787,0.484875253135222,0,7.61230072230023,9.00620839297857,0.255457055208591,0.11981512450592,0,0,7.78911324905078,5.94750783664214,2.38743269014442,7.82209440865244,9.2057564638919,8.72709787150152,8.92326946872667,4.9901288286655,0.497627882440372,0.758168275301024,1.89397670297827,2.34216797332867,1.37941262660084,2.70093194708024,1.9591626318643,1.90502197623718,0.640568601424249,0.749613796477831,3.88055056108524,1.5089759505299,2.64748512234947,1.93546236580344,2.6303487891309,2.22437799380478,1.0447564995665,1.85203922767149,4.57778813682534,0,0,0,1.65700618028402,3.75241695969754,1.98068267607116,1.89395788468168,2.75469924446365,2.1597395804233,2.79040733700489,1.60964040839772,1.05088808130453,0.658239399653922,0.656669856316381,1.4592385718254,1.16959989940266,0.658650345873152,0.805238512562231,12.8276868624118,5.9684675179985,0.330418782983798,0.528901133327089,2.55945900642281,2.55460339046482,1.41754207454303,0.403367049246685,0.889512175379481,1.14135375667535,0,0.658795818896044,1.00534083520108,0.795825888164603,0.779856348476481,0,0,1.1948476395262,2.46568271239006,1.82797620175566,3.38123207019241,1.83286195060783,2.71533482034676,2.10407459670956,3.09859031908861,1.03327103585722,1.09899109488962,1.48076596706161,1.1858105083486,0.83422552858047,0,0.224862112384854,0,0.241177159752417,0.25462585178142,1.43848068725405,0.162135226775035,0,0,0,0,0,0,0.964887042726734,0.554259570499814,1.51593129416388,1.14075483509418,1.52770577197669,1.87752198630802,1.50755631697634,0.714130922658041,1.75620283072019,0.472905432318573,1.32878813789265,0.797273843287435,0.983179888294428,0.345369963731791,0.578596234326046,0,0,0,0,6.90367536947505,7.501547941901,3.11476396215683,1.51482556322624,4.73262329124385,3.90438744296638,7.53981892064796,2.38968797952552,4.01037613348309,3.96307143104365,4.45291771842384,4.67609372658099,8.69633111482352,9.63963949265421,1.41940085208269,6.7664929393557,5.37526965866801,6.92874516484649,1.32745138339963,1.69946445308487,2.41858845571801,1.50884063804718,2.36241514304618,1.53717573971964,1.29214146584111,0,1.06949213515416,0.948110273807448,0,0,5.10659408630682,1.44048875225048,4.01011919726539,2.7863814554107,5.67488747655275,4.63758925765383,3.78462747384878,3.04464949114599,0.469343416127421,0.63549621259146,1.10264199027481,1.15420377059036,0.968786560175433,0.422190474497091,0.835606408021955,0,0.582961673259701,6.67531087237835,0,1.44470807574256,1.29636169158798,0,0,0,0,0.139951452323658,0,0,2.37251995185852,2.43983360552218,1.72808545314882,2.92723614420256,1.52853794622324,1.07891477107857,1.73572257023205,0.26175594198403,1.42576470620972,0.621339313086926,0,1.94371509857172,1.65458490457098,2.72231663681667,1.93739735216597,2.87225413334323,4.3422178298929,2.3436789271911,1.8874681996628,0.724752362478018,0.288030006257865,0,0.608175645870493,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,1.81384306892169,3.55177525398503,0.269141569828427,1.84673078000486,2.51146472241848,1.12609485270709,4.57879060668163,1.50057865355346,0.501572104035363,9.03602948187307,4.14292712856459,4.01026859407578,7.56154002312225,6.16574267793578,4.5323633843382,4.72515750162264,7.65546045481175,4.07828168085784,8.80192529978094,1.14166082342594,0.399024873401031,2.39027048055788,4.37592090722929,1.25767897576789,1.10306105070008,3.11145418922261,1.44224540067226,0.64183841918363,2.27427490587418,0.50695859978048,1.69763707247469,2.43467919421694,1.28050304809739,1.60819313075717,2.85776214769844,1.50649623728312,1.92909220463705,0.824171801606613,1.47198920134397,1.37147700954166,1.4198064492747,2.62279808942053,1.45346416632329,1.50575008664529,1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| ||
|short_description=p1@Car11 | |short_description=p1@Car11 | ||
}} | }} |
Latest revision as of 21:41, 26 September 2015
Short description: | p1@Car11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Car11_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000137294_5end |
EntrezGene: | Car11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.19e-17 | 44 |
neurectodermal cell | 3.19e-17 | 44 |
neural cell | 1.18e-16 | 43 |
neuron | 2.23e-15 | 33 |
neuronal stem cell | 2.23e-15 | 33 |
neuroblast | 2.23e-15 | 33 |
electrically signaling cell | 2.23e-15 | 33 |
electrically responsive cell | 4.77e-15 | 39 |
electrically active cell | 4.77e-15 | 39 |
CNS neuron (sensu Vertebrata) | 6.90e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.90e-11 | 23 |
embryonic cell | 8.67e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.20e-36 | 73 |
nervous system | 3.41e-35 | 75 |
ectoderm-derived structure | 9.55e-28 | 95 |
ectoderm | 9.55e-28 | 95 |
presumptive ectoderm | 9.55e-28 | 95 |
regional part of nervous system | 2.46e-27 | 54 |
neurectoderm | 3.88e-26 | 64 |
neural plate | 3.88e-26 | 64 |
presumptive neural plate | 3.88e-26 | 64 |
neural tube | 6.28e-26 | 52 |
neural rod | 6.28e-26 | 52 |
future spinal cord | 6.28e-26 | 52 |
neural keel | 6.28e-26 | 52 |
brain | 5.56e-25 | 47 |
future brain | 5.56e-25 | 47 |
regional part of brain | 3.50e-24 | 46 |
ecto-epithelium | 6.02e-22 | 73 |
structure with developmental contribution from neural crest | 1.73e-21 | 92 |
anterior neural tube | 2.43e-20 | 40 |
regional part of forebrain | 1.18e-19 | 39 |
forebrain | 1.18e-19 | 39 |
future forebrain | 1.18e-19 | 39 |
pre-chordal neural plate | 9.07e-19 | 49 |
gray matter | 1.06e-16 | 34 |
brain grey matter | 8.85e-16 | 29 |
regional part of telencephalon | 8.85e-16 | 29 |
telencephalon | 8.85e-16 | 29 |
cerebral cortex | 3.05e-12 | 21 |
cerebral hemisphere | 3.05e-12 | 21 |
pallium | 3.05e-12 | 21 |
anatomical conduit | 1.49e-09 | 122 |
regional part of cerebral cortex | 1.82e-09 | 17 |
tube | 3.50e-09 | 114 |