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FFCP PHASE1:Mm9::chr9:57613416..57613439,-: Difference between revisions

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{{FFCP|EntrezGene=102414|HGNC=|MCL_coexpression_id=15|UniProt=O35492|association_with_transcript=227bp_to_ENSMUST00000065330,NM_007713,uc009pvr.1,uc009pvs.1_5end|description=CAGE_peak_4_at_Clk3_5end|id=chr9:57613416..57613439,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!2.11e-10!51;UBERON:0004177!1.34e-08!29;UBERON:0002405!1.17e-07!70;UBERON:0003929!1.32e-07!55;UBERON:0000490!2.49e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0004177,9.37e-11,29;UBERON:0005057,9.37e-11,29;UBERON:0003929,2.95e-10,55;UBERON:0000490,6.83e-09,66;UBERON:0002390,1.30e-08,45;UBERON:0003061,1.30e-08,45;UBERON:0000077,6.97e-08,35;UBERON:0005911,1.10e-07,69;UBERON:0001041,1.24e-07,80;UBERON:0003408,1.55e-07,24;UBERON:0002370,1.76e-07,23;UBERON:0000974,1.76e-07,23;UBERON:0004807,1.76e-07,23;UBERON:0005058,1.76e-07,23;UBERON:0003351,1.76e-07,23;UBERON:0009113,1.76e-07,23;UBERON:0003295,1.76e-07,23;UBERON:0009722,1.76e-07,23;UBERON:0005562,1.76e-07,23;UBERON:0007690,1.76e-07,23;UBERON:0002193,2.57e-07,48;UBERON:0002405,2.57e-07,48;UBERON:0006562,7.42e-07,24;UBERON:0001557,7.42e-07,24;UBERON:0001042,7.42e-07,24;UBERON:0008814,7.42e-07,24;UBERON:0009145,7.42e-07,24;UBERON:0002368,8.65e-07,60|phase1_expression=1.44133962394315,1.04692622291808,3.18499467572675,4.23449895829562,1.50268718983904,2.35030980676646,0.467225281191051,2.7115897922731,2.956563165185,3.97909694747389,0.856089841127525,0.159544317990673,2.05440875917447,2.53519167015092,5.99597571268193,6.2767332890846,8.39474253753776,0.157731082679119,0,0,0.765389611359628,0.992909512008853,0.522399578277871,0.799962113967033,0.91763712426868,2.8711598205751,1.29228598847722,2.15471232685889,0.950117097281869,0.756090389279792,0.443461021310609,0.635030673459631,0.61506478758457,0,1.1554064790051,0.498703936075477,0.408338712524738,0.418531630736908,0.7813353445238,0.523523743973798,2.94115744015507,0,0,0.881277725829041,0.811015449756117,0.734187008646726,0,0.436050312760893,0.878744730937887,1.36100929351998,0.419959264876088,0,0.838913030288682,2.17608642603403,1.68046899571232,3.08711323243136,2.57880095944881,2.57836046138721,1.21389876515759,0,1.26766280701236,1.35537812827653,2.66788438833342,0.899899717281399,2.96659908770092,2.1314403448383,0.898800331555214,0,0.518448061542388,1.08004750665353,0.630974884054146,0.571301968807607,0.441737081903227,1.34739879136449,0.766763768145891,2.75765635983006,2.20231761998777,0.127687338085188,0.768032666281217,0.395658863190582,0.548925861614458,0.52091337055676,0.279182999001381,1.12552522006336,0.61119299110724,1.76777151284201,0.854230084794618,0.372798891650601,0.605809546665472,0.604572480854284,0.869593466105033,0,2.03991400112325,1.07940638327563,0.649776417447669,0,1.12355536105401,0.681721290312231,0.779358013808606,1.06001872353102,0.704217098883403,1.28326477414318,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.11418387971906,0.517875767294343,1.1875371125186,1.90833859442749,1.21786191324856,0.461230994512117,0.60289056221049,0.705532242814229,0.879666139307728,0.247194967734374,0.722996784599558,1.76922110389975,1.45590164952668,2.42925670306433,2.90925151881133,0,0.878342391034642,0.41889341362691,0.766371165625774,1.55759661857696,1.19980546198682,1.52484272487678,0.449371918214468,0,1.13088916901578,1.91206752211504,1.53429274398198,1.45451631191692,0.324482526135515,2.24046600470696,3.73220911830279,1.0108910337347,0.631325567659422,0.910843100738926,1.14951052216736,0.360124259610698,0.150704817835715,0.748401490664606,0.512454881139399,0.843315521037559,0.517406741478031,0.215567992932842,0.945530400839096,1.23165786914764,0.876782929710299,1.11218899690239,0.696504333044333,0.823128545631774,1.59227413454795,0,1.28673953557358,1.42081749697796,1.44988040774851,1.17263029990548,0.540186184383045,0.946978942340841,1.18058539048442,0.462801338662135,0.930135779001631,0.804820204198858,0.700592054203017,1.15191894939436,0.492502392237286,0.486412857275134,0.438599962275997,0.439100230582101,0.134206418760372,0.841159794256509,1.3377599609307,0.991256348951394,0.264450566663544,0.639864751605702,0.464473343720877,0.38660238396628,0.403367049246685,0.667134131534611,0.570676878337677,0,0.164698954724011,1.25667604400135,0.795825888164603,0.38992817423824,1.79763881730844,0.432276099749388,0.398282546508734,0.189667900953082,0.685491075658373,0,0.814605311381257,0,0.701358198903186,0.569128834118316,0.295220295959204,0.470996183524124,0.123397163921801,1.77871576252289,4.83850806576673,6.4864468387357,9.44420872016386,8.92584534109413,4.82354319504834,11.4581633301639,4.60313819921297,2.10775794807546,1.09824565275233,1.43768206527355,1.48856379067401,0,1.51547326768267,2.15276896226295,0.482443521363367,1.29327233116623,0.757965647081939,0.977789858652155,1.18821560042632,0.469380496577004,0.670025029767263,1.42826184531608,1.36593553500459,0.157635144106191,1.99318220683897,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=102414
|HGNC=
|MCL_coexpression_id=15
|TSSclassifier=NA
|UniProt=O35492
|association_with_transcript=227bp_to_ENSMUST00000065330,NM_007713,uc009pvr.1,uc009pvs.1_5end
|cluster_id=chr9:57613416..57613439,-
|description=CAGE_peak_4_at_Clk3_5end
|id=chr9:57613416..57613439,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004177,9.37e-11,29;UBERON:0005057,9.37e-11,29;UBERON:0003929,2.95e-10,55;UBERON:0000490,6.83e-09,66;UBERON:0002390,1.30e-08,45;UBERON:0003061,1.30e-08,45;UBERON:0000077,6.97e-08,35;UBERON:0005911,1.10e-07,69;UBERON:0001041,1.24e-07,80;UBERON:0003408,1.55e-07,24;UBERON:0002370,1.76e-07,23;UBERON:0000974,1.76e-07,23;UBERON:0004807,1.76e-07,23;UBERON:0005058,1.76e-07,23;UBERON:0003351,1.76e-07,23;UBERON:0009113,1.76e-07,23;UBERON:0003295,1.76e-07,23;UBERON:0009722,1.76e-07,23;UBERON:0005562,1.76e-07,23;UBERON:0007690,1.76e-07,23;UBERON:0002193,2.57e-07,48;UBERON:0002405,2.57e-07,48;UBERON:0006562,7.42e-07,24;UBERON:0001557,7.42e-07,24;UBERON:0001042,7.42e-07,24;UBERON:0008814,7.42e-07,24;UBERON:0009145,7.42e-07,24;UBERON:0002368,8.65e-07,60
|phase1_expression=1.44133962394315,1.04692622291808,3.18499467572675,4.23449895829562,1.50268718983904,2.35030980676646,0.467225281191051,2.7115897922731,2.956563165185,3.97909694747389,0.856089841127525,0.159544317990673,2.05440875917447,2.53519167015092,5.99597571268193,6.2767332890846,8.39474253753776,0.157731082679119,0,0,0.765389611359628,0.992909512008853,0.522399578277871,0.799962113967033,0.91763712426868,2.8711598205751,1.29228598847722,2.15471232685889,0.950117097281869,0.756090389279792,0.443461021310609,0.635030673459631,0.61506478758457,0,1.1554064790051,0.498703936075477,0.408338712524738,0.418531630736908,0.7813353445238,0.523523743973798,2.94115744015507,0,0,0.881277725829041,0.811015449756117,0.734187008646726,0,0.436050312760893,0.878744730937887,1.36100929351998,0.419959264876088,0,0.838913030288682,2.17608642603403,1.68046899571232,3.08711323243136,2.57880095944881,2.57836046138721,1.21389876515759,0,1.26766280701236,1.35537812827653,2.66788438833342,0.899899717281399,2.96659908770092,2.1314403448383,0.898800331555214,0,0.518448061542388,1.08004750665353,0.630974884054146,0.571301968807607,0.441737081903227,1.34739879136449,0.766763768145891,2.75765635983006,2.20231761998777,0.127687338085188,0.768032666281217,0.395658863190582,0.548925861614458,0.52091337055676,0.279182999001381,1.12552522006336,0.61119299110724,1.76777151284201,0.854230084794618,0.372798891650601,0.605809546665472,0.604572480854284,0.869593466105033,0,2.03991400112325,1.07940638327563,0.649776417447669,0,1.12355536105401,0.681721290312231,0.779358013808606,1.06001872353102,0.704217098883403,1.28326477414318,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.11418387971906,0.517875767294343,1.1875371125186,1.90833859442749,1.21786191324856,0.461230994512117,0.60289056221049,0.705532242814229,0.879666139307728,0.247194967734374,0.722996784599558,1.76922110389975,1.45590164952668,2.42925670306433,2.90925151881133,0,0.878342391034642,0.41889341362691,0.766371165625774,1.55759661857696,1.19980546198682,1.52484272487678,0.449371918214468,0,1.13088916901578,1.91206752211504,1.53429274398198,1.45451631191692,0.324482526135515,2.24046600470696,3.73220911830279,1.0108910337347,0.631325567659422,0.910843100738926,1.14951052216736,0.360124259610698,0.150704817835715,0.748401490664606,0.512454881139399,0.843315521037559,0.517406741478031,0.215567992932842,0.945530400839096,1.23165786914764,0.876782929710299,1.11218899690239,0.696504333044333,0.823128545631774,1.59227413454795,0,1.28673953557358,1.42081749697796,1.44988040774851,1.17263029990548,0.540186184383045,0.946978942340841,1.18058539048442,0.462801338662135,0.930135779001631,0.804820204198858,0.700592054203017,1.15191894939436,0.492502392237286,0.486412857275134,0.438599962275997,0.439100230582101,0.134206418760372,0.841159794256509,1.3377599609307,0.991256348951394,0.264450566663544,0.639864751605702,0.464473343720877,0.38660238396628,0.403367049246685,0.667134131534611,0.570676878337677,0,0.164698954724011,1.25667604400135,0.795825888164603,0.38992817423824,1.79763881730844,0.432276099749388,0.398282546508734,0.189667900953082,0.685491075658373,0,0.814605311381257,0,0.701358198903186,0.569128834118316,0.295220295959204,0.470996183524124,0.123397163921801,1.77871576252289,4.83850806576673,6.4864468387357,9.44420872016386,8.92584534109413,4.82354319504834,11.4581633301639,4.60313819921297,2.10775794807546,1.09824565275233,1.43768206527355,1.48856379067401,0,1.51547326768267,2.15276896226295,0.482443521363367,1.29327233116623,0.757965647081939,0.977789858652155,1.18821560042632,0.469380496577004,0.670025029767263,1.42826184531608,1.36593553500459,0.157635144106191,1.99318220683897,0.637819074629948,0.983179888294428,0.518054945597687,0.578596234326046,0,0.54390568381871,1.47529281905711,0.551873492609465,0.963303539926752,0.937693492737625,0.327869890753351,1.26235463602186,0.315508219416257,1.17131623288992,1.07711698866399,0.955875191810208,1.33679204449436,0.283076530788832,0.404810701674894,0.876767573733936,1.58115111178609,0.963963949265421,1.27746076687442,1.78065603667255,0.488660878060728,0.494910368917606,1.32745138339963,0.728341908464944,0,0.188605079755898,0.885905678642318,0,0.258428293168221,0.363533729477506,0.712994756769443,0,1.05418608574999,0,0.680879211507576,0.36012218806262,0.517434735131018,0.214337035031592,1.06404140185364,0.356737635204141,1.15184314421485,0.913394847343798,0.469343416127421,1.48282449604674,0.661585194164886,2.30840754118072,0.322928853391811,0.603129249281559,0.835606408021955,0.984845398470368,0.582961673259701,0.741701208042039,5.80960994712699,1.44470807574256,2.77791791054568,4.52084296811258,4.51090951479383,6.63456702298916,3.39956859987711,3.91864066506242,2.3493995546752,1.90934123603023,1.42351197111511,1.01659733563424,0.86404272657441,0.418176592028937,0.87345025498471,0.809186078308924,1.07449492442937,0.785267825952089,0.648074866458964,1.24267862617385,1.69107881605257,0.747582730219894,0.992750942742586,1.16670713006429,1.6790777052105,0.675824501963113,0.938857909166032,0.5208175393758,1.36317147753424,0.241584120826006,0.288030006257865,7.2682557744481,1.21635129174099,0.718976700153791,2.5984164595559,2.32734704367726,5.16571522431289,6.73094517311826,4.28299628806274,6.15895344683701,8.23033511873998,7.36031151498936,6.72459377104292,6.5424052315424,7.71387554398355,0.453460767230423,0.221985953374065,0.358855426437903,0.167884616364078,0.386379188064381,0.563047426353546,0.549454872801795,0.428736758158132,0.501572104035363,1.12950368523413,1.84130094602871,1.14579102687879,1.89038500578056,0,2.2661816921691,1.35004500046361,0.45032120322422,1.35942722695261,1.55328093525546,0.726511433089237,1.19707462020309,2.21953687480374,2.18796045361465,1.25767897576789,3.12533964365024,1.11123363900808,0.618105171716683,1.92551525755089,2.27427490587418,0.50695859978048,1.32038438970253,1.68554713445788,0.960377286073039,0.631790158511746,0.476293691283074,1.62238056322798,0.964546102318525,2.06042950401653,1.61918812147837,3.08582327146874,1.24233064311536,1.43061713968393,1.30811774969096,1.41164070622996,1.18460451048347,1.09756783723664,0.526139422875686,1.49384525230448,1.68342681497322,2.01679530811096,1.47756723563345,0.409231043169689,0.929621047115796,1.15743966588685,0.749431733813838,1.40358965067245,1.28922632428979,1.14772999241306,2.42650561031467,0.695603506861264
|short_description=p4@Clk3
}}

Latest revision as of 21:42, 26 September 2015

Short description:p4@Clk3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Clk3_5end
Coexpression cluster:MCL_coexpression_mm9:15
Association with transcript: 227bp_to_ENSMUST00000065330, NM_007713, uc009pvr.1, uc009pvs.1_5end
EntrezGene:Clk3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Clk3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E19.44
liver, embryo E15.CNhs10520.433-16D78.93
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A311.46
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G25.81
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D14.52
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G36.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B57.27
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F86.73
thymus, neonate N03.CNhs11137.2104-43C74.28
thymus, neonate N06.CNhs11197.681-26C46.16
thymus, neonate N07.CNhs11211.713-19D38.23
thymus, neonate N10.CNhs11194.748-24E47.36
thymus, neonate N20.CNhs11186.820-7A26.72
thymus, neonate N25.CNhs11125.1362-25G76.54
thymus, neonate N30.CNhs11132.1393-42G27.71
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ9.37e-1129
immune organ9.37e-1129
gut epithelium2.95e-1055
unilaminar epithelium6.83e-0966
hematopoietic system1.30e-0845
blood island1.30e-0845
mixed endoderm/mesoderm-derived structure6.97e-0835
endo-epithelium1.10e-0769
foregut1.24e-0780
gland of gut1.55e-0724
thymus1.76e-0723
neck1.76e-0723
respiratory system epithelium1.76e-0723
hemolymphoid system gland1.76e-0723
pharyngeal epithelium1.76e-0723
thymic region1.76e-0723
pharyngeal gland1.76e-0723
entire pharyngeal arch endoderm1.76e-0723
thymus primordium1.76e-0723
early pharyngeal endoderm1.76e-0723
hemolymphoid system2.57e-0748
immune system2.57e-0748
pharynx7.42e-0724
upper respiratory tract7.42e-0724
chordate pharynx7.42e-0724
pharyngeal arch system7.42e-0724
pharyngeal region of foregut7.42e-0724
endocrine gland8.65e-0760
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