FFCP PHASE1:Mm9::chr7:53651809..53651909,+: Difference between revisions
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{{FFCP|EntrezGene=16502|HGNC=|MCL_coexpression_id=121|UniProt=P15388,E9PVV3,Q3TR92,Q3UHB6|association_with_transcript=0bp_to_ENSMUST00000025202,NM_001112739,NM_008421,uc009gyn.2,uc009gyo.2_5end|description=CAGE_peak_1_at_Kcnc1_5end|id=chr7:53651809..53651909,+|ontology_enrichment_celltype=CL:0000540!1.57e-16!33;CL:0000047!1.57e-16!33;CL:0000031!1.57e-16!33;CL:0000404!1.57e-16!33;CL:0000221!1.08e-15!44;CL:0000133!1.08e-15!44;CL:0002319!1.26e-15!43;CL:0000117!5.23e-13!23;CL:0000337!5.23e-13!23;CL:0000393!1.32e-10!39;CL:0000211!1.32e-10!39;CL:0000055!1.37e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.32e-19,33;CL:0000047,1.32e-19,33;CL:0000031,1.32e-19,33;CL:0000404,1.32e-19,33;CL:0000221,5.96e-18,44;CL:0000133,5.96e-18,44;CL:0002319,7.24e-18,43;CL:0000117,2.34e-15,23;CL:0000337,2.34e-15,23;CL:0000393,2.94e-14,39;CL:0000211,2.94e-14,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.98e-34!73;UBERON:0005743!1.98e-34!73;UBERON:0000073!9.24e-34!75;UBERON:0001016!9.24e-34!75;UBERON:0004121!5.85e-32!102;UBERON:0000924!5.85e-32!102;UBERON:0006601!5.85e-32!102;UBERON:0002346!6.02e-27!71;UBERON:0003075!6.02e-27!71;UBERON:0007284!6.02e-27!71;UBERON:0000033!8.22e-26!63;UBERON:0001049!1.08e-25!52;UBERON:0005068!1.08e-25!52;UBERON:0006241!1.08e-25!52;UBERON:0007135!1.08e-25!52;UBERON:0000955!7.99e-25!50;UBERON:0006238!7.99e-25!50;UBERON:0002616!4.07e-24!49;UBERON:0003056!6.60e-20!49;UBERON:0003080!1.37e-18!40;UBERON:0002020!6.03e-18!34;UBERON:0002780!7.30e-18!39;UBERON:0001890!7.30e-18!39;UBERON:0006240!7.30e-18!39;UBERON:0002791!4.61e-15!29;UBERON:0003528!4.61e-15!29;UBERON:0001893!4.61e-15!29;UBERON:0007811!9.44e-15!86;UBERON:0000153!1.57e-13!94;UBERON:0000956!1.54e-10!21;UBERON:0001869!1.54e-10!21;UBERON:0000203!1.54e-10!21;UBERON:0002619!5.89e-09!17;UBERON:0003076!1.16e-07!12;UBERON:0003057!1.16e-07!12;UBERON:0002021!4.86e-07!10;UBERON:0000411!4.86e-07!10;UBERON:0001950!4.86e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-41,73;UBERON:0001016,1.25e-39,75;UBERON:0004121,3.18e-37,95;UBERON:0000924,3.18e-37,95;UBERON:0006601,3.18e-37,95;UBERON:0002346,3.14e-33,64;UBERON:0003075,3.14e-33,64;UBERON:0007284,3.14e-33,64;UBERON:0000073,1.40e-32,54;UBERON:0001049,1.15e-30,52;UBERON:0005068,1.15e-30,52;UBERON:0006241,1.15e-30,52;UBERON:0007135,1.15e-30,52;UBERON:0010371,4.84e-30,73;UBERON:0000955,7.42e-27,47;UBERON:0006238,7.42e-27,47;UBERON:0002616,5.08e-26,46;UBERON:0003056,9.71e-23,49;UBERON:0003080,4.30e-22,40;UBERON:0002020,2.58e-21,34;UBERON:0002780,3.25e-21,39;UBERON:0001890,3.25e-21,39;UBERON:0006240,3.25e-21,39;UBERON:0010314,3.32e-20,92;UBERON:0003528,7.77e-18,29;UBERON:0002791,7.77e-18,29;UBERON:0001893,7.77e-18,29;UBERON:0000956,2.22e-12,21;UBERON:0001869,2.22e-12,21;UBERON:0000203,2.22e-12,21;UBERON:0002619,1.78e-10,17;UBERON:0003076,6.45e-09,12;UBERON:0003057,6.45e-09,12;UBERON:0002021,3.61e-08,10;UBERON:0000411,3.61e-08,10;UBERON:0001950,3.61e-08,10|phase1_expression=2.40223270657191,0,0,0,0,1.00727563147134,1.16806320297763,0,0.281577444303333,0.234064526321993,0.171217968225505,0.159544317990673,0.171200729931206,0,0,0.404950534779652,0,1.26184866143295,0.411343300817216,0.42438965179803,35.378008702845,0.297872853602656,0,0,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,16.5699118849139,1.97717564461025,3.88859798148567,4.4795654920116,0,0.335565212115473,0,10.4189077734164,0,0,0,34.7984312678508,37.5583595283143,38.6637156138769,0.677689064138264,0,0,0,0,7.78960287347852,12.6792040756113,13.1685807631767,12.9605700798423,14.7227472945967,87.6948522119677,68.2483791540486,18.1286382838132,15.9103481890272,27.5765635983006,296.211719888356,262.908229117402,244.695207477196,37.9832508662958,41.4439025518916,38.5475894212002,251.264699101243,131.123688137381,154.937423245685,77.7819465650483,65.4909731675874,51.8190459394336,0.37863096666592,0.906858721281426,0,0.860423876981386,0.679971333707751,0.539703191637817,0,0.896053774194671,18.679107877523,0,0,0,3.80277233397037,0,0,0,0,0,0,6.8510327831436,1.8125651855302,1.48442139064825,1.73485326766136,0,1.61430848079241,1.50722640552623,2.11659672844269,0.251333182659351,0,0.289198713839823,12.3845477272982,10.1913115466868,14.1338571814652,13.5765070877862,0,484.844999851122,516.076685588353,1.27728527604296,0.11981512450592,0,0,271.420638601539,111.172646484926,31.539242380329,123.241443016324,110.213362109372,206.125740203084,142.610070236559,0.101839363850316,7.0911973247753,0,19.7815344533286,0.260240885925407,0.919608417733892,3.24111833649629,5.12396380641431,11.0899493616664,14.0925092313335,14.4300655821982,36.2184719034622,0,0.945530400839096,0.351902248327898,0.657587197282725,0,2.43776516565517,1.02891068203972,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,78.6484407629836,27.4755315052689,1.65209391491899,1.05780226665418,0.426576501070468,0.232236671860439,2.061879381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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16502 | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|TSSclassifier=NA | |||
|UniProt=P15388,E9PVV3,Q3TR92,Q3UHB6 | |||
|association_with_transcript=0bp_to_ENSMUST00000025202,NM_001112739,NM_008421,uc009gyn.2,uc009gyo.2_5end | |||
|cluster_id=chr7:53651809..53651909,+ | |||
|description=CAGE_peak_1_at_Kcnc1_5end | |||
|id=chr7:53651809..53651909,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.57e-16!33;CL:0000047!1.57e-16!33;CL:0000031!1.57e-16!33;CL:0000404!1.57e-16!33;CL:0000221!1.08e-15!44;CL:0000133!1.08e-15!44;CL:0002319!1.26e-15!43;CL:0000117!5.23e-13!23;CL:0000337!5.23e-13!23;CL:0000393!1.32e-10!39;CL:0000211!1.32e-10!39;CL:0000055!1.37e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.32e-19,33;CL:0000047,1.32e-19,33;CL:0000031,1.32e-19,33;CL:0000404,1.32e-19,33;CL:0000221,5.96e-18,44;CL:0000133,5.96e-18,44;CL:0002319,7.24e-18,43;CL:0000117,2.34e-15,23;CL:0000337,2.34e-15,23;CL:0000393,2.94e-14,39;CL:0000211,2.94e-14,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.98e-34!73;UBERON:0005743!1.98e-34!73;UBERON:0000073!9.24e-34!75;UBERON:0001016!9.24e-34!75;UBERON:0004121!5.85e-32!102;UBERON:0000924!5.85e-32!102;UBERON:0006601!5.85e-32!102;UBERON:0002346!6.02e-27!71;UBERON:0003075!6.02e-27!71;UBERON:0007284!6.02e-27!71;UBERON:0000033!8.22e-26!63;UBERON:0001049!1.08e-25!52;UBERON:0005068!1.08e-25!52;UBERON:0006241!1.08e-25!52;UBERON:0007135!1.08e-25!52;UBERON:0000955!7.99e-25!50;UBERON:0006238!7.99e-25!50;UBERON:0002616!4.07e-24!49;UBERON:0003056!6.60e-20!49;UBERON:0003080!1.37e-18!40;UBERON:0002020!6.03e-18!34;UBERON:0002780!7.30e-18!39;UBERON:0001890!7.30e-18!39;UBERON:0006240!7.30e-18!39;UBERON:0002791!4.61e-15!29;UBERON:0003528!4.61e-15!29;UBERON:0001893!4.61e-15!29;UBERON:0007811!9.44e-15!86;UBERON:0000153!1.57e-13!94;UBERON:0000956!1.54e-10!21;UBERON:0001869!1.54e-10!21;UBERON:0000203!1.54e-10!21;UBERON:0002619!5.89e-09!17;UBERON:0003076!1.16e-07!12;UBERON:0003057!1.16e-07!12;UBERON:0002021!4.86e-07!10;UBERON:0000411!4.86e-07!10;UBERON:0001950!4.86e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-41,73;UBERON:0001016,1.25e-39,75;UBERON:0004121,3.18e-37,95;UBERON:0000924,3.18e-37,95;UBERON:0006601,3.18e-37,95;UBERON:0002346,3.14e-33,64;UBERON:0003075,3.14e-33,64;UBERON:0007284,3.14e-33,64;UBERON:0000073,1.40e-32,54;UBERON:0001049,1.15e-30,52;UBERON:0005068,1.15e-30,52;UBERON:0006241,1.15e-30,52;UBERON:0007135,1.15e-30,52;UBERON:0010371,4.84e-30,73;UBERON:0000955,7.42e-27,47;UBERON:0006238,7.42e-27,47;UBERON:0002616,5.08e-26,46;UBERON:0003056,9.71e-23,49;UBERON:0003080,4.30e-22,40;UBERON:0002020,2.58e-21,34;UBERON:0002780,3.25e-21,39;UBERON:0001890,3.25e-21,39;UBERON:0006240,3.25e-21,39;UBERON:0010314,3.32e-20,92;UBERON:0003528,7.77e-18,29;UBERON:0002791,7.77e-18,29;UBERON:0001893,7.77e-18,29;UBERON:0000956,2.22e-12,21;UBERON:0001869,2.22e-12,21;UBERON:0000203,2.22e-12,21;UBERON:0002619,1.78e-10,17;UBERON:0003076,6.45e-09,12;UBERON:0003057,6.45e-09,12;UBERON:0002021,3.61e-08,10;UBERON:0000411,3.61e-08,10;UBERON:0001950,3.61e-08,10 | |||
|phase1_expression=2.40223270657191,0,0,0,0,1.00727563147134,1.16806320297763,0,0.281577444303333,0.234064526321993,0.171217968225505,0.159544317990673,0.171200729931206,0,0,0.404950534779652,0,1.26184866143295,0.411343300817216,0.42438965179803,35.378008702845,0.297872853602656,0,0,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,16.5699118849139,1.97717564461025,3.88859798148567,4.4795654920116,0,0.335565212115473,0,10.4189077734164,0,0,0,34.7984312678508,37.5583595283143,38.6637156138769,0.677689064138264,0,0,0,0,7.78960287347852,12.6792040756113,13.1685807631767,12.9605700798423,14.7227472945967,87.6948522119677,68.2483791540486,18.1286382838132,15.9103481890272,27.5765635983006,296.211719888356,262.908229117402,244.695207477196,37.9832508662958,41.4439025518916,38.5475894212002,251.264699101243,131.123688137381,154.937423245685,77.7819465650483,65.4909731675874,51.8190459394336,0.37863096666592,0.906858721281426,0,0.860423876981386,0.679971333707751,0.539703191637817,0,0.896053774194671,18.679107877523,0,0,0,3.80277233397037,0,0,0,0,0,0,6.8510327831436,1.8125651855302,1.48442139064825,1.73485326766136,0,1.61430848079241,1.50722640552623,2.11659672844269,0.251333182659351,0,0.289198713839823,12.3845477272982,10.1913115466868,14.1338571814652,13.5765070877862,0,484.844999851122,516.076685588353,1.27728527604296,0.11981512450592,0,0,271.420638601539,111.172646484926,31.539242380329,123.241443016324,110.213362109372,206.125740203084,142.610070236559,0.101839363850316,7.0911973247753,0,19.7815344533286,0.260240885925407,0.919608417733892,3.24111833649629,5.12396380641431,11.0899493616664,14.0925092313335,14.4300655821982,36.2184719034622,0,0.945530400839096,0.351902248327898,0.657587197282725,0,2.43776516565517,1.02891068203972,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,78.6484407629836,27.4755315052689,1.65209391491899,1.05780226665418,0.426576501070468,0.232236671860439,2.06187938115349,1.81515172161008,0.667134131534611,1.14135375667535,0.949058123089023,0.823494773620054,0.754005626400808,0.795825888164603,1.16978452271472,2.69645822596266,0,0.597423819763102,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0.624075346229121,0.252578877947112,0.896987067609561,0,0.369506380333209,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,1.34005005953453,0.476087281772027,0.390267295715598,0.157635144106191,0,0.159454768657487,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0.983528546038072,0,235.206614332115,197.150056848086,0,56.8059586209839,20.8235424814729,14.8366722832723,38.1299413987054,10.5146271099123,12.0311284004493,24.6276581786284,31.5752347306418,32.4404002281556,30.4371589018823,125.957956037348,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,1.03371317267288,0,0.712994756769443,0.632073515871632,0,0,11.234506989875,2.70091641046965,1.94038025674132,1.71469628025274,10.1083933176096,12.3074484145429,14.6448628335888,21.312546438022,0,0.21183207086382,0.882113592219848,4.78170133530292,3.71368181400583,1.38719727334758,0.358117032009409,0.820704498725306,1.45740418314925,239.013214291547,0.512612642393558,0.206386867963223,0,0.188368457004691,0.546776910884101,0.686334519619568,0,0,0.138199973804424,0,0.474503990371703,1.21991680276109,1.94409613479242,0.836353184057875,1.31017538247707,0.674321731924103,0.41326727862668,0.26175594198403,0.518459893167171,0,3.38215763210514,0,0.165458490457098,0.583353565032143,0.516639293910924,0.844780627453891,0.469428954583016,0,0,0.966336483304024,7.77681016896237,1.58005560314089,0.202725215290164,0,0,0.358053391334963,0.39736270956253,0.120195449519969,0,0.302899349844443,0.304827226619999,0.504130925684203,0.682205165178267,0.577271049841977,0.701261413089414,47.8401109428096,0,0,0,0.579568782096571,0,0.73260649706906,0,0.501572104035363,63.8169582157285,59.842280745933,71.6119391799246,56.3678438087295,86.3203974911009,114.064478505845,77.6275875266577,117.984155244746,104.222754066367,121.673673261678,0.830298780673413,5.98537310101547,4.95127456686989,6.07766792670735,8.59413966774727,8.64064489715066,11.556829845684,10.3017528619447,9.94849549734627,9.34979683526051,8.61829619626815,11.6948331659367,7.30403758265083,10.9483010612326,10.6829972257441,9.52587382566147,9.85016770531272,10.6100071255038,11.1263193216893,9.86232764900462,6.85738504770831,7.98641127717019,7.62995807831427,8.1393993314104,8.84628175904108,9.39222147597609,10.2439664808753,6.05060336307039,6.79020569229309,10.1005608898393,9.37216643180976,8.96390789617628,9.00308294973317,10.5357052006457,7.52335782826451,22.982573170291,7.95367468714389,12.8922632428979,23.9110415086054,8.603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| |||
|short_description=p1@Kcnc1 | |||
}} |
Latest revision as of 22:20, 26 September 2015
Short description: | p1@Kcnc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | 0bp_to_ENSMUST00000025202, NM_001112739, NM_008421, uc009gyn.2, uc009gyo.2_5end |
EntrezGene: | Kcnc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.32e-19 | 33 |
neuronal stem cell | 1.32e-19 | 33 |
neuroblast | 1.32e-19 | 33 |
electrically signaling cell | 1.32e-19 | 33 |
ectodermal cell | 5.96e-18 | 44 |
neurectodermal cell | 5.96e-18 | 44 |
neural cell | 7.24e-18 | 43 |
CNS neuron (sensu Vertebrata) | 2.34e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.34e-15 | 23 |
electrically responsive cell | 2.94e-14 | 39 |
electrically active cell | 2.94e-14 | 39 |