FFCP PHASE1:Mm9::chr15:72640375..72640390,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:72640375..72640390,-
|short_description=p2@Peg13
|description=CAGE_peak_2_at_Peg13_5end
|association_with_transcript=363bp_to_NR_002864,uc007wbo.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=353342 | |EntrezGene=353342 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=363bp_to_NR_002864,uc007wbo.1_5end | |||
|cluster_id=chr15:72640375..72640390,- | |||
|description=CAGE_peak_2_at_Peg13_5end | |||
|id=chr15:72640375..72640390,- | |||
|ontology_enrichment_celltype=CL:0000117!2.76e-12!23;CL:0000337!2.76e-12!23;CL:0000540!2.78e-11!33;CL:0000047!2.78e-11!33;CL:0000031!2.78e-11!33;CL:0000404!2.78e-11!33;CL:0000393!3.79e-10!39;CL:0000211!3.79e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.72e-12,23;CL:0000337,2.72e-12,23;CL:0000540,2.74e-11,33;CL:0000047,2.74e-11,33;CL:0000031,2.74e-11,33;CL:0000404,2.74e-11,33;CL:0000393,3.75e-10,39;CL:0000211,3.75e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.42e-25!71;UBERON:0003075!3.42e-25!71;UBERON:0007284!3.42e-25!71;UBERON:0004121!4.04e-23!102;UBERON:0000924!4.04e-23!102;UBERON:0006601!4.04e-23!102;UBERON:0000033!4.25e-21!63;UBERON:0001017!2.15e-20!73;UBERON:0005743!2.15e-20!73;UBERON:0001049!4.24e-20!52;UBERON:0005068!4.24e-20!52;UBERON:0006241!4.24e-20!52;UBERON:0007135!4.24e-20!52;UBERON:0000073!1.36e-19!75;UBERON:0001016!1.36e-19!75;UBERON:0000955!1.58e-19!50;UBERON:0006238!1.58e-19!50;UBERON:0002616!7.51e-19!49;UBERON:0003056!5.25e-17!49;UBERON:0003080!7.91e-16!40;UBERON:0002020!3.01e-15!34;UBERON:0002780!3.95e-15!39;UBERON:0001890!3.95e-15!39;UBERON:0006240!3.95e-15!39;UBERON:0002791!6.65e-13!29;UBERON:0003528!6.65e-13!29;UBERON:0001893!6.65e-13!29;UBERON:0004111!8.92e-09!122;UBERON:0000956!1.44e-08!21;UBERON:0001869!1.44e-08!21;UBERON:0000203!1.44e-08!21;UBERON:0000025!4.82e-08!114;UBERON:0007811!7.73e-08!86;UBERON:0002619!5.18e-07!17;UBERON:0000153!5.54e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.45e-21,64;UBERON:0003075,1.45e-21,64;UBERON:0007284,1.45e-21,64;UBERON:0000073,2.15e-21,54;UBERON:0001017,1.68e-20,73;UBERON:0010314,1.71e-20,92;UBERON:0001049,4.14e-20,52;UBERON:0005068,4.14e-20,52;UBERON:0006241,4.14e-20,52;UBERON:0007135,4.14e-20,52;UBERON:0001016,1.07e-19,75;UBERON:0004121,1.18e-19,95;UBERON:0000924,1.18e-19,95;UBERON:0006601,1.18e-19,95;UBERON:0010371,5.16e-19,73;UBERON:0000955,1.42e-17,47;UBERON:0006238,1.42e-17,47;UBERON:0003056,5.15e-17,49;UBERON:0002616,6.52e-17,46;UBERON:0003080,7.77e-16,40;UBERON:0002020,2.95e-15,34;UBERON:0002780,3.88e-15,39;UBERON:0001890,3.88e-15,39;UBERON:0006240,3.88e-15,39;UBERON:0003528,6.55e-13,29;UBERON:0002791,6.55e-13,29;UBERON:0001893,6.55e-13,29;UBERON:0004111,8.74e-09,122;UBERON:0000956,1.43e-08,21;UBERON:0001869,1.43e-08,21;UBERON:0000203,1.43e-08,21;UBERON:0000025,4.72e-08,114;UBERON:0002619,5.14e-07,17 | |||
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| ||
|short_description=p2@Peg13 | |||
}} | }} |
Latest revision as of 22:38, 26 September 2015
Short description: | p2@Peg13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Peg13_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 363bp_to_NR_002864, uc007wbo.1_5end |
EntrezGene: | Peg13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.72e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.72e-12 | 23 |
neuron | 2.74e-11 | 33 |
neuronal stem cell | 2.74e-11 | 33 |
neuroblast | 2.74e-11 | 33 |
electrically signaling cell | 2.74e-11 | 33 |
electrically responsive cell | 3.75e-10 | 39 |
electrically active cell | 3.75e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.45e-21 | 64 |
neural plate | 1.45e-21 | 64 |
presumptive neural plate | 1.45e-21 | 64 |
regional part of nervous system | 2.15e-21 | 54 |
central nervous system | 1.68e-20 | 73 |
structure with developmental contribution from neural crest | 1.71e-20 | 92 |
neural tube | 4.14e-20 | 52 |
neural rod | 4.14e-20 | 52 |
future spinal cord | 4.14e-20 | 52 |
neural keel | 4.14e-20 | 52 |
nervous system | 1.07e-19 | 75 |
ectoderm-derived structure | 1.18e-19 | 95 |
ectoderm | 1.18e-19 | 95 |
presumptive ectoderm | 1.18e-19 | 95 |
ecto-epithelium | 5.16e-19 | 73 |
brain | 1.42e-17 | 47 |
future brain | 1.42e-17 | 47 |
pre-chordal neural plate | 5.15e-17 | 49 |
regional part of brain | 6.52e-17 | 46 |
anterior neural tube | 7.77e-16 | 40 |
gray matter | 2.95e-15 | 34 |
regional part of forebrain | 3.88e-15 | 39 |
forebrain | 3.88e-15 | 39 |
future forebrain | 3.88e-15 | 39 |
brain grey matter | 6.55e-13 | 29 |
regional part of telencephalon | 6.55e-13 | 29 |
telencephalon | 6.55e-13 | 29 |
anatomical conduit | 8.74e-09 | 122 |
cerebral cortex | 1.43e-08 | 21 |
cerebral hemisphere | 1.43e-08 | 21 |
pallium | 1.43e-08 | 21 |
tube | 4.72e-08 | 114 |
regional part of cerebral cortex | 5.14e-07 | 17 |