FFCP PHASE1:Mm9::chr9:59797875..59797929,-: Difference between revisions
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|id=chr9:59797875..59797929,-
|short_description=p1@Nr2e3
|description=CAGE_peak_1_at_Nr2e3_5end
|association_with_transcript=0bp_to_ENSMUST00000034831,ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=23958 | |EntrezGene=23958 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QXZ7,Q543C7 | |UniProt=Q9QXZ7,Q543C7 | ||
|association_with_transcript=0bp_to_ENSMUST00000034831,ENSMUST00000128108,ENSMUST00000138888,ENSMUST00000156845,NM_013708,uc009pyu.1,uc009pyv.1_5end | |||
|cluster_id=chr9:59797875..59797929,- | |||
|description=CAGE_peak_1_at_Nr2e3_5end | |||
|id=chr9:59797875..59797929,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.95e-09!9;UBERON:0000019!1.95e-09!9;UBERON:0000047!1.95e-09!9;UBERON:0004088!1.95e-09!9;UBERON:0002104!1.95e-09!9;UBERON:0001456!1.95e-09!9;UBERON:0003072!1.95e-09!9;UBERON:0003071!1.95e-09!9;UBERON:0004128!1.95e-09!9;UBERON:0001444!1.51e-07!11;UBERON:0000020!7.68e-07!12;UBERON:0001032!7.68e-07!12;UBERON:0004456!7.68e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.12e-32,9;UBERON:0000019,2.12e-32,9;UBERON:0000047,2.12e-32,9;UBERON:0010312,2.12e-32,9;UBERON:0004088,2.12e-32,9;UBERON:0002104,2.12e-32,9;UBERON:0001456,2.12e-32,9;UBERON:0003072,2.12e-32,9;UBERON:0004128,2.12e-32,9;UBERON:0003071,2.12e-32,9;UBERON:0001444,1.64e-26,11;UBERON:0000020,2.66e-24,12;UBERON:0001032,2.66e-24,12;UBERON:0004456,2.66e-24,12;UBERON:0000033,1.98e-22,13;UBERON:0005085,1.98e-22,13;UBERON:0000998,2.52e-09,1;UBERON:0007194,2.52e-09,1;UBERON:0006868,2.52e-09,1;UBERON:0007811,5.39e-08,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,123.318927549474,0,0,0,2.10986744970001,38.8488410154082,95.5728353324979,153.951933451634,295.697952754695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0,0,0,0,0,0,0,0,0.605050573870028,0.889512175379481,1.14135375667535,0,0.164698954724011,2.5133520880027,0.596869416123452,2.53453313254856,0,0,0,0,0,0,0,0,0,0,0.885660887877613,1.255989822731,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,123.318927549474,0,0,0,2.10986744970001,38.8488410154082,95.5728353324979,153.951933451634,295.697952754695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0,0,0,0,0,0,0,0,0.605050573870028,0.889512175379481,1.14135375667535,0,0.164698954724011,2.5133520880027,0.596869416123452,2.53453313254856,0,0,0,0,0,0,0,0,0,0,0.885660887877613,1.255989822731,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p1@Nr2e3 | |||
}} | }} |
Latest revision as of 22:48, 26 September 2015
Short description: | p1@Nr2e3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nr2e3_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 0bp_to_ENSMUST00000034831, ENSMUST00000128108, ENSMUST00000138888, ENSMUST00000156845, NM_013708, uc009pyu.1, uc009pyv.1_5end |
EntrezGene: | Nr2e3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.12e-32 | 9 |
camera-type eye | 2.12e-32 | 9 |
simple eye | 2.12e-32 | 9 |
immature eye | 2.12e-32 | 9 |
ocular region | 2.12e-32 | 9 |
visual system | 2.12e-32 | 9 |
face | 2.12e-32 | 9 |
optic cup | 2.12e-32 | 9 |
optic vesicle | 2.12e-32 | 9 |
eye primordium | 2.12e-32 | 9 |
subdivision of head | 1.64e-26 | 11 |
sense organ | 2.66e-24 | 12 |
sensory system | 2.66e-24 | 12 |
entire sense organ system | 2.66e-24 | 12 |
head | 1.98e-22 | 13 |
ectodermal placode | 1.98e-22 | 13 |
seminal vesicle | 2.52e-09 | 1 |
vesicular gland | 2.52e-09 | 1 |
seminal fluid secreting gland | 2.52e-09 | 1 |
craniocervical region | 5.39e-08 | 36 |