FFCP PHASE1:Mm9::chr6:149258304..149258346,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:149258304..149258346,+ to FFCP PHASE1:Mm9::chr6:149258304..149258346,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67246 | |EntrezGene=67246 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2248 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=209bp_to_ENSMUST00000137983_5end | |||
|cluster_id=chr6:149258304..149258346,+ | |||
|description=CAGE_peak_3_at_2810474O19Rik_5end | |||
|id=chr6:149258304..149258346,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.10e-07!32;CL:0002032!1.10e-07!32;CL:0000037!1.10e-07!32;CL:0000566!1.10e-07!32;CL:0000837!1.10e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.76e-08,32;CL:0002032,1.76e-08,32;CL:0000037,1.76e-08,32;CL:0000837,1.76e-08,32;CL:0002031,4.59e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.98e-13!48;UBERON:0002390!4.99e-12!45;UBERON:0003061!4.99e-12!45;UBERON:0003081!4.96e-11!88;UBERON:0004177!3.02e-09!29;UBERON:0002405!3.81e-09!70;UBERON:0000926!4.90e-08!193;UBERON:0004120!4.90e-08!193;UBERON:0006603!4.90e-08!193;UBERON:0003408!2.13e-07!24;UBERON:0002204!6.06e-07!32;UBERON:0002370!6.21e-07!23;UBERON:0000974!6.21e-07!23;UBERON:0004807!6.21e-07!23;UBERON:0005058!6.21e-07!23;UBERON:0003351!6.21e-07!23;UBERON:0009113!6.21e-07!23;UBERON:0003295!6.21e-07!23;UBERON:0009722!6.21e-07!23;UBERON:0005562!6.21e-07!23;UBERON:0007690!6.21e-07!23;UBERON:0006562!7.08e-07!24;UBERON:0001557!7.08e-07!24;UBERON:0001042!7.08e-07!24;UBERON:0008814!7.08e-07!24;UBERON:0009145!7.08e-07!24;UBERON:0001004!8.72e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.99e-13,48;UBERON:0002405,1.99e-13,48;UBERON:0002390,1.54e-12,45;UBERON:0003061,1.54e-12,45;UBERON:0000926,4.67e-11,120;UBERON:0004120,4.67e-11,120;UBERON:0006603,4.67e-11,120;UBERON:0000077,6.68e-11,35;UBERON:0003081,5.43e-10,87;UBERON:0004177,8.66e-10,29;UBERON:0005057,8.66e-10,29;UBERON:0003408,7.39e-08,24;UBERON:0001004,2.01e-07,42;UBERON:0002370,2.27e-07,23;UBERON:0000974,2.27e-07,23;UBERON:0004807,2.27e-07,23;UBERON:0005058,2.27e-07,23;UBERON:0003351,2.27e-07,23;UBERON:0009113,2.27e-07,23;UBERON:0003295,2.27e-07,23;UBERON:0009722,2.27e-07,23;UBERON:0005562,2.27e-07,23;UBERON:0007690,2.27e-07,23;UBERON:0006562,2.63e-07,24;UBERON:0001557,2.63e-07,24;UBERON:0001042,2.63e-07,24;UBERON:0008814,2.63e-07,24;UBERON:0009145,2.63e-07,24;UBERON:0002204,4.63e-07,32;UBERON:0000065,5.33e-07,41 | |||
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| ||
|short_description=p3@2810474O19Rik | |||
}} | }} |
Latest revision as of 23:02, 26 September 2015
Short description: | p3@2810474O19Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_2810474O19Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2248 |
Association with transcript: | 209bp_to_ENSMUST00000137983_5end |
EntrezGene: | 2810474O19Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.76e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.76e-08 | 32 |
hematopoietic stem cell | 1.76e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.76e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 4.59e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.99e-13 | 48 |
immune system | 1.99e-13 | 48 |
hematopoietic system | 1.54e-12 | 45 |
blood island | 1.54e-12 | 45 |
mesoderm | 4.67e-11 | 120 |
mesoderm-derived structure | 4.67e-11 | 120 |
presumptive mesoderm | 4.67e-11 | 120 |
mixed endoderm/mesoderm-derived structure | 6.68e-11 | 35 |
lateral plate mesoderm | 5.43e-10 | 87 |
hemopoietic organ | 8.66e-10 | 29 |
immune organ | 8.66e-10 | 29 |
gland of gut | 7.39e-08 | 24 |
respiratory system | 2.01e-07 | 42 |
thymus | 2.27e-07 | 23 |
neck | 2.27e-07 | 23 |
respiratory system epithelium | 2.27e-07 | 23 |
hemolymphoid system gland | 2.27e-07 | 23 |
pharyngeal epithelium | 2.27e-07 | 23 |
thymic region | 2.27e-07 | 23 |
pharyngeal gland | 2.27e-07 | 23 |
entire pharyngeal arch endoderm | 2.27e-07 | 23 |
thymus primordium | 2.27e-07 | 23 |
early pharyngeal endoderm | 2.27e-07 | 23 |
pharynx | 2.63e-07 | 24 |
upper respiratory tract | 2.63e-07 | 24 |
chordate pharynx | 2.63e-07 | 24 |
pharyngeal arch system | 2.63e-07 | 24 |
pharyngeal region of foregut | 2.63e-07 | 24 |
musculoskeletal system | 4.63e-07 | 32 |
respiratory tract | 5.33e-07 | 41 |