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FFCP PHASE1:Mm9::chr7:56501501..56501572,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=78286
|EntrezGene=78286
|HGNC=
|HGNC=
|MCL_coexpression_id=3632
|MCL_coexpression_id=3632
|TSSclassifier=NA
|UniProt=F6Q9M5,E9Q842,D3YWD2,Q6ZPE7,Q8BYE8,Q8BYJ2
|UniProt=F6Q9M5,E9Q842,D3YWD2,Q6ZPE7,Q8BYE8,Q8BYJ2
|association_with_transcript=0bp_to_ENSMUST00000050869,ENSMUST00000064395,ENSMUST00000107610,NM_175272,uc009hbg.2,uc009hbh.2,uc009hbm.2_5end
|association_with_transcript=0bp_to_ENSMUST00000050869,ENSMUST00000064395,ENSMUST00000107610,NM_175272,uc009hbg.2,uc009hbh.2,uc009hbm.2_5end
|cluster_id=chr7:56501501..56501572,+
|description=CAGE_peak_1_at_Nav2_5end
|description=CAGE_peak_1_at_Nav2_5end
|id=chr7:56501501..56501572,+
|id=chr7:56501501..56501572,+
|ontology_enrichment_celltype=CL:0002319!3.98e-08!43;CL:0000221!6.92e-08!44;CL:0000133!6.92e-08!44;CL:0000055!9.32e-08!50
|ontology_enrichment_celltype=CL:0002319!3.98e-08!43;CL:0000221!6.92e-08!44;CL:0000133!6.92e-08!44;CL:0000055!9.32e-08!50
|ontology_enrichment_celltype_v019_2=CL:0002319,3.91e-08,43;CL:0000221,6.81e-08,44;CL:0000133,6.81e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.25e-15!75;UBERON:0001016!8.25e-15!75;UBERON:0001017!1.25e-13!73;UBERON:0005743!1.25e-13!73;UBERON:0004121!3.50e-12!102;UBERON:0000924!3.50e-12!102;UBERON:0006601!3.50e-12!102;UBERON:0000956!1.41e-09!21;UBERON:0001869!1.41e-09!21;UBERON:0000203!1.41e-09!21;UBERON:0002020!2.35e-09!34;UBERON:0001049!3.22e-09!52;UBERON:0005068!3.22e-09!52;UBERON:0006241!3.22e-09!52;UBERON:0007135!3.22e-09!52;UBERON:0000468!6.73e-09!333;UBERON:0000025!1.59e-08!114;UBERON:0000955!1.66e-08!50;UBERON:0006238!1.66e-08!50;UBERON:0002791!2.75e-08!29;UBERON:0003528!2.75e-08!29;UBERON:0001893!2.75e-08!29;UBERON:0002619!4.96e-08!17;UBERON:0002616!5.11e-08!49;UBERON:0004111!1.24e-07!122;UBERON:0004535!4.62e-07!23;UBERON:0001009!4.62e-07!23;UBERON:0000922!9.65e-07!328
|ontology_enrichment_uberon=UBERON:0000073!8.25e-15!75;UBERON:0001016!8.25e-15!75;UBERON:0001017!1.25e-13!73;UBERON:0005743!1.25e-13!73;UBERON:0004121!3.50e-12!102;UBERON:0000924!3.50e-12!102;UBERON:0006601!3.50e-12!102;UBERON:0000956!1.41e-09!21;UBERON:0001869!1.41e-09!21;UBERON:0000203!1.41e-09!21;UBERON:0002020!2.35e-09!34;UBERON:0001049!3.22e-09!52;UBERON:0005068!3.22e-09!52;UBERON:0006241!3.22e-09!52;UBERON:0007135!3.22e-09!52;UBERON:0000468!6.73e-09!333;UBERON:0000025!1.59e-08!114;UBERON:0000955!1.66e-08!50;UBERON:0006238!1.66e-08!50;UBERON:0002791!2.75e-08!29;UBERON:0003528!2.75e-08!29;UBERON:0001893!2.75e-08!29;UBERON:0002619!4.96e-08!17;UBERON:0002616!5.11e-08!49;UBERON:0004111!1.24e-07!122;UBERON:0004535!4.62e-07!23;UBERON:0001009!4.62e-07!23;UBERON:0000922!9.65e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.97e-15,75;UBERON:0004121,1.55e-14,95;UBERON:0000924,1.55e-14,95;UBERON:0006601,1.55e-14,95;UBERON:0001017,1.21e-13,73;UBERON:0010314,6.65e-10,92;UBERON:0000956,1.38e-09,21;UBERON:0001869,1.38e-09,21;UBERON:0000203,1.38e-09,21;UBERON:0002020,2.30e-09,34;UBERON:0001049,3.16e-09,52;UBERON:0005068,3.16e-09,52;UBERON:0006241,3.16e-09,52;UBERON:0007135,3.16e-09,52;UBERON:0000073,4.02e-09,54;UBERON:0010371,4.08e-09,73;UBERON:0000025,1.17e-08,114;UBERON:0000955,2.37e-08,47;UBERON:0006238,2.37e-08,47;UBERON:0002346,2.58e-08,64;UBERON:0003075,2.58e-08,64;UBERON:0007284,2.58e-08,64;UBERON:0003528,2.70e-08,29;UBERON:0002791,2.70e-08,29;UBERON:0001893,2.70e-08,29;UBERON:0002619,4.87e-08,17;UBERON:0002616,7.36e-08,46;UBERON:0004111,9.38e-08,122;UBERON:0004535,4.56e-07,23;UBERON:0001009,4.56e-07,23
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12857,20.7947315799147,21.6263840628196,26.2880214566489,30.2074172837964,27.3682888951105,15.9445519745164,9.21696020025169,2.8441000856536,6.08175645870493,3.80030541509861,1.03936658382236,3.75956060901711,4.17230845040656,2.76449533895928,2.65841148914239,3.43285929823702,2.28620419965,1.61321896218945,2.0466154955348,2.02044867444692,1.28564592399726,6.57518112484113,0,0.269141569828427,1.00730769818447,21.8304241256375,18.9559300205694,44.6889963212127,8.7891035422417,9.5298699766719,75.1119950680698,61.6835816919617,76.7679988008791,79.0524638780963,50.0110239432569,52.877572817279,47.9265975164582,50.4359747611127,46.2205257163889,54.8825930456929,0.830298780673413,7.18244772121856,5.9756762013947,17.7467903459855,7.54607385460736,13.236732608401,21.7801793245583,23.6940315824728,24.389859928978,22.7427490587418,25.347929989024,25.4645560871203,20.3202071209645,23.5612560849919,23.2039294580678,21.9095097990214,19.1209137809012,19.0980128259068,18.5438655361488,22.963031540966,20.9150243955103,23.0718548007139,22.6514380449955,23.2554266611726,19.7629698872194,22.4228710912943,28.170907822407,23.6762740294059,23.4941116953341,16.8342681497322,23.845638642959,23.4440668053841,15.9600106836179,20.7615367189194,19.4835677090953,29.4776481966776,24.5628188867679,24.0655580534094,13.390183244819,19.6326363016369,11.5933917810211
|phase1_expression=3.52327463630547,0.348975407639361,0.909998478779072,0,0,6.88305014838748,5.37309073369709,2.06597317506522,0,0.468129052643987,0,0.0797721589953364,0.171200729931206,0.0874204024189974,1.99865857089398,2.22722794128809,0,0.157731082679119,0.822686601634433,0.42438965179803,20.3253463461057,1.29078236561151,0.522399578277871,0.47997726838022,0.68822784320151,1.14846392823004,0.430761996159075,1.07735616342945,0,0,0.221730510655305,0,0.61506478758457,0,3.75507105676657,2.32728503501889,1.83752420636132,0.837063261473815,1.5626706890476,4.18818995179039,2.94115744015507,4.78131839470912,2.42755176515577,28.578577680456,26.3580021170738,42.9499400058335,13.3006528539167,61.047043786525,57.9971522419006,56.3846707315422,26.5974201088189,34.5006154475932,0.167782606057736,6.5282592781021,0,5.14518872071894,7.73640287834643,14.4388185837684,8.49729135610311,11.1088105647127,14.5781222806421,15.9256930072492,12.450127145556,36.8958884085374,39.554654502679,39.0764063220355,53.9280198933129,42.6482318906926,35.4618474094994,35.6415677195663,35.3345935070322,25.7085885963423,20.7616428494517,18.4961106814581,12.172374819316,25.7381260250806,23.1243350098716,18.5146640223522,16.4358990584181,13.3205150607496,10.4295913706747,11.4600941522487,11.4465029590566,14.069065250792,18.3357897332172,43.3104020646292,30.7522830526062,21.4359362699096,105.789492086458,99.9811740212772,18.5513272769074,2.58127163094416,1.3599426674155,0,0,0,4.91555470461132,10.0553890321054,8.57293815189467,10.6001872353102,9.01397886570755,51.3305909657271,45.8649431471962,113.770672504533,6.71122227134764,5.32055717497707,7.07734223020697,3.9964357901671,11.3932668804756,6.08612770165782,5.37804512975021,3.04465478312141,5.07354093963329,3.01445281105245,8.11362079236363,7.03732911446183,13.1013332899218,76.3484604537134,3.5384422077995,14.0737159454246,8.61281921995535,8.727754556434,5.59175283654366,69.0962680947251,92.5754444115471,6.13096932500619,0.239630249011841,0,0.127070227073065,34.7514283419189,33.8550446085784,17.8429180000267,57.7096743038358,68.0203116498679,34.7006034414465,44.4541060805656,9.06370338267815,16.5461270911424,6.06534620240819,12.2056276414155,1.30120442962704,6.43725892413724,9.18316862007281,9.64510834148576,20.2068402479444,21.5231050078548,20.7080811277001,16.557015727297,0.215567992932842,4.72765200419548,7.38994721488585,4.82230611340665,10.8438427197983,14.9748431604532,12.1411460480687,9.95171334092466,0,0.257347907114715,0.852490498186778,18.4341937556597,20.4037672183554,23.0479438670099,35.5117103377815,39.1560821177334,34.8643675125475,40.9259742760718,48.0209388505318,68.5412559695285,72.5708938118449,69.9353396976946,81.3930847840391,90.643992203706,55.1070789380537,49.9247877788583,46.263788684108,44.5576971602302,1.32167513193519,5.28901133327089,6.82522401712749,15.7920936865098,23.453877960621,21.5801371346977,22.9049385160216,19.5932394895936,10.9141684155238,8.39964669092456,17.8447998248191,16.9113001234978,18.5215882763164,11.6846523125049,7.78096979548899,9.16049856970089,6.82804443431094,9.82537208443668,19.1603150644237,9.36796108088446,10.4734343070518,12.2036326609154,12.0149420536089,5.31396532726568,7.06494275286187,7.65062416315163,0,1.66845105716094,2.16214894624523,2.02375901146368,2.02860121388503,1.92941727801933,3.05551022137704,6.04161888646702,3.08056930872567,1.92192989231657,1.43768206527355,2.60498663367952,3.43241440426017,1.76805214562978,2.15276896226295,1.4473305640901,23.6484083413254,3.7898282354097,14.1779529504563,18.6719594352707,36.1422982364293,78.5604347402116,80.6967942603587,66.5405739195094,30.1083125242825,29.8977331025846,27.1073106717728,26.0542670398023,27.6295970985433,34.8604231181443,18.0949540727127,11.4220193601929,5.4094070032094,10.7615331058846,24.2431390881566,28.3652281553132,18.0328439914343,5.30188947129183,12.304820557234,11.3227235846025,38.9916349896366,126.4144941169,155.290675835429,196.738188898239,56.6734982344852,65.7575680300452,74.7093900318929,80.6516504218736,43.4336660737302,8.54714897602825,8.95878276444668,24.7455184458803,6.63725691699814,6.31229654002952,4.53485335447127,7.16699303072413,6.496641643377,10.4527950300935,10.5955600198971,13.0872142611902,14.6163925137736,25.2829406348653,11.5960469432499,5.15677716240934,15.6602218646742,1.98067203434441,1.16422815404479,2.14337035031592,4.25616560741457,8.02659679209317,8.72109809191241,11.8741330154694,14.54964589995,1.90648863777438,5.29268155331909,51.2796246648003,25.1884505645613,34.0164896594799,66.0129062337345,105.214316736584,15.7399651780119,28.370071207608,5.80960994712699,14.4470807574256,9.25972636848558,5.83942216714542,5.19438065339896,4.11800711771741,0.849892149969277,1.11961161858926,1.10559979043539,5.72802370809068,3.00519193902079,20.128627245558,19.9809880520332,20.2815647134035,21.6178938108716,35.334458752823,28.1848284023396,14.9200886930897,10.2395828900516,11.1841076355647,3.94585057078933,16.8953697029696,14.8912641411388,23.3341426012857,20.7947315799147,21.6263840628196,26.2880214566489,30.2074172837964,27.3682888951105,15.9445519745164,9.21696020025169,2.8441000856536,6.08175645870493,3.80030541509861,1.03936658382236,3.75956060901711,4.17230845040656,2.76449533895928,2.65841148914239,3.43285929823702,2.28620419965,1.61321896218945,2.0466154955348,2.02044867444692,1.28564592399726,6.57518112484113,0,0.269141569828427,1.00730769818447,21.8304241256375,18.9559300205694,44.6889963212127,8.7891035422417,9.5298699766719,75.1119950680698,61.6835816919617,76.7679988008791,79.0524638780963,50.0110239432569,52.877572817279,47.9265975164582,50.4359747611127,46.2205257163889,54.8825930456929,0.830298780673413,7.18244772121856,5.9756762013947,17.7467903459855,7.54607385460736,13.236732608401,21.7801793245583,23.6940315824728,24.389859928978,22.7427490587418,25.347929989024,25.4645560871203,20.3202071209645,23.5612560849919,23.2039294580678,21.9095097990214,19.1209137809012,19.0980128259068,18.5438655361488,22.963031540966,20.9150243955103,23.0718548007139,22.6514380449955,23.2554266611726,19.7629698872194,22.4228710912943,28.170907822407,23.6762740294059,23.4941116953341,16.8342681497322,23.845638642959,23.4440668053841,15.9600106836179,20.7615367189194,19.4835677090953,29.4776481966776,24.5628188867679,24.0655580534094,13.390183244819,19.6326363016369,11.5933917810211
|short_description=p1@Nav2
|short_description=p1@Nav2
}}
}}

Latest revision as of 23:04, 26 September 2015

Short description:p1@Nav2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nav2_5end
Coexpression cluster:MCL_coexpression_mm9:3632
Association with transcript: 0bp_to_ENSMUST00000050869, ENSMUST00000064395, ENSMUST00000107610, NM_175272, uc009hbg.2, uc009hbh.2, uc009hbm.2_5end
EntrezGene:Nav2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nav2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D828.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D926.36
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B342.95
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C261.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B858.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C356.38
Mouse Astrocytes, donor2.CNhs12078.11552-120C426.60
Mouse Astrocytes, donor3.CNhs12107.11633-122C434.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.44
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.93
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C736.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E739.55
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D239.08
Mouse Microglia, donor1.CNhs12629.11718-123C853.93
Mouse Microglia, donor2.CNhs12634.11736-123E842.65
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D535.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F535.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D935.33
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.76
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.17
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.43
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D643.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.75
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.44
Mouse Schwann, donor1.CNhs12507.11728-123D9105.79
Mouse Schwann, donor2.CNhs12573.11746-123F999.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.55
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.60
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.01
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H151.33
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I845.86
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6113.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D76.09
adrenal gland, embryo E14.CNhs11038.406-44C55.38
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C18.11
adrenal gland, neonate N25.CNhs11223.1377-27I37.04
amnion, adult pregnant day17.5.CNhs10488.583-22A813.10
aorta, adult.CNhs10498.46-23H176.35
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F514.07
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B269.10
cerebellum, neonate N30.CNhs11135.1395-42I292.58
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A434.75
corpus striatum, adult.CNhs10487.19-21D833.86
corpus striatum, neonate N00.CNhs11226.630-43F117.84
cortex, adult.CNhs10473.12-14D557.71
cortex, neonate N30.CNhs11107.1392-42F268.02
diencephalon, adult.CNhs10482.20-12F234.70
diencephalon, neonate N30.CNhs11201.1388-42B244.45
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.55
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G412.21
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C99.18
eyeball, embryo E17.CNhs11023.1261-18D49.65
eyeball, neonate N00.CNhs11207.633-15C620.21
eyeball, neonate N01.CNhs11140.1532-43E721.52
eyeball, neonate N02.CNhs11205.1551-44G820.71
eyeball, neonate N16.CNhs11188.777-19A216.56
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E710.84
forelimb, embryo E17.CNhs10598.1517-43C414.97
forelimb, embryo E18.CNhs11008.1520-43B512.14
gonad, embryo E13.CNhs11044.1564-45I69.95
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E918.43
heart, embryo E12.CNhs11015.353-12F520.40
heart, embryo E13.CNhs11013.376-3I923.05
heart, embryo E14.CNhs10597.403-26D435.51
heart, embryo E15.CNhs11017.431-16C839.16
heart, embryo E16.CNhs11021.457-17C634.86
heart, embryo E17.CNhs11025.479-18E540.93
heart, embryo E18.CNhs11030.1283-20G348.02
heart, neonate N00.CNhs11213.639-21E368.54
heart, neonate N03.CNhs11221.1349-25I272.57
heart, neonate N10.CNhs11118.749-24G169.94
heart, neonate N16.CNhs11209.782-15G181.39
heart, neonate N20.CNhs11127.821-26I690.64
heart, neonate N25.CNhs11196.1351-25D355.11
heart, neonate N30.CNhs11202.1390-42D249.92
hippocampus, adult.CNhs10478.13-16E846.26
hippocampus, neonate N00.CNhs11228.627-43G144.56
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D515.79
intestine, embryo E15.CNhs10602.976-16D823.45
intestine, embryo E16.CNhs10585.463-22H421.58
intestine, embryo E17.CNhs10582.482-18D322.90
intestine, embryo E18.CNhs10526.1289-20F719.59
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B817.84
intestine, neonate N07.CNhs11095.720-20F216.91
intestine, neonate N10.CNhs11098.755-23A518.52
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E37.78
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F89.83
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I29.37
kidney, embryo E18.CNhs11001.1288-20C710.47
kidney, neonate N00.CNhs11214.646-21G712.20
kidney, neonate N10.CNhs11206.758-6D512.01
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F37.06
kidney, neonate N30.CNhs11203.1385-42H17.65
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B123.65
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F814.18
lung, embryo E15.CNhs11020.432-17C518.67
lung, embryo E16.CNhs10998.458-17B636.14
lung, embryo E17.CNhs10605.480-44A678.56
lung, embryo E18.CNhs10583.1287-20I680.70
lung, neonate N00.CNhs11224.640-42C666.54
lung, neonate N06.CNhs11212.683-20E530.11
lung, neonate N07.CNhs11111.715-19A329.90
lung, neonate N10.CNhs11219.750-23E627.11
lung, neonate N20.CNhs11109.822-18A426.05
lung, neonate N25.CNhs11119.1359-25C727.63
lung, neonate N30.CNhs11133.1394-42H234.86
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H210.76
medulla oblongata, adult.CNhs10477.17-12C224.24
medulla oblongata, neonate N30.CNhs11200.1396-42A328.37
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.03
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.32
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E338.99
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7126.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8155.29
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9196.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D456.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D565.76
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D674.71
olfactory brain, adult.CNhs10489.18-22I980.65
ovary, adult.CNhs10507.91-2I743.43
ovary, embryo E18.CNhs11040.505-44H78.55
ovary, neonate N00.CNhs11217.1299-22I48.96
oviduct, adult pregnant day01.CNhs10500.988-6G624.75
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E57.17
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G910.60
pancreas, neonate N01.CNhs11138.1531-43D713.09
pancreas, neonate N02.CNhs11139.1539-43D814.62
pancreas, neonate N16.CNhs11136.787-43B625.28
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G815.66
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F58.72
pituitary gland, neonate N00.CNhs11190.1308-22E911.87
placenta, adult pregnant day10.CNhs10472.539-13I714.55
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C351.28
skin, neonate N00.CNhs11124.650-25G425.19
skin, neonate N03.CNhs11215.662-22H334.02
skin, neonate N06.CNhs11097.693-20I566.01
skin, neonate N10.CNhs11108.762-6C4105.21
small intestine, neonate N16.CNhs11114.790-21I115.74
spinal cord, adult.CNhs10505.24-13C928.37
spleen, adult.CNhs10465.25-2G25.81
spleen, embryo E16.CNhs11035.461-43C114.45
spleen, embryo E18.CNhs11011.1271-21F29.26
spleen, neonate N10.CNhs11116.752-24D15.84
spleen, neonate N20.CNhs11112.824-19H15.19
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G820.13
stomach, embryo E16.CNhs11022.459-17D419.98
stomach, embryo E17.CNhs11006.1035-18D520.28
stomach, embryo E18.CNhs10999.1286-20C621.62
stomach, neonate N03.CNhs11193.1340-24B835.33
stomach, neonate N07.CNhs11210.718-18A928.18
stomach, neonate N25.CNhs11104.1355-25E414.92
stomach, neonate N30.CNhs11134.1386-42I110.24
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F516.90
testis, embryo E15.CNhs11034.443-27C514.89
testis, embryo E16.CNhs11033.470-26G523.33
testis, embryo E17.CNhs11029.486-18I520.79
testis, embryo E18.CNhs11027.503-18G521.63
testis, neonate N00.CNhs11189.1300-22B726.29
testis, neonate N07.CNhs11222.726-26I430.21
testis, neonate N10.CNhs11204.763-44D927.37
testis, neonate N20.CNhs11110.839-18H315.94
testis, neonate N30.CNhs11130.1391-42E29.22
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I23.80
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C43.43
thymus, neonate N07.CNhs11211.713-19D32.29
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E421.83
uterus, adult pregnant day19.CNhs10497.590-15F518.96
uterus, adult.CNhs10509.92-27E544.69
vagina, adult.CNhs10502.89-27D58.79
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A175.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A261.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A376.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D779.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A450.01
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A552.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A750.44
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A846.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A954.88
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H25.98
whole body, embryo E14.5.CNhs10578.420-27D217.75
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F213.24
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G521.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.69
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.39
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.74
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G525.46
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.32
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G523.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G523.20
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.07
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.65
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.26
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G523.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G523.44
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.76
whole body, embryo E17.5.CNhs10513.490-9F919.48
whole body, embryo E17.CNhs10517.475-3I529.48
whole body, embryo E18.CNhs10516.493-3B324.56
whole body, neonate N00.CNhs10525.657-19C224.07
whole body, neonate N01.CNhs10576.659-23C613.39
whole body, neonate N06.CNhs10515.692-21D119.63
whole body, neonate N10.CNhs10518.761-6B411.59





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell3.91e-0843
ectodermal cell6.81e-0844
neurectodermal cell6.81e-0844

Uber anatomy
Ontology termp-valuen
nervous system7.97e-1575
ectoderm-derived structure1.55e-1495
ectoderm1.55e-1495
presumptive ectoderm1.55e-1495
central nervous system1.21e-1373
structure with developmental contribution from neural crest6.65e-1092
cerebral cortex1.38e-0921
cerebral hemisphere1.38e-0921
pallium1.38e-0921
gray matter2.30e-0934
neural tube3.16e-0952
neural rod3.16e-0952
future spinal cord3.16e-0952
neural keel3.16e-0952
regional part of nervous system4.02e-0954
ecto-epithelium4.08e-0973
tube1.17e-08114
brain2.37e-0847
future brain2.37e-0847
neurectoderm2.58e-0864
neural plate2.58e-0864
presumptive neural plate2.58e-0864
brain grey matter2.70e-0829
regional part of telencephalon2.70e-0829
telencephalon2.70e-0829
regional part of cerebral cortex4.87e-0817
regional part of brain7.36e-0846
anatomical conduit9.38e-08122
cardiovascular system4.56e-0723
circulatory system4.56e-0723
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