FFCP PHASE1:Mm9::chr1:187278654..187278679,+: Difference between revisions
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|id=chr1:187278654..187278679,+
|short_description=p4@Slc30a10
|description=CAGE_peak_4_at_Slc30a10_5end
|association_with_transcript=-47bp_to_ENSMUST00000061093,NM...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=226781 | |EntrezGene=226781 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=164 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UVU3 | |UniProt=Q3UVU3 | ||
|association_with_transcript=-47bp_to_ENSMUST00000061093,NM_001033286,uc007dzk.1,uc007dzl.1_5end | |||
|cluster_id=chr1:187278654..187278679,+ | |||
|description=CAGE_peak_4_at_Slc30a10_5end | |||
|id=chr1:187278654..187278679,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.21e-12!23;CL:0000337!9.21e-12!23;CL:0000540!2.34e-07!33;CL:0000047!2.34e-07!33;CL:0000031!2.34e-07!33;CL:0000404!2.34e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.36e-12,23;CL:0000337,5.36e-12,23;CL:0000540,4.67e-08,33;CL:0000047,4.67e-08,33;CL:0000031,4.67e-08,33;CL:0000404,4.67e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.19e-13!49;UBERON:0002020!1.29e-12!34;UBERON:0001049!1.53e-12!52;UBERON:0005068!1.53e-12!52;UBERON:0006241!1.53e-12!52;UBERON:0007135!1.53e-12!52;UBERON:0002346!1.53e-12!71;UBERON:0003075!1.53e-12!71;UBERON:0007284!1.53e-12!71;UBERON:0000033!1.79e-12!63;UBERON:0000955!3.99e-11!50;UBERON:0006238!3.99e-11!50;UBERON:0001017!6.87e-11!73;UBERON:0005743!6.87e-11!73;UBERON:0002616!8.40e-11!49;UBERON:0003080!9.48e-11!40;UBERON:0002780!3.60e-10!39;UBERON:0001890!3.60e-10!39;UBERON:0006240!3.60e-10!39;UBERON:0000073!4.50e-10!75;UBERON:0001016!4.50e-10!75;UBERON:0002791!8.40e-10!29;UBERON:0003528!8.40e-10!29;UBERON:0001893!8.40e-10!29;UBERON:0004121!8.07e-08!102;UBERON:0000924!8.07e-08!102;UBERON:0006601!8.07e-08!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.49e-13,34;UBERON:0000073,2.79e-11,54;UBERON:0002346,3.72e-10,64;UBERON:0003075,3.72e-10,64;UBERON:0007284,3.72e-10,64;UBERON:0001049,3.96e-10,52;UBERON:0005068,3.96e-10,52;UBERON:0006241,3.96e-10,52;UBERON:0007135,3.96e-10,52;UBERON:0003056,7.50e-09,49;UBERON:0003528,9.06e-09,29;UBERON:0002791,9.06e-09,29;UBERON:0001893,9.06e-09,29;UBERON:0010371,9.88e-09,73;UBERON:0001017,1.45e-08,73;UBERON:0001016,4.05e-08,75;UBERON:0003080,5.42e-08,40;UBERON:0002780,2.88e-07,39;UBERON:0001890,2.88e-07,39;UBERON:0006240,2.88e-07,39;UBERON:0002616,4.15e-07,46;UBERON:0004121,4.57e-07,95;UBERON:0000924,4.57e-07,95;UBERON:0006601,4.57e-07,95;UBERON:0000955,7.68e-07,47;UBERON:0006238,7.68e-07,47 | |||
|phase1_expression=1.92178616525753,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,1.72269589234506,0,0.646413698057667,0.570070258369122,0,0,1.27006134691926,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.61853168687678,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0,0.384218305321555,3.62913643079672,1.75507719831198,3.15487442027073,2.85650984403804,1.32521124570968,1.10241719293459,0.670918297127655,0.919218786610021,1.10115880999389,1.40456071893706,0.921639199537461,2.2420668914133,2.65314166446988,0.52091337055676,0.837548997004143,2.25105044012672,1.5279824777681,2.65165726926301,1.99320353118744,1.4911955666024,0,0,0,0,0,1.07940638327563,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0.883366073841574,2.42437626567611,0,0,0,0.255457055208591,0,0,0,2.09706895166752,4.57500602818627,4.64921102817598,1.04294592115366,0.767146371990992,1.66230435647648,3.0825839982874,0,0,0,0.210441855886474,0.130120442962704,0.919608417733892,1.26043490863744,1.35634336052144,1.56483948048054,0.768682321709099,2.06143794031403,0.258703370739016,0.215567992932842,0.567318240503458,0.175951124163949,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0.828503090142008,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,4.21908910755066,3.96502539580558,0,0.639864751605702,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.949058123089023,0.494096864172033,1.50801125280162,0.596869416123452,0.19496408711912,0,0.864552199498777,1.1948476395262,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,7.84171996865642,8.45203678986773,9.44420872016386,9.53442570525964,14.9529839046498,8.40265310878685,5.17853047411459,1.29708181420028,1.09824565275233,1.43768206527355,0.744281895337007,0.936113019343682,0,0.538192240565737,0.482443521363367,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.64096361229084,0,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.646793418913773,0.214337035031592,0.354680467284547,0,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0.874442509889552,0.741701208042039,0.341741761595705,0.206386867963223,1.66675074632741,2.0720530270516,1.0935538217682,0.915112692826091,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0.518459893167171,0,0,0,0.496375471371293,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,1.54667864109319,0.685082519770642,0,1.35004500046361,1.35096360967266,0.453142408984205,1.03552062350364,0.103787347584177,1.99512436700516,1.19513524027894,2.91728060481953,1.88651846365184,0.735374033800057,1.11123363900808,1.23621034343337,0.320919209591815,2.02157769411038,1.77435509923168,0.754505365544305,1.591905626988,1.21647789569252,0.976402972245426,0.952587382566147,1.0429589335037,0.964546102318525,0.824171801606613,1.61918812147837,0.685738504770831,0.887379030796687,0.476872379894642,1.16277133305863,0.752875043322645,1.60767754994185,0.548783918618318,1.8414879800649,2.03706170768793,0,1.66089025373844,1.18205378850676,1.63692417267876,1.23949472948773,1.54325288784913,0.749431733813838,0.701794825336225,0.429742108096597,0.382576664137687,0.661774257358546,0.231867835620421 | |phase1_expression=1.92178616525753,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,1.72269589234506,0,0.646413698057667,0.570070258369122,0,0,1.27006134691926,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.61853168687678,0.528990979272033,1.26766280701236,0.338844532069132,0,0,0,0,0,0.384218305321555,3.62913643079672,1.75507719831198,3.15487442027073,2.85650984403804,1.32521124570968,1.10241719293459,0.670918297127655,0.919218786610021,1.10115880999389,1.40456071893706,0.921639199537461,2.2420668914133,2.65314166446988,0.52091337055676,0.837548997004143,2.25105044012672,1.5279824777681,2.65165726926301,1.99320353118744,1.4911955666024,0,0,0,0,0,1.07940638327563,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0.883366073841574,2.42437626567611,0,0,0,0.255457055208591,0,0,0,2.09706895166752,4.57500602818627,4.64921102817598,1.04294592115366,0.767146371990992,1.66230435647648,3.0825839982874,0,0,0,0.210441855886474,0.130120442962704,0.919608417733892,1.26043490863744,1.35634336052144,1.56483948048054,0.768682321709099,2.06143794031403,0.258703370739016,0.215567992932842,0.567318240503458,0.175951124163949,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0.828503090142008,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,4.21908910755066,3.96502539580558,0,0.639864751605702,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.949058123089023,0.494096864172033,1.50801125280162,0.596869416123452,0.19496408711912,0,0.864552199498777,1.1948476395262,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,7.84171996865642,8.45203678986773,9.44420872016386,9.53442570525964,14.9529839046498,8.40265310878685,5.17853047411459,1.29708181420028,1.09824565275233,1.43768206527355,0.744281895337007,0.936113019343682,0,0.538192240565737,0.482443521363367,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.64096361229084,0,0,0,0,0.430846795465598,0,0,0,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.646793418913773,0.214337035031592,0.354680467284547,0,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0.874442509889552,0.741701208042039,0.341741761595705,0.206386867963223,1.66675074632741,2.0720530270516,1.0935538217682,0.915112692826091,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0.518459893167171,0,0,0,0.496375471371293,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,1.54667864109319,0.685082519770642,0,1.35004500046361,1.35096360967266,0.453142408984205,1.03552062350364,0.103787347584177,1.99512436700516,1.19513524027894,2.91728060481953,1.88651846365184,0.735374033800057,1.11123363900808,1.23621034343337,0.320919209591815,2.02157769411038,1.77435509923168,0.754505365544305,1.591905626988,1.21647789569252,0.976402972245426,0.952587382566147,1.0429589335037,0.964546102318525,0.824171801606613,1.61918812147837,0.685738504770831,0.887379030796687,0.476872379894642,1.16277133305863,0.752875043322645,1.60767754994185,0.548783918618318,1.8414879800649,2.03706170768793,0,1.66089025373844,1.18205378850676,1.63692417267876,1.23949472948773,1.54325288784913,0.749431733813838,0.701794825336225,0.429742108096597,0.382576664137687,0.661774257358546,0.231867835620421 | ||
|short_description=p4@Slc30a10 | |||
}} | }} |
Latest revision as of 23:15, 26 September 2015
Short description: | p4@Slc30a10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc30a10_5end |
Coexpression cluster: | MCL_coexpression_mm9:164 |
Association with transcript: | -47bp_to_ENSMUST00000061093, NM_001033286, uc007dzk.1, uc007dzl.1_5end |
EntrezGene: | Slc30a10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.36e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.36e-12 | 23 |
neuron | 4.67e-08 | 33 |
neuronal stem cell | 4.67e-08 | 33 |
neuroblast | 4.67e-08 | 33 |
electrically signaling cell | 4.67e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
gray matter | 6.49e-13 | 34 |
regional part of nervous system | 2.79e-11 | 54 |
neurectoderm | 3.72e-10 | 64 |
neural plate | 3.72e-10 | 64 |
presumptive neural plate | 3.72e-10 | 64 |
neural tube | 3.96e-10 | 52 |
neural rod | 3.96e-10 | 52 |
future spinal cord | 3.96e-10 | 52 |
neural keel | 3.96e-10 | 52 |
pre-chordal neural plate | 7.50e-09 | 49 |
brain grey matter | 9.06e-09 | 29 |
regional part of telencephalon | 9.06e-09 | 29 |
telencephalon | 9.06e-09 | 29 |
ecto-epithelium | 9.88e-09 | 73 |
central nervous system | 1.45e-08 | 73 |
nervous system | 4.05e-08 | 75 |
anterior neural tube | 5.42e-08 | 40 |
regional part of forebrain | 2.88e-07 | 39 |
forebrain | 2.88e-07 | 39 |
future forebrain | 2.88e-07 | 39 |
regional part of brain | 4.15e-07 | 46 |
ectoderm-derived structure | 4.57e-07 | 95 |
ectoderm | 4.57e-07 | 95 |
presumptive ectoderm | 4.57e-07 | 95 |
brain | 7.68e-07 | 47 |
future brain | 7.68e-07 | 47 |