FFCP PHASE1:Mm9::chr1:20880628..20880641,+: Difference between revisions
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{{FFCP|EntrezGene=74229|HGNC=|MCL_coexpression_id=1|UniProt=Q80ZE5|association_with_transcript=-49bp_to_ENSMUST00000163700_5end|description=CAGE_peak_3_at_Paqr8_5end|id=chr1:20880628..20880641,+|ontology_enrichment_celltype=CL:0000221!5.14e-13!44;CL:0000133!5.14e-13!44;CL:0002319!6.02e-13!43;CL:0000055!2.68e-11!50;CL:0000540!2.11e-10!33;CL:0000047!2.11e-10!33;CL:0000031!2.11e-10!33;CL:0000404!2.11e-10!33;CL:0000393!1.55e-09!39;CL:0000211!1.55e-09!39;CL:0000117!9.57e-08!23;CL:0000337!9.57e-08!23|ontology_enrichment_celltype_v019_2=CL:0002319,1.43e-15,43;CL:0000221,6.35e-15,44;CL:0000133,6.35e-15,44;CL:0000540,4.01e-13,33;CL:0000047,4.01e-13,33;CL:0000031,4.01e-13,33;CL:0000404,4.01e-13,33;CL:0000393,2.24e-11,39;CL:0000211,2.24e-11,39;CL:0000117,9.89e-11,23;CL:0000337,9.89e-11,23;CL:0002321,1.05e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.44e-28!75;UBERON:0001016!4.44e-28!75;UBERON:0001017!5.05e-28!73;UBERON:0005743!5.05e-28!73;UBERON:0004121!4.51e-23!102;UBERON:0000924!4.51e-23!102;UBERON:0006601!4.51e-23!102;UBERON:0001049!9.31e-21!52;UBERON:0005068!9.31e-21!52;UBERON:0006241!9.31e-21!52;UBERON:0007135!9.31e-21!52;UBERON:0000955!9.98e-20!50;UBERON:0006238!9.98e-20!50;UBERON:0002346!1.91e-19!71;UBERON:0003075!1.91e-19!71;UBERON:0007284!1.91e-19!71;UBERON:0002616!3.50e-19!49;UBERON:0000033!1.07e-15!63;UBERON:0003080!5.13e-14!40;UBERON:0002020!1.88e-13!34;UBERON:0002780!2.15e-13!39;UBERON:0001890!2.15e-13!39;UBERON:0006240!2.15e-13!39;UBERON:0003056!8.92e-11!49;UBERON:0002791!9.01e-11!29;UBERON:0003528!9.01e-11!29;UBERON:0001893!9.01e-11!29;UBERON:0000153!5.71e-08!94;UBERON:0003076!1.12e-07!12;UBERON:0003057!1.12e-07!12;UBERON:0000956!1.43e-07!21;UBERON:0001869!1.43e-07!21;UBERON:0000203!1.43e-07!21;UBERON:0007811!1.77e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.55e-34,73;UBERON:0001016,1.59e-33,75;UBERON:0000073,1.12e-26,54;UBERON:0001049,8.62e-25,52;UBERON:0005068,8.62e-25,52;UBERON:0006241,8.62e-25,52;UBERON:0007135,8.62e-25,52;UBERON:0004121,4.96e-23,95;UBERON:0000924,4.96e-23,95;UBERON:0006601,4.96e-23,95;UBERON:0000955,1.31e-20,47;UBERON:0006238,1.31e-20,47;UBERON:0002616,6.90e-20,46;UBERON:0002346,6.68e-19,64;UBERON:0003075,6.68e-19,64;UBERON:0007284,6.68e-19,64;UBERON:0002020,6.78e-17,34;UBERON:0003080,2.98e-16,40;UBERON:0010371,4.12e-16,73;UBERON:0002780,2.04e-15,39;UBERON:0001890,2.04e-15,39;UBERON:0006240,2.04e-15,39;UBERON:0010314,1.06e-14,92;UBERON:0003528,3.46e-13,29;UBERON:0002791,3.46e-13,29;UBERON:0001893,3.46e-13,29;UBERON:0003056,7.56e-12,49;UBERON:0000956,1.86e-09,21;UBERON:0001869,1.86e-09,21;UBERON:0000203,1.86e-09,21;UBERON:0003076,1.94e-09,12;UBERON:0003057,1.94e-09,12;UBERON:0011216,3.04e-08,194;UBERON:0002619,4.58e-08,17;UBERON:0000025,1.11e-07,114;UBERON:0004111,1.67e-07,122;UBERON:0002021,8.92e-07,10;UBERON:0000411,8.92e-07,10;UBERON:0001950,8.92e-07,10|phase1_expression=2.40223270657191,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.387369970324729,0.140788722151667,0,0,0,0.856003649656029,0.34968160967599,0,0.202475267389826,0,0.315462165358238,0.822686601634433,0.42438965179803,1.02051948181284,0.297872853602656,0.261199789138935,0.639969691173627,0.68822784320151,0,0.430761996159075,0,0,0,0.443461021310609,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.202753862439029,0.917733760808408,0.782391344348039,3.70642765846759,1.97717564461025,4.86074747685709,4.4795654920116,10.062679505548,0.671130424230945,0,0.336093799142464,0.257259436035947,1.43266719969378,1.54701627683233,2.02316460859598,2.64495489636016,0,1.35537812827653,0.889294796111139,0,0,0.7104801149461,0.599200221036809,1.53687322128622,1.03689612308478,1.35005938331691,1.47227472945967,4.57041575046086,4.41737081903227,1.34739879136449,0.958454710182364,0,6.60695285996332,6.76742891851495,5.37622866396852,2.37395317914349,2.37867873366265,1.04182674111352,4.74611098302348,6.19038871034848,6.26472815884921,4.41942878210502,3.84403538157578,2.42319279572891,0.605809546665472,1.81371744256285,3.47837386442013,0,0,0.539703191637817,0,0,0.842666520790511,0.681721290312231,0.779358013808606,0.70667914902068,0.985903938436763,2.56652954828636,0,0,1.29894624606728,1.52015919285059,0.505524445014783,0.34255163915718,1.29468941823586,2.67195850316685,0.346970653532272,1.82679286987285,1.84492397804847,1.95939432718409,1.64624189989987,2.89033160058254,0.494389935468748,0.433798070759735,0,0.323533699894818,0.220841518460394,0,1.86391761218122,8.49064311333487,7.54008144528438,0.766371165625774,0.11981512450592,0,0.127070227073065,5.24267237916879,5.03250663100489,0.879580464790051,3.65031072403781,5.11430914660661,5.194701113989,4.2182728397617,0.611036183101898,0.373220911830279,0,0.841767423545896,1.43132487258974,0.689706313300419,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.281105173679186,0.517406741478031,0.646703978798527,1.13463648100692,2.111413489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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74229 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80ZE5 | |||
|association_with_transcript=-49bp_to_ENSMUST00000163700_5end | |||
|cluster_id=chr1:20880628..20880641,+ | |||
|description=CAGE_peak_3_at_Paqr8_5end | |||
|id=chr1:20880628..20880641,+ | |||
|ontology_enrichment_celltype=CL:0000221!5.14e-13!44;CL:0000133!5.14e-13!44;CL:0002319!6.02e-13!43;CL:0000055!2.68e-11!50;CL:0000540!2.11e-10!33;CL:0000047!2.11e-10!33;CL:0000031!2.11e-10!33;CL:0000404!2.11e-10!33;CL:0000393!1.55e-09!39;CL:0000211!1.55e-09!39;CL:0000117!9.57e-08!23;CL:0000337!9.57e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.43e-15,43;CL:0000221,6.35e-15,44;CL:0000133,6.35e-15,44;CL:0000540,4.01e-13,33;CL:0000047,4.01e-13,33;CL:0000031,4.01e-13,33;CL:0000404,4.01e-13,33;CL:0000393,2.24e-11,39;CL:0000211,2.24e-11,39;CL:0000117,9.89e-11,23;CL:0000337,9.89e-11,23;CL:0002321,1.05e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.44e-28!75;UBERON:0001016!4.44e-28!75;UBERON:0001017!5.05e-28!73;UBERON:0005743!5.05e-28!73;UBERON:0004121!4.51e-23!102;UBERON:0000924!4.51e-23!102;UBERON:0006601!4.51e-23!102;UBERON:0001049!9.31e-21!52;UBERON:0005068!9.31e-21!52;UBERON:0006241!9.31e-21!52;UBERON:0007135!9.31e-21!52;UBERON:0000955!9.98e-20!50;UBERON:0006238!9.98e-20!50;UBERON:0002346!1.91e-19!71;UBERON:0003075!1.91e-19!71;UBERON:0007284!1.91e-19!71;UBERON:0002616!3.50e-19!49;UBERON:0000033!1.07e-15!63;UBERON:0003080!5.13e-14!40;UBERON:0002020!1.88e-13!34;UBERON:0002780!2.15e-13!39;UBERON:0001890!2.15e-13!39;UBERON:0006240!2.15e-13!39;UBERON:0003056!8.92e-11!49;UBERON:0002791!9.01e-11!29;UBERON:0003528!9.01e-11!29;UBERON:0001893!9.01e-11!29;UBERON:0000153!5.71e-08!94;UBERON:0003076!1.12e-07!12;UBERON:0003057!1.12e-07!12;UBERON:0000956!1.43e-07!21;UBERON:0001869!1.43e-07!21;UBERON:0000203!1.43e-07!21;UBERON:0007811!1.77e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.55e-34,73;UBERON:0001016,1.59e-33,75;UBERON:0000073,1.12e-26,54;UBERON:0001049,8.62e-25,52;UBERON:0005068,8.62e-25,52;UBERON:0006241,8.62e-25,52;UBERON:0007135,8.62e-25,52;UBERON:0004121,4.96e-23,95;UBERON:0000924,4.96e-23,95;UBERON:0006601,4.96e-23,95;UBERON:0000955,1.31e-20,47;UBERON:0006238,1.31e-20,47;UBERON:0002616,6.90e-20,46;UBERON:0002346,6.68e-19,64;UBERON:0003075,6.68e-19,64;UBERON:0007284,6.68e-19,64;UBERON:0002020,6.78e-17,34;UBERON:0003080,2.98e-16,40;UBERON:0010371,4.12e-16,73;UBERON:0002780,2.04e-15,39;UBERON:0001890,2.04e-15,39;UBERON:0006240,2.04e-15,39;UBERON:0010314,1.06e-14,92;UBERON:0003528,3.46e-13,29;UBERON:0002791,3.46e-13,29;UBERON:0001893,3.46e-13,29;UBERON:0003056,7.56e-12,49;UBERON:0000956,1.86e-09,21;UBERON:0001869,1.86e-09,21;UBERON:0000203,1.86e-09,21;UBERON:0003076,1.94e-09,12;UBERON:0003057,1.94e-09,12;UBERON:0011216,3.04e-08,194;UBERON:0002619,4.58e-08,17;UBERON:0000025,1.11e-07,114;UBERON:0004111,1.67e-07,122;UBERON:0002021,8.92e-07,10;UBERON:0000411,8.92e-07,10;UBERON:0001950,8.92e-07,10 | |||
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| |||
|short_description=p3@Paqr8 | |||
}} |
Latest revision as of 00:59, 27 September 2015
Short description: | p3@Paqr8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Paqr8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -49bp_to_ENSMUST00000163700_5end |
EntrezGene: | Paqr8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.43e-15 | 43 |
ectodermal cell | 6.35e-15 | 44 |
neurectodermal cell | 6.35e-15 | 44 |
neuron | 4.01e-13 | 33 |
neuronal stem cell | 4.01e-13 | 33 |
neuroblast | 4.01e-13 | 33 |
electrically signaling cell | 4.01e-13 | 33 |
electrically responsive cell | 2.24e-11 | 39 |
electrically active cell | 2.24e-11 | 39 |
CNS neuron (sensu Vertebrata) | 9.89e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.89e-11 | 23 |
embryonic cell | 1.05e-08 | 70 |