FFCP PHASE1:Mm9::chr6:29644204..29644250,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232670 | |EntrezGene=232670 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R3S2 | |UniProt=Q8R3S2 | ||
|association_with_transcript=0bp_to_ENSMUST00000046750,ENSMUST00000115250_5end | |association_with_transcript=0bp_to_ENSMUST00000046750,ENSMUST00000115250_5end | ||
|cluster_id=chr6:29644204..29644250,+ | |||
|description=CAGE_peak_1_at_Tspan33_5end | |description=CAGE_peak_1_at_Tspan33_5end | ||
|id=chr6:29644204..29644250,+ | |id=chr6:29644204..29644250,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.65e-13!49;UBERON:0005173!2.65e-13!49;UBERON:0002417!2.65e-13!49;UBERON:0000916!2.65e-13!49;UBERON:0005177!1.18e-10!85;UBERON:0009569!7.31e-10!66;UBERON:0002107!9.22e-10!22;UBERON:0007499!9.22e-10!22;UBERON:0006925!9.22e-10!22;UBERON:0009497!9.22e-10!22;UBERON:0000015!9.22e-10!22;UBERON:0002423!9.22e-10!22;UBERON:0006235!9.22e-10!22;UBERON:0008835!9.22e-10!22;UBERON:0003894!9.22e-10!22;UBERON:0004161!9.22e-10!22;UBERON:0008836!9.22e-10!22;UBERON:0009854!1.81e-09!23;UBERON:0009856!1.81e-09!23;UBERON:0002365!7.02e-09!25;UBERON:0002330!7.02e-09!25 | |ontology_enrichment_uberon=UBERON:0005172!2.65e-13!49;UBERON:0005173!2.65e-13!49;UBERON:0002417!2.65e-13!49;UBERON:0000916!2.65e-13!49;UBERON:0005177!1.18e-10!85;UBERON:0009569!7.31e-10!66;UBERON:0002107!9.22e-10!22;UBERON:0007499!9.22e-10!22;UBERON:0006925!9.22e-10!22;UBERON:0009497!9.22e-10!22;UBERON:0000015!9.22e-10!22;UBERON:0002423!9.22e-10!22;UBERON:0006235!9.22e-10!22;UBERON:0008835!9.22e-10!22;UBERON:0003894!9.22e-10!22;UBERON:0004161!9.22e-10!22;UBERON:0008836!9.22e-10!22;UBERON:0009854!1.81e-09!23;UBERON:0009856!1.81e-09!23;UBERON:0002365!7.02e-09!25;UBERON:0002330!7.02e-09!25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.44e-13,49;UBERON:0005173,1.44e-13,49;UBERON:0002417,1.44e-13,49;UBERON:0000916,1.44e-13,49;UBERON:0009569,5.65e-10,66;UBERON:0002107,7.42e-10,22;UBERON:0007499,7.42e-10,22;UBERON:0006925,7.42e-10,22;UBERON:0009497,7.42e-10,22;UBERON:0000015,7.42e-10,22;UBERON:0002423,7.42e-10,22;UBERON:0006235,7.42e-10,22;UBERON:0008835,7.42e-10,22;UBERON:0003894,7.42e-10,22;UBERON:0004161,7.42e-10,22;UBERON:0008836,7.42e-10,22;UBERON:0009854,1.47e-09,23;UBERON:0009856,1.47e-09,23;UBERON:0005177,3.14e-09,79;UBERON:0002365,5.78e-09,25;UBERON:0002330,5.78e-09,25 | |||
|phase1_expression=3.20297694209588,0,0.454999239389536,0,0,0.503637815735669,0.467225281191051,0.129123323441576,0.985521055061667,1.17032263160997,0,0,0,0.0874204024189974,272.816894927028,362.633203895178,696.064068737506,3.47008381894061,2.4680598049033,19.9463136345074,6.54833334163237,0.297872853602656,0,0.799962113967033,1.60586496747019,0.57423196411502,0.430761996159075,0,0,0,0.221730510655305,89.539324957808,86.1090702618398,126.785344812351,1.1554064790051,1.99481574430191,2.24586291888606,8.78916424547506,0,0,0,3.41522742479223,3.88408282424923,0,0.101376931219515,0,0,2.18025156380447,11.643367684927,11.4713640453827,1.1198913730029,2.87505128729943,0.503347818173209,0,0,0.257259436035947,0.573066879877513,0.515672092277442,2.63011399117477,2.64495489636016,4.43681982454325,0.677689064138264,0,0.449949858640699,0.988866362566974,2.8419204597844,11.9840044207362,27.6637179831519,0.622137673850866,0.675029691658453,1.05162480675691,12.5686433137674,13.2521124570968,0.979926393719632,0.383381884072945,0,27.5289702498472,18.1316020080967,17.3575382579555,3.29715719325485,2.28719109006024,1.56274011167028,8.09630697104005,18.5711661310454,13.5990440521361,16.2045722010517,10.6778760599327,5.77838282058432,0.227178579999552,0.151143120213571,3.47837386442013,17.2084775396277,8.83962733820076,26.445456390253,16.2444104361917,9.85659151614138,19.802663238577,0,0,0,3.52108549441701,0,0,0,2.59789249213457,2.78695852022608,4.04419556011827,9.02052649780574,3.10725460376606,2.07818994690755,11.6235168933311,11.8741536541735,11.3001593655469,3.3158980921577,7.99603208522793,1.25666591329675,3.70792451601561,0.722996784599558,129.153140584682,24.912094891901,93.6368038272069,103.278428917802,3.72783522436244,8.78342391034641,14.0329293565015,1.02182822083437,1.67741174308288,0,1.52484272487678,7.33974133083631,5.49000723382352,1.13088916901578,8.34356736922927,10.7400492078739,18.2853479212413,9.73447578406546,3.97173519016234,67.0553571588401,4.0435641349388,2.31486041475121,2.47228841629137,1.60931473103431,1.80062129805349,5.72678307775717,1.36072998302656,3.07472928683639,2.71735001223214,1.55222022443409,2.37124792226126,1.32374256117473,1.40760899331159,1.7535658594206,0.834141747676794,1.39300866608867,0.411564272815887,2.9855140022774,0.702213187313235,0.51469581422943,0.284163499395593,10.1491628542396,5.8631514995274,1.80062061461015,1.89395788468168,1.57411385397923,2.31400669331067,0.930135779001631,0.804820204198858,0.700592054203017,0.658239399653922,0.492502392237286,1.78351381000883,3.07019973593198,3.29325172936576,4.69722465661301,14.7202963994889,5.65975368086064,0.660837565967596,0.793351699990633,1.91959425481711,5.57368012465052,2.31961430379768,0.403367049246685,0.667134131534611,0.951128130562796,1.42358718463353,1.31759163779209,1.00534083520108,1.79060824837036,1.9496408711912,0.898819408654221,1.29682829924817,1.99141273254367,5.12103332573321,8.22589290790047,2.25415471346161,5.90588850751411,7.75809948670503,10.0995580642059,11.9517055164846,18.1560482014911,30.9287493847508,29.6153193412321,7.41131567717872,120.629011432736,133.463557681865,172.244378086798,214.220288186259,218.024152416185,203.191429721573,117.955416354832,108.630601939274,85.3885995014933,30.1913233707445,29.7712758134803,14.6657706363843,8.5876818502018,9.68746033018326,13.0259750768109,1.66277871149944,4.9267767060326,1.46668478797823,2.03694102930226,0.704070744865506,2.34508760418542,3.57065461329021,4.48807390072937,2.52216230569906,2.43611158613652,1.59454768657487,6.39066927391378,5.35323443784276,4.91806799177139,0,0.54390568381871,2.95058563811422,4.69092468718045,7.86697890940181,7.03270119553219,0.491804836130026,5.30188947129183,1.57754109708128,0.780877488593277,2.36965737506079,0.955875191810208,0.445597348164788,0.566153061577665,1.21443210502468,1.16902343164525,0.395287777946524,4.17717711348349,3.83238230062325,5.69809931735217,9.12166972380026,6.76377504187395,3.98235415019888,8.01176099311439,5.44182402536552,2.64047111658257,3.83892460745005,3.07435147943927,3.87642439752332,4.72593848320757,4.63446591900138,3.16036757935816,5.27093042874994,5.15677716240934,1.70219802876894,3.96134406868882,4.52755393239641,4.92975180572662,4.43350584105684,4.63758925765383,4.44282355625727,5.78483403317739,5.63212099352905,10.8034356140548,0.661585194164886,1.97863503529776,2.42196640043858,1.56813604813205,1.43246812803764,1.96969079694074,0.582961673259701,9.08583979851498,206.412024003806,17.5428837768739,57.9658870667198,304.215058062576,236.754402412816,284.142491122501,1.35982743995084,1.25956307091292,1.79659965945751,5.72802370809068,4.27053591334533,5.48962561242491,3.13215488383224,3.13632444021703,1.9652630737156,5.25970950900801,7.43881101528023,11.2555055053133,4.01806417204558,3.10669656543463,3.94585057078933,1.34564891439581,2.97825282822776,2.33341426012857,4.26227417476513,1.35164900392623,3.87278887530988,2.99470085141085,3.98465508817701,4.1069300540421,3.16833006883652,0.316011120628178,1.41907650703115,1.43795340030758,0.77952493786677,0.716106782669926,0.993406773906324,1.32214994471966,1.18151621739662,0.908698049533329,0.838274873204998,1.61321896218945,1.46186821109629,1.73181314952593,1.63627663054197,0.453460767230423,1.99787358036658,1.88399098879899,1.00730769818447,0.965947970160952,6.38120416534019,9.52388446189778,1.71494703263253,0,5.0827665835536,9.66682996665071,14.8952833494243,15.1230800462445,12.3314853558716,12.0863023582352,10.1253375034771,7.65546045481175,6.34399372577886,8.80192529978094,1.3492355185943,13.167820822234,27.1466433149073,37.4384344285173,28.5073901174056,11.5821410323509,13.1125569402953,12.9802086060503,15.7250412699989,16.172621552883,17.2365923925363,13.9583492625696,12.4543204934944,14.7257850531199,13.0952869218798,11.4310485907938,14.4855407431069,13.5036454324594,11.5384052224926,13.1007038919614,13.0290315906458,12.2458306249943,12.8755542571553,11.9184061638509,12.516547595239,14.5537125573684,18.1098693144045,12.1012067261408,13.0371949292027,17.3954104213899,12.1007718486658,13.2981051207011,11.867700251921,12.2400104536913,16.0112487114347,3.99696924700713,8.88940112092552,15.6855869455258,3.44318997723918,26.6915617134614,18.3175590140133 | |phase1_expression=3.20297694209588,0,0.454999239389536,0,0,0.503637815735669,0.467225281191051,0.129123323441576,0.985521055061667,1.17032263160997,0,0,0,0.0874204024189974,272.816894927028,362.633203895178,696.064068737506,3.47008381894061,2.4680598049033,19.9463136345074,6.54833334163237,0.297872853602656,0,0.799962113967033,1.60586496747019,0.57423196411502,0.430761996159075,0,0,0,0.221730510655305,89.539324957808,86.1090702618398,126.785344812351,1.1554064790051,1.99481574430191,2.24586291888606,8.78916424547506,0,0,0,3.41522742479223,3.88408282424923,0,0.101376931219515,0,0,2.18025156380447,11.643367684927,11.4713640453827,1.1198913730029,2.87505128729943,0.503347818173209,0,0,0.257259436035947,0.573066879877513,0.515672092277442,2.63011399117477,2.64495489636016,4.43681982454325,0.677689064138264,0,0.449949858640699,0.988866362566974,2.8419204597844,11.9840044207362,27.6637179831519,0.622137673850866,0.675029691658453,1.05162480675691,12.5686433137674,13.2521124570968,0.979926393719632,0.383381884072945,0,27.5289702498472,18.1316020080967,17.3575382579555,3.29715719325485,2.28719109006024,1.56274011167028,8.09630697104005,18.5711661310454,13.5990440521361,16.2045722010517,10.6778760599327,5.77838282058432,0.227178579999552,0.151143120213571,3.47837386442013,17.2084775396277,8.83962733820076,26.445456390253,16.2444104361917,9.85659151614138,19.802663238577,0,0,0,3.52108549441701,0,0,0,2.59789249213457,2.78695852022608,4.04419556011827,9.02052649780574,3.10725460376606,2.07818994690755,11.6235168933311,11.8741536541735,11.3001593655469,3.3158980921577,7.99603208522793,1.25666591329675,3.70792451601561,0.722996784599558,129.153140584682,24.912094891901,93.6368038272069,103.278428917802,3.72783522436244,8.78342391034641,14.0329293565015,1.02182822083437,1.67741174308288,0,1.52484272487678,7.33974133083631,5.49000723382352,1.13088916901578,8.34356736922927,10.7400492078739,18.2853479212413,9.73447578406546,3.97173519016234,67.0553571588401,4.0435641349388,2.31486041475121,2.47228841629137,1.60931473103431,1.80062129805349,5.72678307775717,1.36072998302656,3.07472928683639,2.71735001223214,1.55222022443409,2.37124792226126,1.32374256117473,1.40760899331159,1.7535658594206,0.834141747676794,1.39300866608867,0.411564272815887,2.9855140022774,0.702213187313235,0.51469581422943,0.284163499395593,10.1491628542396,5.8631514995274,1.80062061461015,1.89395788468168,1.57411385397923,2.31400669331067,0.930135779001631,0.804820204198858,0.700592054203017,0.658239399653922,0.492502392237286,1.78351381000883,3.07019973593198,3.29325172936576,4.69722465661301,14.7202963994889,5.65975368086064,0.660837565967596,0.793351699990633,1.91959425481711,5.57368012465052,2.31961430379768,0.403367049246685,0.667134131534611,0.951128130562796,1.42358718463353,1.31759163779209,1.00534083520108,1.79060824837036,1.9496408711912,0.898819408654221,1.29682829924817,1.99141273254367,5.12103332573321,8.22589290790047,2.25415471346161,5.90588850751411,7.75809948670503,10.0995580642059,11.9517055164846,18.1560482014911,30.9287493847508,29.6153193412321,7.41131567717872,120.629011432736,133.463557681865,172.244378086798,214.220288186259,218.024152416185,203.191429721573,117.955416354832,108.630601939274,85.3885995014933,30.1913233707445,29.7712758134803,14.6657706363843,8.5876818502018,9.68746033018326,13.0259750768109,1.66277871149944,4.9267767060326,1.46668478797823,2.03694102930226,0.704070744865506,2.34508760418542,3.57065461329021,4.48807390072937,2.52216230569906,2.43611158613652,1.59454768657487,6.39066927391378,5.35323443784276,4.91806799177139,0,0.54390568381871,2.95058563811422,4.69092468718045,7.86697890940181,7.03270119553219,0.491804836130026,5.30188947129183,1.57754109708128,0.780877488593277,2.36965737506079,0.955875191810208,0.445597348164788,0.566153061577665,1.21443210502468,1.16902343164525,0.395287777946524,4.17717711348349,3.83238230062325,5.69809931735217,9.12166972380026,6.76377504187395,3.98235415019888,8.01176099311439,5.44182402536552,2.64047111658257,3.83892460745005,3.07435147943927,3.87642439752332,4.72593848320757,4.63446591900138,3.16036757935816,5.27093042874994,5.15677716240934,1.70219802876894,3.96134406868882,4.52755393239641,4.92975180572662,4.43350584105684,4.63758925765383,4.44282355625727,5.78483403317739,5.63212099352905,10.8034356140548,0.661585194164886,1.97863503529776,2.42196640043858,1.56813604813205,1.43246812803764,1.96969079694074,0.582961673259701,9.08583979851498,206.412024003806,17.5428837768739,57.9658870667198,304.215058062576,236.754402412816,284.142491122501,1.35982743995084,1.25956307091292,1.79659965945751,5.72802370809068,4.27053591334533,5.48962561242491,3.13215488383224,3.13632444021703,1.9652630737156,5.25970950900801,7.43881101528023,11.2555055053133,4.01806417204558,3.10669656543463,3.94585057078933,1.34564891439581,2.97825282822776,2.33341426012857,4.26227417476513,1.35164900392623,3.87278887530988,2.99470085141085,3.98465508817701,4.1069300540421,3.16833006883652,0.316011120628178,1.41907650703115,1.43795340030758,0.77952493786677,0.716106782669926,0.993406773906324,1.32214994471966,1.18151621739662,0.908698049533329,0.838274873204998,1.61321896218945,1.46186821109629,1.73181314952593,1.63627663054197,0.453460767230423,1.99787358036658,1.88399098879899,1.00730769818447,0.965947970160952,6.38120416534019,9.52388446189778,1.71494703263253,0,5.0827665835536,9.66682996665071,14.8952833494243,15.1230800462445,12.3314853558716,12.0863023582352,10.1253375034771,7.65546045481175,6.34399372577886,8.80192529978094,1.3492355185943,13.167820822234,27.1466433149073,37.4384344285173,28.5073901174056,11.5821410323509,13.1125569402953,12.9802086060503,15.7250412699989,16.172621552883,17.2365923925363,13.9583492625696,12.4543204934944,14.7257850531199,13.0952869218798,11.4310485907938,14.4855407431069,13.5036454324594,11.5384052224926,13.1007038919614,13.0290315906458,12.2458306249943,12.8755542571553,11.9184061638509,12.516547595239,14.5537125573684,18.1098693144045,12.1012067261408,13.0371949292027,17.3954104213899,12.1007718486658,13.2981051207011,11.867700251921,12.2400104536913,16.0112487114347,3.99696924700713,8.88940112092552,15.6855869455258,3.44318997723918,26.6915617134614,18.3175590140133 | ||
|short_description=p1@Tspan33 | |short_description=p1@Tspan33 | ||
}} | }} |
Latest revision as of 01:01, 27 September 2015
Short description: | p1@Tspan33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tspan33_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000046750, ENSMUST00000115250_5end |
EntrezGene: | Tspan33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.44e-13 | 49 |
abdominal segment element | 1.44e-13 | 49 |
abdominal segment of trunk | 1.44e-13 | 49 |
abdomen | 1.44e-13 | 49 |
subdivision of trunk | 5.65e-10 | 66 |
liver | 7.42e-10 | 22 |
epithelial sac | 7.42e-10 | 22 |
digestive gland | 7.42e-10 | 22 |
epithelium of foregut-midgut junction | 7.42e-10 | 22 |
anatomical boundary | 7.42e-10 | 22 |
hepatobiliary system | 7.42e-10 | 22 |
foregut-midgut junction | 7.42e-10 | 22 |
hepatic diverticulum | 7.42e-10 | 22 |
liver primordium | 7.42e-10 | 22 |
septum transversum | 7.42e-10 | 22 |
liver bud | 7.42e-10 | 22 |
digestive tract diverticulum | 1.47e-09 | 23 |
sac | 1.47e-09 | 23 |
trunk region element | 3.14e-09 | 79 |
exocrine gland | 5.78e-09 | 25 |
exocrine system | 5.78e-09 | 25 |