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FFCP PHASE1:Mm9::chr2:79969097..79969153,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18573
|EntrezGene=18573
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q8BRR9
|UniProt=Q8BRR9
|association_with_transcript=0bp_to_NM_016744,uc012bxz.1_5end
|association_with_transcript=0bp_to_NM_016744,uc012bxz.1_5end
|cluster_id=chr2:79969097..79969153,-
|description=CAGE_peak_2_at_Pde1a_5end
|description=CAGE_peak_2_at_Pde1a_5end
|id=chr2:79969097..79969153,-
|id=chr2:79969097..79969153,-
|ontology_enrichment_celltype=CL:0002319!9.26e-13!43;CL:0000221!3.83e-12!44;CL:0000133!3.83e-12!44;CL:0000540!6.15e-12!33;CL:0000047!6.15e-12!33;CL:0000031!6.15e-12!33;CL:0000404!6.15e-12!33;CL:0000055!1.15e-11!50;CL:0000393!3.53e-11!39;CL:0000211!3.53e-11!39;CL:0000117!2.82e-08!23;CL:0000337!2.82e-08!23
|ontology_enrichment_celltype=CL:0002319!9.26e-13!43;CL:0000221!3.83e-12!44;CL:0000133!3.83e-12!44;CL:0000540!6.15e-12!33;CL:0000047!6.15e-12!33;CL:0000031!6.15e-12!33;CL:0000404!6.15e-12!33;CL:0000055!1.15e-11!50;CL:0000393!3.53e-11!39;CL:0000211!3.53e-11!39;CL:0000117!2.82e-08!23;CL:0000337!2.82e-08!23
|ontology_enrichment_celltype_v019_2=CL:0002319,6.78e-08,43;CL:0000221,1.34e-07,44;CL:0000133,1.34e-07,44;CL:0000393,1.79e-07,39;CL:0000211,1.79e-07,39;CL:0000540,2.08e-07,33;CL:0000047,2.08e-07,33;CL:0000031,2.08e-07,33;CL:0000404,2.08e-07,33;CL:0000117,8.07e-07,23;CL:0000337,8.07e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.48e-32!73;UBERON:0005743!3.48e-32!73;UBERON:0000073!5.00e-32!75;UBERON:0001016!5.00e-32!75;UBERON:0001049!1.18e-24!52;UBERON:0005068!1.18e-24!52;UBERON:0006241!1.18e-24!52;UBERON:0007135!1.18e-24!52;UBERON:0000955!2.79e-24!50;UBERON:0006238!2.79e-24!50;UBERON:0002616!1.65e-23!49;UBERON:0002346!2.76e-22!71;UBERON:0003075!2.76e-22!71;UBERON:0007284!2.76e-22!71;UBERON:0004121!6.06e-22!102;UBERON:0000924!6.06e-22!102;UBERON:0006601!6.06e-22!102;UBERON:0000033!2.11e-21!63;UBERON:0003080!5.31e-21!40;UBERON:0002780!2.92e-20!39;UBERON:0001890!2.92e-20!39;UBERON:0006240!2.92e-20!39;UBERON:0003056!4.70e-20!49;UBERON:0002020!4.40e-19!34;UBERON:0002791!1.65e-16!29;UBERON:0003528!1.65e-16!29;UBERON:0001893!1.65e-16!29;UBERON:0000956!2.68e-12!21;UBERON:0001869!2.68e-12!21;UBERON:0000203!2.68e-12!21;UBERON:0002619!2.01e-11!17;UBERON:0007811!5.75e-10!86;UBERON:0002021!1.19e-09!10;UBERON:0000411!1.19e-09!10;UBERON:0001950!1.19e-09!10;UBERON:0000153!6.46e-08!94;UBERON:0000025!6.60e-07!114
|ontology_enrichment_uberon=UBERON:0001017!3.48e-32!73;UBERON:0005743!3.48e-32!73;UBERON:0000073!5.00e-32!75;UBERON:0001016!5.00e-32!75;UBERON:0001049!1.18e-24!52;UBERON:0005068!1.18e-24!52;UBERON:0006241!1.18e-24!52;UBERON:0007135!1.18e-24!52;UBERON:0000955!2.79e-24!50;UBERON:0006238!2.79e-24!50;UBERON:0002616!1.65e-23!49;UBERON:0002346!2.76e-22!71;UBERON:0003075!2.76e-22!71;UBERON:0007284!2.76e-22!71;UBERON:0004121!6.06e-22!102;UBERON:0000924!6.06e-22!102;UBERON:0006601!6.06e-22!102;UBERON:0000033!2.11e-21!63;UBERON:0003080!5.31e-21!40;UBERON:0002780!2.92e-20!39;UBERON:0001890!2.92e-20!39;UBERON:0006240!2.92e-20!39;UBERON:0003056!4.70e-20!49;UBERON:0002020!4.40e-19!34;UBERON:0002791!1.65e-16!29;UBERON:0003528!1.65e-16!29;UBERON:0001893!1.65e-16!29;UBERON:0000956!2.68e-12!21;UBERON:0001869!2.68e-12!21;UBERON:0000203!2.68e-12!21;UBERON:0002619!2.01e-11!17;UBERON:0007811!5.75e-10!86;UBERON:0002021!1.19e-09!10;UBERON:0000411!1.19e-09!10;UBERON:0001950!1.19e-09!10;UBERON:0000153!6.46e-08!94;UBERON:0000025!6.60e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.05e-35,73;UBERON:0000073,4.32e-35,54;UBERON:0001016,4.22e-34,75;UBERON:0001049,2.58e-32,52;UBERON:0005068,2.58e-32,52;UBERON:0006241,2.58e-32,52;UBERON:0007135,2.58e-32,52;UBERON:0000955,3.41e-29,47;UBERON:0006238,3.41e-29,47;UBERON:0002346,7.03e-29,64;UBERON:0003075,7.03e-29,64;UBERON:0007284,7.03e-29,64;UBERON:0002616,6.18e-28,46;UBERON:0003080,3.09e-27,40;UBERON:0002780,5.35e-26,39;UBERON:0001890,5.35e-26,39;UBERON:0006240,5.35e-26,39;UBERON:0004121,3.11e-25,95;UBERON:0000924,3.11e-25,95;UBERON:0006601,3.11e-25,95;UBERON:0010371,8.26e-24,73;UBERON:0002020,1.72e-23,34;UBERON:0003056,6.16e-22,49;UBERON:0003528,1.84e-20,29;UBERON:0002791,1.84e-20,29;UBERON:0001893,1.84e-20,29;UBERON:0002619,6.98e-18,17;UBERON:0010314,2.04e-16,92;UBERON:0002021,4.09e-16,10;UBERON:0000411,4.09e-16,10;UBERON:0001950,4.09e-16,10;UBERON:0000956,7.11e-16,21;UBERON:0001869,7.11e-16,21;UBERON:0000203,7.11e-16,21;UBERON:0000025,3.00e-10,114;UBERON:0004111,7.13e-09,122;UBERON:0011216,3.84e-07,194
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,10.2902381082794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,2.63580021170738,0.367093504323363,0,1.74420125104357,1.09843091367236,1.55543919259427,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0.420649922702764,1.14260393761521,0.662605622854841,1.10241719293459,0.958454710182364,0,6.60695285996332,8.17198963745201,7.0659005297872,0.659431438650969,0.548925861614458,1.04182674111352,1.95428099300967,6.75315132038016,17.1134037510027,2.94628585473668,3.84403538157578,2.60959224155421,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,7.04016005202667,32.4825428001225,4.64921102817598,119.417307972094,116.606248542631,19.1165000994795,34.8818715595679,0,0,0.252722758433675,0.841767423545896,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0,0,0.374806898238915,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,87.2703286541128,10.7020796874456,0,0,1.49301775374664,0,1.03093969057675,1.21010114774006,0.444756087689741,0.760902504450237,0,0.658795818896044,0.502670417600539,0,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0,0,0,0,0,0.630540576424764,0.8858587585951,0.797273843287435,0.163863314715738,0,0.144649058581512,0,0,0,0,5.61927064957272,3.98519734413491,0,0,4.10160685241134,4.29482618726302,0.861693590931196,0.716906393857656,1.55959071857676,0.849229592366497,0.809621403349789,0.292255857911312,1.58115111178609,8.03303291054518,0,0,0,0,0,0.728341908464944,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,6.12791290356818,0.18006109403131,0,0.214337035031592,3.01478397191865,4.8159580752559,5.26556865926787,4.26250928760439,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,2.21435195506795,0.406638934253697,0.324016022465404,0.627264888043406,0.218362563746178,0.674321731924103,0.578574190077352,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,95.4430614022842,109.557406288708,95.6735507443792,85.5828848071564,106.18779056445,119.352235787573,125.554185043116,147.705354657544,154.974703872598,119.084871702919,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.735374033800057,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,1.32038438970253,0.561849044819294,0.704276676453562,1.43588672389033,0.476293691283074,0.811190281613988,0.192909220463705,2.06042950401653,1.17759136107518,0.342869252385415,0.70990322463735,1.43061713968393,1.16277133305863,0.564656282491984,0.423073039458382,1.46342378298218,0.789209134313529,1.08643291076689,1.68342681497322,0.593175090620871,1.18205378850676,0.409231043169689,1.23949472948773,0.385813221962283,0.499621155875892,0.233931608445408,0.859484216193193,0.382576664137687,0,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,10.2902381082794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,2.63580021170738,0.367093504323363,0,1.74420125104357,1.09843091367236,1.55543919259427,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0.420649922702764,1.14260393761521,0.662605622854841,1.10241719293459,0.958454710182364,0,6.60695285996332,8.17198963745201,7.0659005297872,0.659431438650969,0.548925861614458,1.04182674111352,1.95428099300967,6.75315132038016,17.1134037510027,2.94628585473668,3.84403538157578,2.60959224155421,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,7.04016005202667,32.4825428001225,4.64921102817598,119.417307972094,116.606248542631,19.1165000994795,34.8818715595679,0,0,0.252722758433675,0.841767423545896,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0,0,0.374806898238915,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,87.2703286541128,10.7020796874456,0,0,1.49301775374664,0,1.03093969057675,1.21010114774006,0.444756087689741,0.760902504450237,0,0.658795818896044,0.502670417600539,0,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0,0,0,0,0,0.630540576424764,0.8858587585951,0.797273843287435,0.163863314715738,0,0.144649058581512,0,0,0,0,5.61927064957272,3.98519734413491,0,0,4.10160685241134,4.29482618726302,0.861693590931196,0.716906393857656,1.55959071857676,0.849229592366497,0.809621403349789,0.292255857911312,1.58115111178609,8.03303291054518,0,0,0,0,0,0.728341908464944,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,6.12791290356818,0.18006109403131,0,0.214337035031592,3.01478397191865,4.8159580752559,5.26556865926787,4.26250928760439,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,2.21435195506795,0.406638934253697,0.324016022465404,0.627264888043406,0.218362563746178,0.674321731924103,0.578574190077352,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,95.4430614022842,109.557406288708,95.6735507443792,85.5828848071564,106.18779056445,119.352235787573,125.554185043116,147.705354657544,154.974703872598,119.084871702919,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.735374033800057,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,1.32038438970253,0.561849044819294,0.704276676453562,1.43588672389033,0.476293691283074,0.811190281613988,0.192909220463705,2.06042950401653,1.17759136107518,0.342869252385415,0.70990322463735,1.43061713968393,1.16277133305863,0.564656282491984,0.423073039458382,1.46342378298218,0.789209134313529,1.08643291076689,1.68342681497322,0.593175090620871,1.18205378850676,0.409231043169689,1.23949472948773,0.385813221962283,0.499621155875892,0.233931608445408,0.859484216193193,0.382576664137687,0,0
|short_description=p2@Pde1a
|short_description=p2@Pde1a
}}
}}

Latest revision as of 01:03, 27 September 2015

Short description:p2@Pde1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pde1a_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_NM_016744, uc012bxz.1_5end
EntrezGene:Pde1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pde1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D5119.42
cortex, neonate N30.CNhs11107.1392-42F2116.61
diencephalon, adult.CNhs10482.20-12F219.12
diencephalon, neonate N30.CNhs11201.1388-42B234.88
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E887.27
hippocampus, neonate N00.CNhs11228.627-43G110.70
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A195.44
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2109.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A395.67
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D785.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4106.19
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5119.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6125.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7147.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8154.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9119.08
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell6.78e-0843
ectodermal cell1.34e-0744
neurectodermal cell1.34e-0744
electrically responsive cell1.79e-0739
electrically active cell1.79e-0739
neuron2.08e-0733
neuronal stem cell2.08e-0733
neuroblast2.08e-0733
electrically signaling cell2.08e-0733
CNS neuron (sensu Vertebrata)8.07e-0723
neuroblast (sensu Vertebrata)8.07e-0723

Uber anatomy
Ontology termp-valuen
central nervous system2.05e-3573
regional part of nervous system4.32e-3554
nervous system4.22e-3475
neural tube2.58e-3252
neural rod2.58e-3252
future spinal cord2.58e-3252
neural keel2.58e-3252
brain3.41e-2947
future brain3.41e-2947
neurectoderm7.03e-2964
neural plate7.03e-2964
presumptive neural plate7.03e-2964
regional part of brain6.18e-2846
anterior neural tube3.09e-2740
regional part of forebrain5.35e-2639
forebrain5.35e-2639
future forebrain5.35e-2639
ectoderm-derived structure3.11e-2595
ectoderm3.11e-2595
presumptive ectoderm3.11e-2595
ecto-epithelium8.26e-2473
gray matter1.72e-2334
pre-chordal neural plate6.16e-2249
brain grey matter1.84e-2029
regional part of telencephalon1.84e-2029
telencephalon1.84e-2029
regional part of cerebral cortex6.98e-1817
structure with developmental contribution from neural crest2.04e-1692
occipital lobe4.09e-1610
visual cortex4.09e-1610
neocortex4.09e-1610
cerebral cortex7.11e-1621
cerebral hemisphere7.11e-1621
pallium7.11e-1621
tube3.00e-10114
anatomical conduit7.13e-09122
organ system subdivision3.84e-07194
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