FFCP PHASE1:Mm9::chr18:10182066..10182090,-: Difference between revisions
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{{FFCP|EntrezGene=19877|HGNC=|MCL_coexpression_id=2229|UniProt=P70335,Q3UE22|association_with_transcript=-276bp_to_ENSMUST00000067947,NM_009071,uc008eaq.1,uc008ear.1_5end|description=CAGE_peak_1_at_Rock1_5end|id=chr18:10182066..10182090,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.61e-09!130;UBERON:0000925!1.61e-09!130;UBERON:0006595!1.61e-09!130;UBERON:0001007!2.98e-09!128;UBERON:0001555!2.98e-09!128;UBERON:0007026!2.98e-09!128;UBERON:0004921!6.81e-09!126;UBERON:0004185!6.81e-09!126;UBERON:0004872!2.01e-08!33;UBERON:0005409!6.77e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.42e-10,118;UBERON:0000925,1.42e-10,118;UBERON:0006595,1.42e-10,118;UBERON:0001007,2.66e-10,116;UBERON:0001555,2.66e-10,116;UBERON:0007026,2.66e-10,116;UBERON:0004921,6.30e-10,114;UBERON:0005409,8.23e-09,47;UBERON:0004872,2.01e-08,33;UBERON:0000160,6.45e-07,31|phase1_expression=8.32774004944929,28.6159834264276,35.0349414329943,22.0798874253986,45.5815114251176,27.364321321638,28.2671295120586,17.6898953114959,70.535149797985,84.4972940022396,24.3129514880217,17.8689636149554,19.3456824822262,18.4457049104085,17.6548173762301,31.1811911780332,27.9824751251259,16.0885704332701,15.4939309974485,18.2487550273153,9.0145887560134,6.85107563286109,7.05239430675126,14.2393256286132,13.9939661450974,25.8404383851759,24.5534337810673,23.9173068281337,17.29213117053,17.6421090831952,13.5255611499736,3.17515336729816,3.07532393792285,0,9.82095507154334,6.81562045969819,8.77928231928187,63.61680787201,25.0027310247616,46.0700894696943,71.7642415397837,72.4028214055952,59.2322630698007,10.9530231638752,12.8748702648783,8.9937908559224,1.56478268869608,2.39827672018491,1.97717564461025,2.91644848611425,3.3596741190087,1.43752564364972,17.1138258178891,21.7608642603403,19.1573465511204,15.6928255981928,26.6476099143044,20.6268836910977,1.61853168687678,0.528990979272033,1.26766280701236,3.72728985276045,3.55717918444456,3.1496490104849,0.988866362566974,2.1314403448383,2.99600110518405,3.07374644257244,1.8664130215526,2.56511282830212,1.68259969081106,1.99955689082663,1.98781686856452,1.5923803897944,2.20444583341944,2.75765635983006,3.30347642998166,2.042997409363,2.76491759861238,2.37395317914349,0.914876436024097,2.6045668527838,2.79182999001381,5.06486349028512,3.51435969886663,3.83017161115768,3.55929201997757,1.1183966749518,11.510381386644,9.74873125377533,39.4215704634282,11.185510400758,7.47968467078526,5.93673510801599,4.54843492213368,10.3046184032387,7.8648875273781,13.4639954836666,11.950156211732,8.12681021373782,10.7040999030277,7.69958864485907,12.7402619853323,7.11066703153331,9.09262372247099,10.1343946190039,6.57181778519218,11.0758363327488,18.6435276225964,12.7660239595749,6.41895709034703,13.0920155674221,6.45723392316964,6.48107354376277,9.99504010653491,9.17366116706631,19.5284024510155,51.9111691342483,23.8844849026466,12.9413479957927,19.2132121060542,23.7588874036259,26.0948465705371,5.27005434620785,4.1889341362691,24.5238773000248,15.4561510612637,5.99902730993408,14.9942867946216,3.44518470631092,3.66000482254901,2.51308704225729,4.69325664519146,4.34716277461562,4.36354893575076,4.54275536589721,11.2023300235348,17.416975885413,10.3616330957807,6.10281382070775,8.45782879257574,6.89706313300419,8.46292010085141,9.49440352365005,9.5251098811859,11.2740073850668,8.4331552103756,11.3829483125167,6.03590380211958,10.2117283290622,9.50136070485324,8.11024209982027,10.0097009721215,8.358051996532,10.0833246839892,8.7575077400137,4.21327912387941,9.52187256324446,9.66155897945015,12.0132948070591,14.0715635988658,12.244220179349,14.2046841351126,12.7896750635812,12.3413690309903,14.8821724640261,16.3646774853768,14.1286064264275,15.1395061920402,24.6251196118643,30.2386659606042,31.4329972964464,23.7114124514335,25.4992195644706,4.6263788684108,4.01327988279209,23.7901523748335,16.3959351331397,13.0105832826493,12.3085436086032,13.0156135935314,13.9161631990106,12.6755484991576,11.4135375667535,15.1849299694244,11.3642278759568,12.5667604400135,16.7123436514567,11.1129529657898,20.6728463990471,14.6973873914792,19.515844778928,3.22435431620239,7.88314737007129,9.01661885384643,9.57161240872977,10.4734343070518,9.8190147846446,12.4575978134787,9.88987991463334,8.32093257559286,11.7227305725711,12.4510103376603,15.8502850430289,18.0834275504147,18.438693215558,30.6318783296639,24.6000702947465,22.1524491049835,17.5494643844994,8.59316701907687,9.60964946158285,25.8782771749238,10.4199465347181,6.86482880852033,12.1237861414614,8.96987067609561,12.5435315554475,30.4842763774898,8.90609635321278,13.6890580211302,11.5426658327128,11.2651319178481,19.4307258632506,23.0902331659433,27.123577052234,23.0147310395039,12.4020226203314,22.3236676120482,28.6760800752541,22.9671025881641,24.87963807602,12.0633027151418,10.3342079925555,7.86822836830458,10.7615331058846,5.13761887960934,5.508949269833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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19877 | |||
|HGNC= | |||
|MCL_coexpression_id=2229 | |||
|TSSclassifier=NA | |||
|UniProt=P70335,Q3UE22 | |||
|association_with_transcript=-276bp_to_ENSMUST00000067947,NM_009071,uc008eaq.1,uc008ear.1_5end | |||
|cluster_id=chr18:10182066..10182090,- | |||
|description=CAGE_peak_1_at_Rock1_5end | |||
|id=chr18:10182066..10182090,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.61e-09!130;UBERON:0000925!1.61e-09!130;UBERON:0006595!1.61e-09!130;UBERON:0001007!2.98e-09!128;UBERON:0001555!2.98e-09!128;UBERON:0007026!2.98e-09!128;UBERON:0004921!6.81e-09!126;UBERON:0004185!6.81e-09!126;UBERON:0004872!2.01e-08!33;UBERON:0005409!6.77e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.42e-10,118;UBERON:0000925,1.42e-10,118;UBERON:0006595,1.42e-10,118;UBERON:0001007,2.66e-10,116;UBERON:0001555,2.66e-10,116;UBERON:0007026,2.66e-10,116;UBERON:0004921,6.30e-10,114;UBERON:0005409,8.23e-09,47;UBERON:0004872,2.01e-08,33;UBERON:0000160,6.45e-07,31 | |||
|phase1_expression=8.32774004944929,28.6159834264276,35.0349414329943,22.0798874253986,45.5815114251176,27.364321321638,28.2671295120586,17.6898953114959,70.535149797985,84.4972940022396,24.3129514880217,17.8689636149554,19.3456824822262,18.4457049104085,17.6548173762301,31.1811911780332,27.9824751251259,16.0885704332701,15.4939309974485,18.2487550273153,9.0145887560134,6.85107563286109,7.05239430675126,14.2393256286132,13.9939661450974,25.8404383851759,24.5534337810673,23.9173068281337,17.29213117053,17.6421090831952,13.5255611499736,3.17515336729816,3.07532393792285,0,9.82095507154334,6.81562045969819,8.77928231928187,63.61680787201,25.0027310247616,46.0700894696943,71.7642415397837,72.4028214055952,59.2322630698007,10.9530231638752,12.8748702648783,8.9937908559224,1.56478268869608,2.39827672018491,1.97717564461025,2.91644848611425,3.3596741190087,1.43752564364972,17.1138258178891,21.7608642603403,19.1573465511204,15.6928255981928,26.6476099143044,20.6268836910977,1.61853168687678,0.528990979272033,1.26766280701236,3.72728985276045,3.55717918444456,3.1496490104849,0.988866362566974,2.1314403448383,2.99600110518405,3.07374644257244,1.8664130215526,2.56511282830212,1.68259969081106,1.99955689082663,1.98781686856452,1.5923803897944,2.20444583341944,2.75765635983006,3.30347642998166,2.042997409363,2.76491759861238,2.37395317914349,0.914876436024097,2.6045668527838,2.79182999001381,5.06486349028512,3.51435969886663,3.83017161115768,3.55929201997757,1.1183966749518,11.510381386644,9.74873125377533,39.4215704634282,11.185510400758,7.47968467078526,5.93673510801599,4.54843492213368,10.3046184032387,7.8648875273781,13.4639954836666,11.950156211732,8.12681021373782,10.7040999030277,7.69958864485907,12.7402619853323,7.11066703153331,9.09262372247099,10.1343946190039,6.57181778519218,11.0758363327488,18.6435276225964,12.7660239595749,6.41895709034703,13.0920155674221,6.45723392316964,6.48107354376277,9.99504010653491,9.17366116706631,19.5284024510155,51.9111691342483,23.8844849026466,12.9413479957927,19.2132121060542,23.7588874036259,26.0948465705371,5.27005434620785,4.1889341362691,24.5238773000248,15.4561510612637,5.99902730993408,14.9942867946216,3.44518470631092,3.66000482254901,2.51308704225729,4.69325664519146,4.34716277461562,4.36354893575076,4.54275536589721,11.2023300235348,17.416975885413,10.3616330957807,6.10281382070775,8.45782879257574,6.89706313300419,8.46292010085141,9.49440352365005,9.5251098811859,11.2740073850668,8.4331552103756,11.3829483125167,6.03590380211958,10.2117283290622,9.50136070485324,8.11024209982027,10.0097009721215,8.358051996532,10.0833246839892,8.7575077400137,4.21327912387941,9.52187256324446,9.66155897945015,12.0132948070591,14.0715635988658,12.244220179349,14.2046841351126,12.7896750635812,12.3413690309903,14.8821724640261,16.3646774853768,14.1286064264275,15.1395061920402,24.6251196118643,30.2386659606042,31.4329972964464,23.7114124514335,25.4992195644706,4.6263788684108,4.01327988279209,23.7901523748335,16.3959351331397,13.0105832826493,12.3085436086032,13.0156135935314,13.9161631990106,12.6755484991576,11.4135375667535,15.1849299694244,11.3642278759568,12.5667604400135,16.7123436514567,11.1129529657898,20.6728463990471,14.6973873914792,19.515844778928,3.22435431620239,7.88314737007129,9.01661885384643,9.57161240872977,10.4734343070518,9.8190147846446,12.4575978134787,9.88987991463334,8.32093257559286,11.7227305725711,12.4510103376603,15.8502850430289,18.0834275504147,18.438693215558,30.6318783296639,24.6000702947465,22.1524491049835,17.5494643844994,8.59316701907687,9.60964946158285,25.8782771749238,10.4199465347181,6.86482880852033,12.1237861414614,8.96987067609561,12.5435315554475,30.4842763774898,8.90609635321278,13.6890580211302,11.5426658327128,11.2651319178481,19.4307258632506,23.0902331659433,27.123577052234,23.0147310395039,12.4020226203314,22.3236676120482,28.6760800752541,22.9671025881641,24.87963807602,12.0633027151418,10.3342079925555,7.86822836830458,10.7615331058846,5.13761887960934,5.50894926983355,8.6885521049638,9.3414243065618,9.14973836307144,7.41833614163613,9.90947629570875,6.4521575447189,10.9171350300373,10.190755108398,8.90583543684768,11.1057226006299,10.2774822266096,8.67567554338879,15.8972895433261,6.41036173202119,12.8680697889325,23.2607873391275,11.9470624505967,5.82673526771955,8.46505959501303,9.24164890803901,4.72483028609236,11.3751004739253,18.0899805217755,6.90714086007261,12.4774082434652,12.6414703174326,6.32511651449993,11.3449097573006,10.2131881726136,7.20244376125241,2.32845630808958,7.71613326113732,9.3990323830405,8.02659679209317,9.21474515371877,3.65357938937519,15.2536610241412,11.4389318266463,12.1290618930229,15.9939665353236,15.339120536111,14.3544761329011,12.4147237763262,14.1161173780753,17.7803310344209,6.86073617438886,30.7567585436135,8.46186158649212,13.519200497989,28.2552685507037,38.9578549004922,32.4865005953262,20.3974115992626,25.1912614182584,24.5995953371874,8.59203556213602,7.11755985557555,14.4356821660063,11.3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| |||
|short_description=p1@Rock1 | |||
}} |
Latest revision as of 01:12, 27 September 2015
Short description: | p1@Rock1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rock1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2229 |
Association with transcript: | -276bp_to_ENSMUST00000067947, NM_009071, uc008eaq.1, uc008ear.1_5end |
EntrezGene: | Rock1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.42e-10 | 118 |
endoderm | 1.42e-10 | 118 |
presumptive endoderm | 1.42e-10 | 118 |
digestive system | 2.66e-10 | 116 |
digestive tract | 2.66e-10 | 116 |
primitive gut | 2.66e-10 | 116 |
subdivision of digestive tract | 6.30e-10 | 114 |
gastrointestinal system | 8.23e-09 | 47 |
splanchnic layer of lateral plate mesoderm | 2.01e-08 | 33 |
intestine | 6.45e-07 | 31 |