FFCP PHASE1:Mm9::chr1:33964709..33964794,+: Difference between revisions
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{{FFCP|EntrezGene=13518|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-275bp_to_uc007aof.1_5end|description=CAGE_peak_4_at_Dst_5end|id=chr1:33964709..33964794,+|ontology_enrichment_celltype=CL:0000540!2.92e-15!33;CL:0000047!2.92e-15!33;CL:0000031!2.92e-15!33;CL:0000404!2.92e-15!33;CL:0000393!4.07e-15!39;CL:0000211!4.07e-15!39;CL:0002319!1.93e-13!43;CL:0000221!2.05e-13!44;CL:0000133!2.05e-13!44;CL:0000117!4.60e-13!23;CL:0000337!4.60e-13!23;CL:0000055!8.76e-13!50|ontology_enrichment_celltype_v019_2=CL:0000540,5.86e-16,33;CL:0000047,5.86e-16,33;CL:0000031,5.86e-16,33;CL:0000404,5.86e-16,33;CL:0000393,8.31e-16,39;CL:0000211,8.31e-16,39;CL:0002319,4.79e-14,43;CL:0000221,5.11e-14,44;CL:0000133,5.11e-14,44;CL:0000117,1.20e-13,23;CL:0000337,1.20e-13,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.95e-28!73;UBERON:0005743!3.95e-28!73;UBERON:0000073!1.65e-27!75;UBERON:0001016!1.65e-27!75;UBERON:0004121!4.88e-22!102;UBERON:0000924!4.88e-22!102;UBERON:0006601!4.88e-22!102;UBERON:0001049!2.84e-21!52;UBERON:0005068!2.84e-21!52;UBERON:0006241!2.84e-21!52;UBERON:0007135!2.84e-21!52;UBERON:0002346!2.83e-20!71;UBERON:0003075!2.83e-20!71;UBERON:0007284!2.83e-20!71;UBERON:0000955!2.92e-20!50;UBERON:0006238!2.92e-20!50;UBERON:0002616!9.94e-20!49;UBERON:0000033!3.21e-19!63;UBERON:0002020!3.60e-18!34;UBERON:0003056!7.32e-16!49;UBERON:0002791!2.38e-15!29;UBERON:0003528!2.38e-15!29;UBERON:0001893!2.38e-15!29;UBERON:0003080!2.94e-15!40;UBERON:0002780!1.25e-14!39;UBERON:0001890!1.25e-14!39;UBERON:0006240!1.25e-14!39;UBERON:0000956!4.41e-11!21;UBERON:0001869!4.41e-11!21;UBERON:0000203!4.41e-11!21;UBERON:0007811!2.79e-09!86;UBERON:0000025!3.92e-09!114;UBERON:0002619!5.15e-09!17;UBERON:0000153!8.56e-09!94;UBERON:0004111!2.30e-08!122;UBERON:0000468!3.80e-08!333;UBERON:0002021!3.00e-07!10;UBERON:0000411!3.00e-07!10;UBERON:0001950!3.00e-07!10;UBERON:0003076!8.87e-07!12;UBERON:0003057!8.87e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.42e-29,73;UBERON:0001016,1.95e-28,75;UBERON:0004121,2.67e-24,95;UBERON:0000924,2.67e-24,95;UBERON:0006601,2.67e-24,95;UBERON:0002346,1.04e-23,64;UBERON:0003075,1.04e-23,64;UBERON:0007284,1.04e-23,64;UBERON:0000073,2.31e-23,54;UBERON:0001049,7.06e-22,52;UBERON:0005068,7.06e-22,52;UBERON:0006241,7.06e-22,52;UBERON:0007135,7.06e-22,52;UBERON:0010314,1.11e-20,92;UBERON:0010371,8.90e-20,73;UBERON:0002020,5.13e-19,34;UBERON:0000955,1.24e-18,47;UBERON:0006238,1.24e-18,47;UBERON:0002616,4.32e-18,46;UBERON:0003056,3.07e-16,49;UBERON:0003528,4.73e-16,29;UBERON:0002791,4.73e-16,29;UBERON:0001893,4.73e-16,29;UBERON:0003080,1.40e-15,40;UBERON:0002780,6.31e-15,39;UBERON:0001890,6.31e-15,39;UBERON:0006240,6.31e-15,39;UBERON:0000956,1.45e-11,21;UBERON:0001869,1.45e-11,21;UBERON:0000203,1.45e-11,21;UBERON:0002619,2.15e-09,17;UBERON:0000025,5.73e-09,114;UBERON:0004111,3.97e-08,122;UBERON:0002021,1.53e-07,10;UBERON:0000411,1.53e-07,10;UBERON:0001950,1.53e-07,10;UBERON:0003076,4.79e-07,12;UBERON:0003057,4.79e-07,12|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0.666219523631325,1.41732687172878,0,0,0.685572168028694,0.84877930359606,6.37824676133023,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,4.02869817521847,3.95370031756107,6.79122982998222,3.12956537739216,1.30815093828268,2.41654801007919,2.72201858703997,1.53985063787899,1.43752564364972,0,0,0,1.02903774414379,3.15186783932632,1.54701627683233,11.7343547298567,10.0508286061686,9.50747105259269,2.37191172448392,2.66788438833342,1.7997994345628,0,2.1314403448383,2.69640099466564,3.84218305321555,18.1456821539836,9.58542162155004,16.1950220240564,14.8538511889978,9.49734726091938,10.656699531701,6.51749202924007,11.9498442259303,27.5289702498472,26.8143409978894,25.4986845205364,13.0567424852892,9.78917786545783,11.9810075228055,18.1468949350898,15.757353080887,23.6837284054056,25.9273155216828,20.0744069926735,17.1487490159277,2.12033341332915,1.058001841495,0.289864488701678,0,0,0,0.649776417447669,0,0.421333260395256,4.4311883870295,2.07828803682295,3.5333957451034,2.67602497575693,8.98285341900225,15.2883143823987,14.2213340630666,0.216491041011214,0,1.01104889002957,0.68510327831436,0.517875767294343,1.1875371125186,1.21439728736295,0.608930956624282,1.15307748628029,1.50722640552623,1.41106448562846,1.38233250462643,2.22475470960936,2.02439099687876,1.76922110389975,3.72063754879041,1.32504911076236,2.42437626567611,0,47.4304891158706,47.1255090330274,0.255457055208591,0,0,0,22.0192239925089,18.3000241127451,18.9738071690425,20.5112697826886,20.4572365864264,24.5189892580281,21.5780879880118,1.83310854930569,3.11017426525233,0.252722758433675,1.89397670297827,4.42409506073193,2.5289231487682,3.06105620669094,1.50704817835715,3.81004395247436,3.58718416797579,3.74806898238915,7.24369438069244,0.862271971731369,2.45837904218165,2.99116911078713,3.5071317188412,1.94633074457919,2.43776516565517,0.411564272815887,2.18937693500343,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13518 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-275bp_to_uc007aof.1_5end | |||
|cluster_id=chr1:33964709..33964794,+ | |||
|description=CAGE_peak_4_at_Dst_5end | |||
|id=chr1:33964709..33964794,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.92e-15!33;CL:0000047!2.92e-15!33;CL:0000031!2.92e-15!33;CL:0000404!2.92e-15!33;CL:0000393!4.07e-15!39;CL:0000211!4.07e-15!39;CL:0002319!1.93e-13!43;CL:0000221!2.05e-13!44;CL:0000133!2.05e-13!44;CL:0000117!4.60e-13!23;CL:0000337!4.60e-13!23;CL:0000055!8.76e-13!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.86e-16,33;CL:0000047,5.86e-16,33;CL:0000031,5.86e-16,33;CL:0000404,5.86e-16,33;CL:0000393,8.31e-16,39;CL:0000211,8.31e-16,39;CL:0002319,4.79e-14,43;CL:0000221,5.11e-14,44;CL:0000133,5.11e-14,44;CL:0000117,1.20e-13,23;CL:0000337,1.20e-13,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.95e-28!73;UBERON:0005743!3.95e-28!73;UBERON:0000073!1.65e-27!75;UBERON:0001016!1.65e-27!75;UBERON:0004121!4.88e-22!102;UBERON:0000924!4.88e-22!102;UBERON:0006601!4.88e-22!102;UBERON:0001049!2.84e-21!52;UBERON:0005068!2.84e-21!52;UBERON:0006241!2.84e-21!52;UBERON:0007135!2.84e-21!52;UBERON:0002346!2.83e-20!71;UBERON:0003075!2.83e-20!71;UBERON:0007284!2.83e-20!71;UBERON:0000955!2.92e-20!50;UBERON:0006238!2.92e-20!50;UBERON:0002616!9.94e-20!49;UBERON:0000033!3.21e-19!63;UBERON:0002020!3.60e-18!34;UBERON:0003056!7.32e-16!49;UBERON:0002791!2.38e-15!29;UBERON:0003528!2.38e-15!29;UBERON:0001893!2.38e-15!29;UBERON:0003080!2.94e-15!40;UBERON:0002780!1.25e-14!39;UBERON:0001890!1.25e-14!39;UBERON:0006240!1.25e-14!39;UBERON:0000956!4.41e-11!21;UBERON:0001869!4.41e-11!21;UBERON:0000203!4.41e-11!21;UBERON:0007811!2.79e-09!86;UBERON:0000025!3.92e-09!114;UBERON:0002619!5.15e-09!17;UBERON:0000153!8.56e-09!94;UBERON:0004111!2.30e-08!122;UBERON:0000468!3.80e-08!333;UBERON:0002021!3.00e-07!10;UBERON:0000411!3.00e-07!10;UBERON:0001950!3.00e-07!10;UBERON:0003076!8.87e-07!12;UBERON:0003057!8.87e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.42e-29,73;UBERON:0001016,1.95e-28,75;UBERON:0004121,2.67e-24,95;UBERON:0000924,2.67e-24,95;UBERON:0006601,2.67e-24,95;UBERON:0002346,1.04e-23,64;UBERON:0003075,1.04e-23,64;UBERON:0007284,1.04e-23,64;UBERON:0000073,2.31e-23,54;UBERON:0001049,7.06e-22,52;UBERON:0005068,7.06e-22,52;UBERON:0006241,7.06e-22,52;UBERON:0007135,7.06e-22,52;UBERON:0010314,1.11e-20,92;UBERON:0010371,8.90e-20,73;UBERON:0002020,5.13e-19,34;UBERON:0000955,1.24e-18,47;UBERON:0006238,1.24e-18,47;UBERON:0002616,4.32e-18,46;UBERON:0003056,3.07e-16,49;UBERON:0003528,4.73e-16,29;UBERON:0002791,4.73e-16,29;UBERON:0001893,4.73e-16,29;UBERON:0003080,1.40e-15,40;UBERON:0002780,6.31e-15,39;UBERON:0001890,6.31e-15,39;UBERON:0006240,6.31e-15,39;UBERON:0000956,1.45e-11,21;UBERON:0001869,1.45e-11,21;UBERON:0000203,1.45e-11,21;UBERON:0002619,2.15e-09,17;UBERON:0000025,5.73e-09,114;UBERON:0004111,3.97e-08,122;UBERON:0002021,1.53e-07,10;UBERON:0000411,1.53e-07,10;UBERON:0001950,1.53e-07,10;UBERON:0003076,4.79e-07,12;UBERON:0003057,4.79e-07,12 | |||
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| |||
|short_description=p4@Dst | |||
}} |
Latest revision as of 01:46, 27 September 2015
Short description: | p4@Dst |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dst_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -275bp_to_uc007aof.1_5end |
EntrezGene: | Dst |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.86e-16 | 33 |
neuronal stem cell | 5.86e-16 | 33 |
neuroblast | 5.86e-16 | 33 |
electrically signaling cell | 5.86e-16 | 33 |
electrically responsive cell | 8.31e-16 | 39 |
electrically active cell | 8.31e-16 | 39 |
neural cell | 4.79e-14 | 43 |
ectodermal cell | 5.11e-14 | 44 |
neurectodermal cell | 5.11e-14 | 44 |
CNS neuron (sensu Vertebrata) | 1.20e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.20e-13 | 23 |