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FFCP PHASE1:Mm9::chr13:105844877..105844901,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr13:105844877..105844901,-
|DHSsupport=NA
|short_description=p3@Rgs7bp
|DPIdataset=NA
|description=CAGE_peak_3_at_Rgs7bp_5end
|association_with_transcript=108bp_to_ENSMUST00000063551,NM_029879,uc007rtp.1_5end
|EntrezGene=52882
|EntrezGene=52882
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BQP9
|UniProt=Q8BQP9
|association_with_transcript=108bp_to_ENSMUST00000063551,NM_029879,uc007rtp.1_5end
|cluster_id=chr13:105844877..105844901,-
|description=CAGE_peak_3_at_Rgs7bp_5end
|id=chr13:105844877..105844901,-
|ontology_enrichment_celltype=CL:0000117!6.57e-10!23;CL:0000337!6.57e-10!23;CL:0000540!9.86e-10!33;CL:0000047!9.86e-10!33;CL:0000031!9.86e-10!33;CL:0000404!9.86e-10!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.01e-13,23;CL:0000337,2.01e-13,23;CL:0000540,2.66e-11,33;CL:0000047,2.66e-11,33;CL:0000031,2.66e-11,33;CL:0000404,2.66e-11,33;CL:0000393,9.73e-09,39;CL:0000211,9.73e-09,39;CL:0002319,2.06e-08,43;CL:0000221,4.25e-08,44;CL:0000133,4.25e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.51e-19!75;UBERON:0001016!3.51e-19!75;UBERON:0001017!1.09e-18!73;UBERON:0005743!1.09e-18!73;UBERON:0001049!7.48e-16!52;UBERON:0005068!7.48e-16!52;UBERON:0006241!7.48e-16!52;UBERON:0007135!7.48e-16!52;UBERON:0004121!9.07e-16!102;UBERON:0000924!9.07e-16!102;UBERON:0006601!9.07e-16!102;UBERON:0000955!3.98e-15!50;UBERON:0006238!3.98e-15!50;UBERON:0002346!4.78e-15!71;UBERON:0003075!4.78e-15!71;UBERON:0007284!4.78e-15!71;UBERON:0002616!1.51e-14!49;UBERON:0002020!5.63e-14!34;UBERON:0000033!1.81e-13!63;UBERON:0003080!9.23e-12!40;UBERON:0003056!1.50e-11!49;UBERON:0002791!2.86e-11!29;UBERON:0003528!2.86e-11!29;UBERON:0001893!2.86e-11!29;UBERON:0002780!3.35e-11!39;UBERON:0001890!3.35e-11!39;UBERON:0006240!3.35e-11!39;UBERON:0002021!3.95e-08!10;UBERON:0000411!3.95e-08!10;UBERON:0001950!3.95e-08!10;UBERON:0000956!7.56e-08!21;UBERON:0001869!7.56e-08!21;UBERON:0000203!7.56e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.77e-32,75;UBERON:0001017,7.37e-32,73;UBERON:0000073,2.33e-31,54;UBERON:0001049,1.96e-28,52;UBERON:0005068,1.96e-28,52;UBERON:0006241,1.96e-28,52;UBERON:0007135,1.96e-28,52;UBERON:0002346,3.67e-25,64;UBERON:0003075,3.67e-25,64;UBERON:0007284,3.67e-25,64;UBERON:0004121,6.74e-24,95;UBERON:0000924,6.74e-24,95;UBERON:0006601,6.74e-24,95;UBERON:0002020,2.59e-23,34;UBERON:0000955,5.44e-23,47;UBERON:0006238,5.44e-23,47;UBERON:0002616,7.10e-22,46;UBERON:0010371,1.31e-20,73;UBERON:0003080,1.24e-18,40;UBERON:0003528,6.43e-18,29;UBERON:0002791,6.43e-18,29;UBERON:0001893,6.43e-18,29;UBERON:0002780,1.51e-17,39;UBERON:0001890,1.51e-17,39;UBERON:0006240,1.51e-17,39;UBERON:0002021,3.65e-15,10;UBERON:0000411,3.65e-15,10;UBERON:0001950,3.65e-15,10;UBERON:0003056,4.80e-15,49;UBERON:0010314,5.41e-14,92;UBERON:0000956,4.27e-13,21;UBERON:0001869,4.27e-13,21;UBERON:0000203,4.27e-13,21;UBERON:0002619,8.34e-13,17;UBERON:0003076,1.46e-10,12;UBERON:0003057,1.46e-10,12;UBERON:0002240,3.98e-08,6;UBERON:0005174,3.98e-08,6;UBERON:0001137,3.98e-08,6;UBERON:0000025,2.69e-07,114;UBERON:0001948,6.53e-07,5;UBERON:0002315,6.53e-07,5;UBERON:0004111,9.37e-07,122
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.725827286159344,1.4850653216486,0.841299845405528,3.42781181284564,2.65042249141936,1.10241719293459,0.670918297127655,0,27.5289702498472,38.3062014255563,28.1099955858926,0.395658863190582,0.731901148819277,1.56274011167028,12.5632349550621,6.19038871034848,8.55670187550137,4.41942878210502,3.84403538157578,2.79599168737951,0.302904773332736,1.81371744256285,0.869593466105033,0.860423876981386,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.301445281105245,0.470354828542819,0,0.247194967734374,0.722996784599558,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,28.9852989041432,23.2485844562935,0,0,1.19980546198682,0,13.9305294646485,31.5675415944852,2.26177833803156,26.0736480288415,22.7586757023994,28.2591740601002,26.120843353909,0.611036183101898,0.248813941220186,0.505445516867349,0.841767423545896,0,0.229902104433473,0.360124259610698,0.60281927134286,0.136072998302656,0.768682321709099,0.281105173679186,2.06962696591213,0,0.189106080167819,0,0.219195732427575,0.556094498451196,1.39300866608867,0.61734640922383,0,0,0,0.284163499395593,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.658239399653922,0.492502392237286,0.324275238183423,0.146199987425332,0.439100230582101,0.402619256281115,22.9216043934899,1.54356918568927,0,0,0.426576501070468,0.232236671860439,0,0.403367049246685,0.444756087689741,0.190225626112559,0.949058123089023,0.164698954724011,0,0.397912944082302,0.779856348476481,1.79763881730844,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,0.701358198903186,0.252946148497029,0.295220295959204,0,0,0.296452627087149,0.333690211432188,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0,0.312037673114561,0,0.179397413521912,0.964887042726734,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,10.9174401191699,10.9006868530749,0,0.252470927204373,1.26203287766503,1.17131623288992,0.861693590931196,0.238968797952552,0,0.283076530788832,0,0.876767573733936,1.58115111178609,10.9249247583414,0.425820255624806,0,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0.307435147943927,0.775284879504663,0,0.712994756769443,0.632073515871632,1.05418608574999,0,1.02131881726136,0,0.388076051348264,0,0,0.535106452806212,0.822745103010605,1.522324745573,0,0,0,0.16488625294148,0.807322133479528,0.904693873922338,0.238744688006273,0.656563598980245,1.45740418314925,14.8340241608408,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.743881101528023,0.523511883968059,0.90730481304255,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0,0,0,0,1.35232715822533,0.187682475451182,0,0.214368379079066,0,23.7195773899168,19.7939851698086,23.4887160510153,15.8104927756193,28.773465830367,27.9495742034189,22.2757425076496,27.0192721934532,32.6262534468627,29.5123377698537,0.31136204275253,0.399024873401031,0.341467211508268,0.972426868273176,1.25767897576789,0.551530525350042,0.888986911206461,0.824140228955577,0.64183841918363,1.01078884705519,0.760437899670719,0.565879024158229,0.561849044819294,1.21647789569252,0.516919220600519,1.42888107384922,0.347652977834566,1.73618298417335,0.412085900803307,0.294397840268795,0.685738504770831,1.06485483695602,0.476872379894642,0.290692833264657,0.846984423737976,0.761531471025089,1.28049581010941,1.31534855718921,0.407412341537585,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,0.154936841185966,1.15743966588685,1.74867404556562,1.16965804222704,1.50409737833809,0.382576664137687,0,0.927471342481686
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.725827286159344,1.4850653216486,0.841299845405528,3.42781181284564,2.65042249141936,1.10241719293459,0.670918297127655,0,27.5289702498472,38.3062014255563,28.1099955858926,0.395658863190582,0.731901148819277,1.56274011167028,12.5632349550621,6.19038871034848,8.55670187550137,4.41942878210502,3.84403538157578,2.79599168737951,0.302904773332736,1.81371744256285,0.869593466105033,0.860423876981386,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0,0.461230994512117,0.301445281105245,0.470354828542819,0,0.247194967734374,0.722996784599558,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,28.9852989041432,23.2485844562935,0,0,1.19980546198682,0,13.9305294646485,31.5675415944852,2.26177833803156,26.0736480288415,22.7586757023994,28.2591740601002,26.120843353909,0.611036183101898,0.248813941220186,0.505445516867349,0.841767423545896,0,0.229902104433473,0.360124259610698,0.60281927134286,0.136072998302656,0.768682321709099,0.281105173679186,2.06962696591213,0,0.189106080167819,0,0.219195732427575,0.556094498451196,1.39300866608867,0.61734640922383,0,0,0,0.284163499395593,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.350296027101508,0.658239399653922,0.492502392237286,0.324275238183423,0.146199987425332,0.439100230582101,0.402619256281115,22.9216043934899,1.54356918568927,0,0,0.426576501070468,0.232236671860439,0,0.403367049246685,0.444756087689741,0.190225626112559,0.949058123089023,0.164698954724011,0,0.397912944082302,0.779856348476481,1.79763881730844,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,0.701358198903186,0.252946148497029,0.295220295959204,0,0,0.296452627087149,0.333690211432188,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0,0.312037673114561,0,0.179397413521912,0.964887042726734,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,10.9174401191699,10.9006868530749,0,0.252470927204373,1.26203287766503,1.17131623288992,0.861693590931196,0.238968797952552,0,0.283076530788832,0,0.876767573733936,1.58115111178609,10.9249247583414,0.425820255624806,0,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0.307435147943927,0.775284879504663,0,0.712994756769443,0.632073515871632,1.05418608574999,0,1.02131881726136,0,0.388076051348264,0,0,0.535106452806212,0.822745103010605,1.522324745573,0,0,0,0.16488625294148,0.807322133479528,0.904693873922338,0.238744688006273,0.656563598980245,1.45740418314925,14.8340241608408,0,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.743881101528023,0.523511883968059,0.90730481304255,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0,0,0,0,0,1.35232715822533,0.187682475451182,0,0.214368379079066,0,23.7195773899168,19.7939851698086,23.4887160510153,15.8104927756193,28.773465830367,27.9495742034189,22.2757425076496,27.0192721934532,32.6262534468627,29.5123377698537,0.31136204275253,0.399024873401031,0.341467211508268,0.972426868273176,1.25767897576789,0.551530525350042,0.888986911206461,0.824140228955577,0.64183841918363,1.01078884705519,0.760437899670719,0.565879024158229,0.561849044819294,1.21647789569252,0.516919220600519,1.42888107384922,0.347652977834566,1.73618298417335,0.412085900803307,0.294397840268795,0.685738504770831,1.06485483695602,0.476872379894642,0.290692833264657,0.846984423737976,0.761531471025089,1.28049581010941,1.31534855718921,0.407412341537585,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,0.154936841185966,1.15743966588685,1.74867404556562,1.16965804222704,1.50409737833809,0.382576664137687,0,0.927471342481686
|short_description=p3@Rgs7bp
}}
}}

Latest revision as of 01:58, 27 September 2015

Short description:p3@Rgs7bp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rgs7bp_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 108bp_to_ENSMUST00000063551, NM_029879, uc007rtp.1_5end
EntrezGene:Rgs7bp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rgs7bp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F338.31
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.11
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B228.99
cerebellum, neonate N30.CNhs11135.1395-42I223.25
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.93
corpus striatum, adult.CNhs10487.19-21D831.57
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D526.07
cortex, neonate N30.CNhs11107.1392-42F222.76
diencephalon, adult.CNhs10482.20-12F228.26
diencephalon, neonate N30.CNhs11201.1388-42B226.12
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E822.92
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.92
medulla oblongata, neonate N30.CNhs11200.1396-42A310.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C914.83
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.95
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.02
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A832.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A929.51
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.01e-1323
neuroblast (sensu Vertebrata)2.01e-1323
neuron2.66e-1133
neuronal stem cell2.66e-1133
neuroblast2.66e-1133
electrically signaling cell2.66e-1133
electrically responsive cell9.73e-0939
electrically active cell9.73e-0939
neural cell2.06e-0843
ectodermal cell4.25e-0844
neurectodermal cell4.25e-0844

Uber anatomy
Ontology termp-valuen
nervous system2.77e-3275
central nervous system7.37e-3273
regional part of nervous system2.33e-3154
neural tube1.96e-2852
neural rod1.96e-2852
future spinal cord1.96e-2852
neural keel1.96e-2852
neurectoderm3.67e-2564
neural plate3.67e-2564
presumptive neural plate3.67e-2564
ectoderm-derived structure6.74e-2495
ectoderm6.74e-2495
presumptive ectoderm6.74e-2495
gray matter2.59e-2334
brain5.44e-2347
future brain5.44e-2347
regional part of brain7.10e-2246
ecto-epithelium1.31e-2073
anterior neural tube1.24e-1840
brain grey matter6.43e-1829
regional part of telencephalon6.43e-1829
telencephalon6.43e-1829
regional part of forebrain1.51e-1739
forebrain1.51e-1739
future forebrain1.51e-1739
occipital lobe3.65e-1510
visual cortex3.65e-1510
neocortex3.65e-1510
pre-chordal neural plate4.80e-1549
structure with developmental contribution from neural crest5.41e-1492
cerebral cortex4.27e-1321
cerebral hemisphere4.27e-1321
pallium4.27e-1321
regional part of cerebral cortex8.34e-1317
posterior neural tube1.46e-1012
chordal neural plate1.46e-1012
spinal cord3.98e-086
dorsal region element3.98e-086
dorsum3.98e-086
tube2.69e-07114
regional part of spinal cord6.53e-075
gray matter of spinal cord6.53e-075
anatomical conduit9.37e-07122
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