FFCP PHASE1:Mm9::chr18:16966962..16967025,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12558 | |EntrezGene=12558 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1713 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000152779_5end | |association_with_transcript=0bp_to_ENSMUST00000152779_5end | ||
|cluster_id=chr18:16966962..16967025,- | |||
|description=CAGE_peak_1_at_Cdh2_5end | |description=CAGE_peak_1_at_Cdh2_5end | ||
|id=chr18:16966962..16967025,- | |id=chr18:16966962..16967025,- | ||
|ontology_enrichment_celltype=CL:0000055!5.03e-17!50;CL:0002319!5.23e-15!43;CL:0000221!7.42e-15!44;CL:0000133!7.42e-15!44;CL:0000393!2.35e-13!39;CL:0000211!2.35e-13!39;CL:0000540!9.52e-12!33;CL:0000047!9.52e-12!33;CL:0000031!9.52e-12!33;CL:0000404!9.52e-12!33;CL:0002321!3.94e-08!70;CL:0000220!3.94e-08!70;CL:0000117!2.59e-07!23;CL:0000337!2.59e-07!23 | |ontology_enrichment_celltype=CL:0000055!5.03e-17!50;CL:0002319!5.23e-15!43;CL:0000221!7.42e-15!44;CL:0000133!7.42e-15!44;CL:0000393!2.35e-13!39;CL:0000211!2.35e-13!39;CL:0000540!9.52e-12!33;CL:0000047!9.52e-12!33;CL:0000031!9.52e-12!33;CL:0000404!9.52e-12!33;CL:0002321!3.94e-08!70;CL:0000220!3.94e-08!70;CL:0000117!2.59e-07!23;CL:0000337!2.59e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.62e-15,43;CL:0000221,6.56e-15,44;CL:0000133,6.56e-15,44;CL:0000393,2.11e-13,39;CL:0000211,2.11e-13,39;CL:0000540,8.66e-12,33;CL:0000047,8.66e-12,33;CL:0000031,8.66e-12,33;CL:0000404,8.66e-12,33;CL:0002321,3.80e-08,70;CL:0000117,2.46e-07,23;CL:0000337,2.46e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!8.39e-25!114;UBERON:0004111!2.15e-21!122;UBERON:0000073!1.05e-20!75;UBERON:0001016!1.05e-20!75;UBERON:0001017!6.34e-20!73;UBERON:0005743!6.34e-20!73;UBERON:0004121!5.67e-18!102;UBERON:0000924!5.67e-18!102;UBERON:0006601!5.67e-18!102;UBERON:0002346!6.44e-16!71;UBERON:0003075!6.44e-16!71;UBERON:0007284!6.44e-16!71;UBERON:0003914!1.86e-14!47;UBERON:0003056!2.71e-13!49;UBERON:0000033!5.44e-13!63;UBERON:0007100!2.39e-12!18;UBERON:0000948!2.39e-12!18;UBERON:0005498!2.39e-12!18;UBERON:0004140!2.39e-12!18;UBERON:0009881!2.39e-12!18;UBERON:0004141!2.39e-12!18;UBERON:0003084!2.39e-12!18;UBERON:0007005!2.39e-12!18;UBERON:0004139!2.39e-12!18;UBERON:0004291!2.39e-12!18;UBERON:0001049!5.25e-12!52;UBERON:0005068!5.25e-12!52;UBERON:0006241!5.25e-12!52;UBERON:0007135!5.25e-12!52;UBERON:0000955!1.79e-11!50;UBERON:0006238!1.79e-11!50;UBERON:0002616!2.79e-11!49;UBERON:0004535!4.77e-11!23;UBERON:0001009!4.77e-11!23;UBERON:0003080!2.23e-10!40;UBERON:0002780!4.10e-10!39;UBERON:0001890!4.10e-10!39;UBERON:0006240!4.10e-10!39;UBERON:0000477!6.13e-09!154;UBERON:0000119!8.12e-09!183;UBERON:0000468!1.28e-08!333;UBERON:0000483!2.00e-08!181;UBERON:0002020!2.39e-08!34;UBERON:0002791!1.35e-07!29;UBERON:0003528!1.35e-07!29;UBERON:0001893!1.35e-07!29;UBERON:0000922!3.78e-07!328;UBERON:0000010!6.38e-07!11 | |ontology_enrichment_uberon=UBERON:0000025!8.39e-25!114;UBERON:0004111!2.15e-21!122;UBERON:0000073!1.05e-20!75;UBERON:0001016!1.05e-20!75;UBERON:0001017!6.34e-20!73;UBERON:0005743!6.34e-20!73;UBERON:0004121!5.67e-18!102;UBERON:0000924!5.67e-18!102;UBERON:0006601!5.67e-18!102;UBERON:0002346!6.44e-16!71;UBERON:0003075!6.44e-16!71;UBERON:0007284!6.44e-16!71;UBERON:0003914!1.86e-14!47;UBERON:0003056!2.71e-13!49;UBERON:0000033!5.44e-13!63;UBERON:0007100!2.39e-12!18;UBERON:0000948!2.39e-12!18;UBERON:0005498!2.39e-12!18;UBERON:0004140!2.39e-12!18;UBERON:0009881!2.39e-12!18;UBERON:0004141!2.39e-12!18;UBERON:0003084!2.39e-12!18;UBERON:0007005!2.39e-12!18;UBERON:0004139!2.39e-12!18;UBERON:0004291!2.39e-12!18;UBERON:0001049!5.25e-12!52;UBERON:0005068!5.25e-12!52;UBERON:0006241!5.25e-12!52;UBERON:0007135!5.25e-12!52;UBERON:0000955!1.79e-11!50;UBERON:0006238!1.79e-11!50;UBERON:0002616!2.79e-11!49;UBERON:0004535!4.77e-11!23;UBERON:0001009!4.77e-11!23;UBERON:0003080!2.23e-10!40;UBERON:0002780!4.10e-10!39;UBERON:0001890!4.10e-10!39;UBERON:0006240!4.10e-10!39;UBERON:0000477!6.13e-09!154;UBERON:0000119!8.12e-09!183;UBERON:0000468!1.28e-08!333;UBERON:0000483!2.00e-08!181;UBERON:0002020!2.39e-08!34;UBERON:0002791!1.35e-07!29;UBERON:0003528!1.35e-07!29;UBERON:0001893!1.35e-07!29;UBERON:0000922!3.78e-07!328;UBERON:0000010!6.38e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.31e-26,92;UBERON:0000025,8.26e-25,114;UBERON:0004111,2.72e-21,122;UBERON:0001016,8.79e-21,75;UBERON:0001017,5.34e-20,73;UBERON:0004121,1.72e-18,95;UBERON:0000924,1.72e-18,95;UBERON:0006601,1.72e-18,95;UBERON:0002346,8.01e-17,64;UBERON:0003075,8.01e-17,64;UBERON:0007284,8.01e-17,64;UBERON:0003914,2.03e-14,47;UBERON:0003056,2.43e-13,49;UBERON:0010371,6.43e-13,73;UBERON:0007100,2.16e-12,18;UBERON:0000948,2.16e-12,18;UBERON:0005498,2.16e-12,18;UBERON:0004140,2.16e-12,18;UBERON:0009881,2.16e-12,18;UBERON:0004141,2.16e-12,18;UBERON:0003084,2.16e-12,18;UBERON:0007005,2.16e-12,18;UBERON:0004139,2.16e-12,18;UBERON:0004291,2.16e-12,18;UBERON:0000073,3.53e-12,54;UBERON:0001049,4.77e-12,52;UBERON:0005068,4.77e-12,52;UBERON:0006241,4.77e-12,52;UBERON:0007135,4.77e-12,52;UBERON:0000955,3.79e-11,47;UBERON:0006238,3.79e-11,47;UBERON:0004535,4.37e-11,23;UBERON:0001009,4.37e-11,23;UBERON:0002616,5.89e-11,46;UBERON:0003080,2.05e-10,40;UBERON:0002780,3.79e-10,39;UBERON:0001890,3.79e-10,39;UBERON:0006240,3.79e-10,39;UBERON:0000119,1.21e-08,176;UBERON:0002020,2.24e-08,34;UBERON:0000483,2.94e-08,174;UBERON:0003528,1.28e-07,29;UBERON:0002791,1.28e-07,29;UBERON:0001893,1.28e-07,29;UBERON:0000922,1.87e-07,320;UBERON:0000010,6.07e-07,11 | |||
|phase1_expression=19.6983081938897,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,9.95006494767516,0.397163804803541,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1721890513108,21.3905324873176,48.6398893228456,14.8654355426127,187.283609330804,195.960074999149,238.176626365997,89.0313641537306,156.690295157819,0,0,0,292.503978772872,151.289656287664,177.39119974344,121.996825898337,102.624249978774,123.597123683705,45.4051672972637,33.7932022522233,1.7997994345628,4.94433181283487,0.7104801149461,27.5632101676932,47.6430698598728,191.722093158375,161.062084429707,172.04581838543,29.136400409188,27.8294361599033,128.247866778057,144.726661237537,131.448286485233,25.3266526298594,45.0736303440713,40.398518246392,130.699311140622,122.593442427229,106.266327593579,25.1264699101243,29.826418331679,28.5732723342635,47.7298308467342,45.4165661749138,99.5373040707105,59.2936093798831,63.0266811290591,6.95674772884027,48.1837371109576,57.7975633651588,87.4319170453264,125.4068485674,117.831071306599,29.7742170679314,23.8602451609281,17.6654483129951,14.1335829804136,26.901093177346,20.5322363862909,15.2883143823987,7.11066703153331,0.216491041011214,0.506719730950197,0.505524445014783,40.6494611799854,15.2773351351831,17.3677302705845,35.9114626405901,28.3152894830291,20.9860102503013,18.5388847879726,23.0473865985981,18.3473223341326,3.21353458054686,41.7892141498545,11.4999371753484,31.5445357397448,28.2677143629304,45.5782737947109,1.86391761218122,29.5708604981663,27.0186251789357,1.02182822083437,0,0,0,46.5848888548999,26.5350349634803,62.7015217043193,40.5010666048004,41.1701886301832,42.5965491347098,41.533763345346,6.00852246716866,27.8671614166608,0.252722758433675,10.7325346502102,76.1204591331817,87.1328975802862,110.918271960095,106.699011027686,149.952444129527,144.256049040741,132.587940252016,47.3427168452399,38.1555347491131,40.0904889955777,38.5332961919048,19.070028721199,11.9560317167007,16.0195996600197,9.4659782747654,25.0783176191301,0,0,0,129.039356289618,135.321536609093,142.789214738585,172.113422770448,187.516312855276,153.495777322941,178.121001678812,168.74396948036,249.17724061154,207.345410890985,215.387712871773,250.502621496694,219.8847810877,203.962057105386,198.759706184111,32.8052319760039,102.287184705009,0.330418782983798,1.05780226665418,42.4443618565116,40.6414175755767,21.9074684247559,13.5127961497639,9.11749979763968,11.9842144450912,1.89811624617805,10.2113351928887,8.54539709920916,6.96347652144028,3.8992817423824,0.898819408654221,1.51296634912286,2.38969527905241,24.8464950248537,33.4748141946505,31.5581659884625,26.2710212920455,17.2617713579187,12.1334968410251,3.85742876457969,4.42830443938806,4.55296310739987,4.68909222902842,106.426493124286,29.1978935003165,31.4494392181125,22.7110733508702,29.4147176013329,36.9001054421198,36.6661226565245,41.1405476554659,32.9134510353322,55.4614054639925,172.521847832825,81.8710084870707,100.164093069774,128.56264887508,88.4429248663027,99.865808922217,4.0645701836653,47.9413271779326,31.778170406195,23.9340570943015,14.7854856421756,14.4055381399962,10.9500074807566,9.36641509717434,21.5960147425482,20.3747514476873,20.2507556195009,10.4872521418072,8.80693407516067,5.49666422609744,0,0,1.96705709207614,2.48343071674259,39.0137933670334,39.1487033217959,15.7377547561608,6.05930225290495,163.748765877037,173.745241212004,174.7083755613,169.906815344264,138.135177931084,149.181331725715,158.280984354884,147.881464103124,157.324535622716,39.8438432363041,15.4714692877013,15.1355763117167,14.985600260529,3.95928295134085,1.32745138339963,13.352934988524,7.86041248108353,3.58349651536206,6.496641643377,8.60818414242997,10.5955600198971,5.81653967164009,9.9819265947722,4.42451461110142,2.10837217149998,4.12542172992747,29.6182457005796,110.917633923287,102.193360188376,82.3054214521314,61.8917415411535,43.8787291301094,48.8710591188299,38.0581186393249,2.11204537257339,2.1183207086382,2.64634077665954,3.79238381765404,5.32832608096488,4.28221766989907,1.43246812803764,1.64140899745061,2.62332752966866,43.3895206704593,0.341741761595705,23.7344898157706,8.33375373163703,2.0720530270516,0.820165366326151,1.14389086603261,0,0,0,0,48.7157430114948,22.9750997853339,13.9326889660124,10.0362382086945,7.42432716737004,8.36158947585888,16.8613049679685,3.14107130380836,1.8146096260851,1.24267862617385,1.12738587736838,19.8857006238492,14.0639716888533,7.77804753376191,7.62042958518613,7.94093789806657,10.9142231940551,13.2808472540829,23.9079305290621,11.5960377996483,10.0810502190253,1.89606672376907,9.32535990334755,5.03283690107653,2.07873316764472,1.61124026100733,1.19208812868759,0.841368146639782,1.18151621739662,1.11063094942962,0.685861259894999,0.705783295957884,0.682205165178267,0.384847366561318,0.935015217452552,1.81384306892169,1.77588762699252,3.13998498133165,2.68615386182526,4.44336066274038,2.25218970541418,5.67770035228522,1.71494703263253,0.501572104035363,40.0973808258117,28.0798394269378,36.6653128601214,29.730600545458,30.8287133896789,27.1941803060292,33.0761025113585,32.8734478353681,43.9548136714678,34.6899408873719,30.6172675373321,66.2381289845711,58.2201595621598,38.1677545797222,23.89590053959,15.6266982182512,36.4484633594649,25.7543821548618,37.2266283126506,32.3452431057661,29.4035987872678,33.0096097425633,32.2126785696396,31.0521989163616,34.6335877802348,24.2909782554368,30.9411150272764,36.4598426676403,29.2580989570348,29.8813807872827,28.8010172003749,33.7204031702741,38.626662771466,34.5924471584942,31.8089705803817,35.5381353145041,31.4636113341169,28.411528835287,32.5929873230068,30.8628249411756,36.776855618494,33.8855419371938,24.1446315470117,31.762052443123,27.3927387593221,54.4587059904722,26.2003401458857,31.8009159991481,16.6420848899894,21.838550492832,22.4911800551809 | |phase1_expression=19.6983081938897,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,9.95006494767516,0.397163804803541,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1721890513108,21.3905324873176,48.6398893228456,14.8654355426127,187.283609330804,195.960074999149,238.176626365997,89.0313641537306,156.690295157819,0,0,0,292.503978772872,151.289656287664,177.39119974344,121.996825898337,102.624249978774,123.597123683705,45.4051672972637,33.7932022522233,1.7997994345628,4.94433181283487,0.7104801149461,27.5632101676932,47.6430698598728,191.722093158375,161.062084429707,172.04581838543,29.136400409188,27.8294361599033,128.247866778057,144.726661237537,131.448286485233,25.3266526298594,45.0736303440713,40.398518246392,130.699311140622,122.593442427229,106.266327593579,25.1264699101243,29.826418331679,28.5732723342635,47.7298308467342,45.4165661749138,99.5373040707105,59.2936093798831,63.0266811290591,6.95674772884027,48.1837371109576,57.7975633651588,87.4319170453264,125.4068485674,117.831071306599,29.7742170679314,23.8602451609281,17.6654483129951,14.1335829804136,26.901093177346,20.5322363862909,15.2883143823987,7.11066703153331,0.216491041011214,0.506719730950197,0.505524445014783,40.6494611799854,15.2773351351831,17.3677302705845,35.9114626405901,28.3152894830291,20.9860102503013,18.5388847879726,23.0473865985981,18.3473223341326,3.21353458054686,41.7892141498545,11.4999371753484,31.5445357397448,28.2677143629304,45.5782737947109,1.86391761218122,29.5708604981663,27.0186251789357,1.02182822083437,0,0,0,46.5848888548999,26.5350349634803,62.7015217043193,40.5010666048004,41.1701886301832,42.5965491347098,41.533763345346,6.00852246716866,27.8671614166608,0.252722758433675,10.7325346502102,76.1204591331817,87.1328975802862,110.918271960095,106.699011027686,149.952444129527,144.256049040741,132.587940252016,47.3427168452399,38.1555347491131,40.0904889955777,38.5332961919048,19.070028721199,11.9560317167007,16.0195996600197,9.4659782747654,25.0783176191301,0,0,0,129.039356289618,135.321536609093,142.789214738585,172.113422770448,187.516312855276,153.495777322941,178.121001678812,168.74396948036,249.17724061154,207.345410890985,215.387712871773,250.502621496694,219.8847810877,203.962057105386,198.759706184111,32.8052319760039,102.287184705009,0.330418782983798,1.05780226665418,42.4443618565116,40.6414175755767,21.9074684247559,13.5127961497639,9.11749979763968,11.9842144450912,1.89811624617805,10.2113351928887,8.54539709920916,6.96347652144028,3.8992817423824,0.898819408654221,1.51296634912286,2.38969527905241,24.8464950248537,33.4748141946505,31.5581659884625,26.2710212920455,17.2617713579187,12.1334968410251,3.85742876457969,4.42830443938806,4.55296310739987,4.68909222902842,106.426493124286,29.1978935003165,31.4494392181125,22.7110733508702,29.4147176013329,36.9001054421198,36.6661226565245,41.1405476554659,32.9134510353322,55.4614054639925,172.521847832825,81.8710084870707,100.164093069774,128.56264887508,88.4429248663027,99.865808922217,4.0645701836653,47.9413271779326,31.778170406195,23.9340570943015,14.7854856421756,14.4055381399962,10.9500074807566,9.36641509717434,21.5960147425482,20.3747514476873,20.2507556195009,10.4872521418072,8.80693407516067,5.49666422609744,0,0,1.96705709207614,2.48343071674259,39.0137933670334,39.1487033217959,15.7377547561608,6.05930225290495,163.748765877037,173.745241212004,174.7083755613,169.906815344264,138.135177931084,149.181331725715,158.280984354884,147.881464103124,157.324535622716,39.8438432363041,15.4714692877013,15.1355763117167,14.985600260529,3.95928295134085,1.32745138339963,13.352934988524,7.86041248108353,3.58349651536206,6.496641643377,8.60818414242997,10.5955600198971,5.81653967164009,9.9819265947722,4.42451461110142,2.10837217149998,4.12542172992747,29.6182457005796,110.917633923287,102.193360188376,82.3054214521314,61.8917415411535,43.8787291301094,48.8710591188299,38.0581186393249,2.11204537257339,2.1183207086382,2.64634077665954,3.79238381765404,5.32832608096488,4.28221766989907,1.43246812803764,1.64140899745061,2.62332752966866,43.3895206704593,0.341741761595705,23.7344898157706,8.33375373163703,2.0720530270516,0.820165366326151,1.14389086603261,0,0,0,0,48.7157430114948,22.9750997853339,13.9326889660124,10.0362382086945,7.42432716737004,8.36158947585888,16.8613049679685,3.14107130380836,1.8146096260851,1.24267862617385,1.12738587736838,19.8857006238492,14.0639716888533,7.77804753376191,7.62042958518613,7.94093789806657,10.9142231940551,13.2808472540829,23.9079305290621,11.5960377996483,10.0810502190253,1.89606672376907,9.32535990334755,5.03283690107653,2.07873316764472,1.61124026100733,1.19208812868759,0.841368146639782,1.18151621739662,1.11063094942962,0.685861259894999,0.705783295957884,0.682205165178267,0.384847366561318,0.935015217452552,1.81384306892169,1.77588762699252,3.13998498133165,2.68615386182526,4.44336066274038,2.25218970541418,5.67770035228522,1.71494703263253,0.501572104035363,40.0973808258117,28.0798394269378,36.6653128601214,29.730600545458,30.8287133896789,27.1941803060292,33.0761025113585,32.8734478353681,43.9548136714678,34.6899408873719,30.6172675373321,66.2381289845711,58.2201595621598,38.1677545797222,23.89590053959,15.6266982182512,36.4484633594649,25.7543821548618,37.2266283126506,32.3452431057661,29.4035987872678,33.0096097425633,32.2126785696396,31.0521989163616,34.6335877802348,24.2909782554368,30.9411150272764,36.4598426676403,29.2580989570348,29.8813807872827,28.8010172003749,33.7204031702741,38.626662771466,34.5924471584942,31.8089705803817,35.5381353145041,31.4636113341169,28.411528835287,32.5929873230068,30.8628249411756,36.776855618494,33.8855419371938,24.1446315470117,31.762052443123,27.3927387593221,54.4587059904722,26.2003401458857,31.8009159991481,16.6420848899894,21.838550492832,22.4911800551809 | ||
|short_description=p1@Cdh2 | |short_description=p1@Cdh2 | ||
}} | }} |
Latest revision as of 02:00, 27 September 2015
Short description: | p1@Cdh2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdh2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1713 |
Association with transcript: | 0bp_to_ENSMUST00000152779_5end |
EntrezGene: | Cdh2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.62e-15 | 43 |
ectodermal cell | 6.56e-15 | 44 |
neurectodermal cell | 6.56e-15 | 44 |
electrically responsive cell | 2.11e-13 | 39 |
electrically active cell | 2.11e-13 | 39 |
neuron | 8.66e-12 | 33 |
neuronal stem cell | 8.66e-12 | 33 |
neuroblast | 8.66e-12 | 33 |
electrically signaling cell | 8.66e-12 | 33 |
embryonic cell | 3.80e-08 | 70 |
CNS neuron (sensu Vertebrata) | 2.46e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.46e-07 | 23 |