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FFCP PHASE1:Mm9::chr18:16966962..16967025,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12558
|EntrezGene=12558
|HGNC=
|HGNC=
|MCL_coexpression_id=1713
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000152779_5end
|association_with_transcript=0bp_to_ENSMUST00000152779_5end
|cluster_id=chr18:16966962..16967025,-
|description=CAGE_peak_1_at_Cdh2_5end
|description=CAGE_peak_1_at_Cdh2_5end
|id=chr18:16966962..16967025,-
|id=chr18:16966962..16967025,-
|ontology_enrichment_celltype=CL:0000055!5.03e-17!50;CL:0002319!5.23e-15!43;CL:0000221!7.42e-15!44;CL:0000133!7.42e-15!44;CL:0000393!2.35e-13!39;CL:0000211!2.35e-13!39;CL:0000540!9.52e-12!33;CL:0000047!9.52e-12!33;CL:0000031!9.52e-12!33;CL:0000404!9.52e-12!33;CL:0002321!3.94e-08!70;CL:0000220!3.94e-08!70;CL:0000117!2.59e-07!23;CL:0000337!2.59e-07!23
|ontology_enrichment_celltype_v019_2=CL:0002319,4.62e-15,43;CL:0000221,6.56e-15,44;CL:0000133,6.56e-15,44;CL:0000393,2.11e-13,39;CL:0000211,2.11e-13,39;CL:0000540,8.66e-12,33;CL:0000047,8.66e-12,33;CL:0000031,8.66e-12,33;CL:0000404,8.66e-12,33;CL:0002321,3.80e-08,70;CL:0000117,2.46e-07,23;CL:0000337,2.46e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!8.39e-25!114;UBERON:0004111!2.15e-21!122;UBERON:0000073!1.05e-20!75;UBERON:0001016!1.05e-20!75;UBERON:0001017!6.34e-20!73;UBERON:0005743!6.34e-20!73;UBERON:0004121!5.67e-18!102;UBERON:0000924!5.67e-18!102;UBERON:0006601!5.67e-18!102;UBERON:0002346!6.44e-16!71;UBERON:0003075!6.44e-16!71;UBERON:0007284!6.44e-16!71;UBERON:0003914!1.86e-14!47;UBERON:0003056!2.71e-13!49;UBERON:0000033!5.44e-13!63;UBERON:0007100!2.39e-12!18;UBERON:0000948!2.39e-12!18;UBERON:0005498!2.39e-12!18;UBERON:0004140!2.39e-12!18;UBERON:0009881!2.39e-12!18;UBERON:0004141!2.39e-12!18;UBERON:0003084!2.39e-12!18;UBERON:0007005!2.39e-12!18;UBERON:0004139!2.39e-12!18;UBERON:0004291!2.39e-12!18;UBERON:0001049!5.25e-12!52;UBERON:0005068!5.25e-12!52;UBERON:0006241!5.25e-12!52;UBERON:0007135!5.25e-12!52;UBERON:0000955!1.79e-11!50;UBERON:0006238!1.79e-11!50;UBERON:0002616!2.79e-11!49;UBERON:0004535!4.77e-11!23;UBERON:0001009!4.77e-11!23;UBERON:0003080!2.23e-10!40;UBERON:0002780!4.10e-10!39;UBERON:0001890!4.10e-10!39;UBERON:0006240!4.10e-10!39;UBERON:0000477!6.13e-09!154;UBERON:0000119!8.12e-09!183;UBERON:0000468!1.28e-08!333;UBERON:0000483!2.00e-08!181;UBERON:0002020!2.39e-08!34;UBERON:0002791!1.35e-07!29;UBERON:0003528!1.35e-07!29;UBERON:0001893!1.35e-07!29;UBERON:0000922!3.78e-07!328;UBERON:0000010!6.38e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.31e-26,92;UBERON:0000025,8.26e-25,114;UBERON:0004111,2.72e-21,122;UBERON:0001016,8.79e-21,75;UBERON:0001017,5.34e-20,73;UBERON:0004121,1.72e-18,95;UBERON:0000924,1.72e-18,95;UBERON:0006601,1.72e-18,95;UBERON:0002346,8.01e-17,64;UBERON:0003075,8.01e-17,64;UBERON:0007284,8.01e-17,64;UBERON:0003914,2.03e-14,47;UBERON:0003056,2.43e-13,49;UBERON:0010371,6.43e-13,73;UBERON:0007100,2.16e-12,18;UBERON:0000948,2.16e-12,18;UBERON:0005498,2.16e-12,18;UBERON:0004140,2.16e-12,18;UBERON:0009881,2.16e-12,18;UBERON:0004141,2.16e-12,18;UBERON:0003084,2.16e-12,18;UBERON:0007005,2.16e-12,18;UBERON:0004139,2.16e-12,18;UBERON:0004291,2.16e-12,18;UBERON:0000073,3.53e-12,54;UBERON:0001049,4.77e-12,52;UBERON:0005068,4.77e-12,52;UBERON:0006241,4.77e-12,52;UBERON:0007135,4.77e-12,52;UBERON:0000955,3.79e-11,47;UBERON:0006238,3.79e-11,47;UBERON:0004535,4.37e-11,23;UBERON:0001009,4.37e-11,23;UBERON:0002616,5.89e-11,46;UBERON:0003080,2.05e-10,40;UBERON:0002780,3.79e-10,39;UBERON:0001890,3.79e-10,39;UBERON:0006240,3.79e-10,39;UBERON:0000119,1.21e-08,176;UBERON:0002020,2.24e-08,34;UBERON:0000483,2.94e-08,174;UBERON:0003528,1.28e-07,29;UBERON:0002791,1.28e-07,29;UBERON:0001893,1.28e-07,29;UBERON:0000922,1.87e-07,320;UBERON:0000010,6.07e-07,11
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17,28.0798394269378,36.6653128601214,29.730600545458,30.8287133896789,27.1941803060292,33.0761025113585,32.8734478353681,43.9548136714678,34.6899408873719,30.6172675373321,66.2381289845711,58.2201595621598,38.1677545797222,23.89590053959,15.6266982182512,36.4484633594649,25.7543821548618,37.2266283126506,32.3452431057661,29.4035987872678,33.0096097425633,32.2126785696396,31.0521989163616,34.6335877802348,24.2909782554368,30.9411150272764,36.4598426676403,29.2580989570348,29.8813807872827,28.8010172003749,33.7204031702741,38.626662771466,34.5924471584942,31.8089705803817,35.5381353145041,31.4636113341169,28.411528835287,32.5929873230068,30.8628249411756,36.776855618494,33.8855419371938,24.1446315470117,31.762052443123,27.3927387593221,54.4587059904722,26.2003401458857,31.8009159991481,16.6420848899894,21.838550492832,22.4911800551809
|phase1_expression=19.6983081938897,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,9.95006494767516,0.397163804803541,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1721890513108,21.3905324873176,48.6398893228456,14.8654355426127,187.283609330804,195.960074999149,238.176626365997,89.0313641537306,156.690295157819,0,0,0,292.503978772872,151.289656287664,177.39119974344,121.996825898337,102.624249978774,123.597123683705,45.4051672972637,33.7932022522233,1.7997994345628,4.94433181283487,0.7104801149461,27.5632101676932,47.6430698598728,191.722093158375,161.062084429707,172.04581838543,29.136400409188,27.8294361599033,128.247866778057,144.726661237537,131.448286485233,25.3266526298594,45.0736303440713,40.398518246392,130.699311140622,122.593442427229,106.266327593579,25.1264699101243,29.826418331679,28.5732723342635,47.7298308467342,45.4165661749138,99.5373040707105,59.2936093798831,63.0266811290591,6.95674772884027,48.1837371109576,57.7975633651588,87.4319170453264,125.4068485674,117.831071306599,29.7742170679314,23.8602451609281,17.6654483129951,14.1335829804136,26.901093177346,20.5322363862909,15.2883143823987,7.11066703153331,0.216491041011214,0.506719730950197,0.505524445014783,40.6494611799854,15.2773351351831,17.3677302705845,35.9114626405901,28.3152894830291,20.9860102503013,18.5388847879726,23.0473865985981,18.3473223341326,3.21353458054686,41.7892141498545,11.4999371753484,31.5445357397448,28.2677143629304,45.5782737947109,1.86391761218122,29.5708604981663,27.0186251789357,1.02182822083437,0,0,0,46.5848888548999,26.5350349634803,62.7015217043193,40.5010666048004,41.1701886301832,42.5965491347098,41.533763345346,6.00852246716866,27.8671614166608,0.252722758433675,10.7325346502102,76.1204591331817,87.1328975802862,110.918271960095,106.699011027686,149.952444129527,144.256049040741,132.587940252016,47.3427168452399,38.1555347491131,40.0904889955777,38.5332961919048,19.070028721199,11.9560317167007,16.0195996600197,9.4659782747654,25.0783176191301,0,0,0,129.039356289618,135.321536609093,142.789214738585,172.113422770448,187.516312855276,153.495777322941,178.121001678812,168.74396948036,249.17724061154,207.345410890985,215.387712871773,250.502621496694,219.8847810877,203.962057105386,198.759706184111,32.8052319760039,102.287184705009,0.330418782983798,1.05780226665418,42.4443618565116,40.6414175755767,21.9074684247559,13.5127961497639,9.11749979763968,11.9842144450912,1.89811624617805,10.2113351928887,8.54539709920916,6.96347652144028,3.8992817423824,0.898819408654221,1.51296634912286,2.38969527905241,24.8464950248537,33.4748141946505,31.5581659884625,26.2710212920455,17.2617713579187,12.1334968410251,3.85742876457969,4.42830443938806,4.55296310739987,4.68909222902842,106.426493124286,29.1978935003165,31.4494392181125,22.7110733508702,29.4147176013329,36.9001054421198,36.6661226565245,41.1405476554659,32.9134510353322,55.4614054639925,172.521847832825,81.8710084870707,100.164093069774,128.56264887508,88.4429248663027,99.865808922217,4.0645701836653,47.9413271779326,31.778170406195,23.9340570943015,14.7854856421756,14.4055381399962,10.9500074807566,9.36641509717434,21.5960147425482,20.3747514476873,20.2507556195009,10.4872521418072,8.80693407516067,5.49666422609744,0,0,1.96705709207614,2.48343071674259,39.0137933670334,39.1487033217959,15.7377547561608,6.05930225290495,163.748765877037,173.745241212004,174.7083755613,169.906815344264,138.135177931084,149.181331725715,158.280984354884,147.881464103124,157.324535622716,39.8438432363041,15.4714692877013,15.1355763117167,14.985600260529,3.95928295134085,1.32745138339963,13.352934988524,7.86041248108353,3.58349651536206,6.496641643377,8.60818414242997,10.5955600198971,5.81653967164009,9.9819265947722,4.42451461110142,2.10837217149998,4.12542172992747,29.6182457005796,110.917633923287,102.193360188376,82.3054214521314,61.8917415411535,43.8787291301094,48.8710591188299,38.0581186393249,2.11204537257339,2.1183207086382,2.64634077665954,3.79238381765404,5.32832608096488,4.28221766989907,1.43246812803764,1.64140899745061,2.62332752966866,43.3895206704593,0.341741761595705,23.7344898157706,8.33375373163703,2.0720530270516,0.820165366326151,1.14389086603261,0,0,0,0,48.7157430114948,22.9750997853339,13.9326889660124,10.0362382086945,7.42432716737004,8.36158947585888,16.8613049679685,3.14107130380836,1.8146096260851,1.24267862617385,1.12738587736838,19.8857006238492,14.0639716888533,7.77804753376191,7.62042958518613,7.94093789806657,10.9142231940551,13.2808472540829,23.9079305290621,11.5960377996483,10.0810502190253,1.89606672376907,9.32535990334755,5.03283690107653,2.07873316764472,1.61124026100733,1.19208812868759,0.841368146639782,1.18151621739662,1.11063094942962,0.685861259894999,0.705783295957884,0.682205165178267,0.384847366561318,0.935015217452552,1.81384306892169,1.77588762699252,3.13998498133165,2.68615386182526,4.44336066274038,2.25218970541418,5.67770035228522,1.71494703263253,0.501572104035363,40.0973808258117,28.0798394269378,36.6653128601214,29.730600545458,30.8287133896789,27.1941803060292,33.0761025113585,32.8734478353681,43.9548136714678,34.6899408873719,30.6172675373321,66.2381289845711,58.2201595621598,38.1677545797222,23.89590053959,15.6266982182512,36.4484633594649,25.7543821548618,37.2266283126506,32.3452431057661,29.4035987872678,33.0096097425633,32.2126785696396,31.0521989163616,34.6335877802348,24.2909782554368,30.9411150272764,36.4598426676403,29.2580989570348,29.8813807872827,28.8010172003749,33.7204031702741,38.626662771466,34.5924471584942,31.8089705803817,35.5381353145041,31.4636113341169,28.411528835287,32.5929873230068,30.8628249411756,36.776855618494,33.8855419371938,24.1446315470117,31.762052443123,27.3927387593221,54.4587059904722,26.2003401458857,31.8009159991481,16.6420848899894,21.838550492832,22.4911800551809
|short_description=p1@Cdh2
|short_description=p1@Cdh2
}}
}}

Latest revision as of 02:00, 27 September 2015

Short description:p1@Cdh2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cdh2_5end
Coexpression cluster:MCL_coexpression_mm9:1713
Association with transcript: 0bp_to_ENSMUST00000152779_5end
EntrezGene:Cdh2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cdh2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D921.39
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B348.64
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.87
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2187.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8195.96
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3238.18
Mouse Astrocytes, donor2.CNhs12078.11552-120C489.03
Mouse Astrocytes, donor3.CNhs12107.11633-122C4156.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1292.50
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1151.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5177.39
Mouse Granule cells, donor1.CNhs12131.11713-123C3122.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3102.62
Mouse Granule cells, donor3.CNhs12108.11636-122C7123.60
Mouse Meningeal cells, donor1.CNhs12132.11716-123C645.41
Mouse Meningeal cells, donor3.CNhs12109.11639-122D133.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C827.56
Mouse Microglia, donor2.CNhs12634.11736-123E847.64
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5191.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5161.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9172.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2128.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2144.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6131.45
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F345.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D740.40
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4130.70
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4122.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8106.27
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D647.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F645.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E199.54
Mouse Schwann, donor1.CNhs12507.11728-123D959.29
Mouse Schwann, donor2.CNhs12573.11746-123F963.03
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F748.18
Mouse hepatocyte, donor1.CNhs13078.11714-123C457.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C887.43
Mouse hepatocyte, donor6.CNhs13090.11822-124F4125.41
Mouse hepatocyte, donor8.CNhs13091.11824-124F6117.83
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A729.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I723.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.13
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G626.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B640.65
accessory axillary lymph node, adult.CNhs10475.1063-29H915.28
adrenal gland, adult.CNhs10508.49-24D717.37
adrenal gland, embryo E14.CNhs11038.406-44C535.91
adrenal gland, embryo E16.CNhs11004.1254-43D628.32
adrenal gland, embryo E17.CNhs11043.1263-45I120.99
adrenal gland, embryo E18.CNhs11026.1262-18F518.54
adrenal gland, neonate N00.CNhs11191.1311-23C123.05
adrenal gland, neonate N25.CNhs11223.1377-27I318.35
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H141.79
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F531.54
bone (os femoris), neonate N16.CNhs11225.1525-43A628.27
bone (os femoris), neonate N20.CNhs11195.1350-25C345.58
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B229.57
cerebellum, neonate N30.CNhs11135.1395-42I227.02
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A446.58
corpus striatum, adult.CNhs10487.19-21D826.54
corpus striatum, neonate N00.CNhs11226.630-43F162.70
cortex, adult.CNhs10473.12-14D540.50
cortex, neonate N30.CNhs11107.1392-42F241.17
diencephalon, adult.CNhs10482.20-12F242.60
diencephalon, neonate N30.CNhs11201.1388-42B241.53
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G410.73
eyeball, embryo E12.CNhs11016.345-16C676.12
eyeball, embryo E14.CNhs10521.399-16E287.13
eyeball, embryo E15.CNhs10593.426-16C9110.92
eyeball, embryo E17.CNhs11023.1261-18D4106.70
eyeball, neonate N00.CNhs11207.633-15C6149.95
eyeball, neonate N01.CNhs11140.1532-43E7144.26
eyeball, neonate N02.CNhs11205.1551-44G8132.59
eyeball, neonate N16.CNhs11188.777-19A247.34
forelimb, embryo E11.CNhs10596.335-25E238.16
forelimb, embryo E12.CNhs10600.359-14H240.09
forelimb, embryo E13.CNhs10589.384-1E238.53
forelimb, embryo E14.CNhs10577.413-26A819.07
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C416.02
forelimb, embryo E18.CNhs11008.1520-43B59.47
gonad, embryo E13.CNhs11044.1564-45I625.08
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E9129.04
heart, embryo E12.CNhs11015.353-12F5135.32
heart, embryo E13.CNhs11013.376-3I9142.79
heart, embryo E14.CNhs10597.403-26D4172.11
heart, embryo E15.CNhs11017.431-16C8187.52
heart, embryo E16.CNhs11021.457-17C6153.50
heart, embryo E17.CNhs11025.479-18E5178.12
heart, embryo E18.CNhs11030.1283-20G3168.74
heart, neonate N00.CNhs11213.639-21E3249.18
heart, neonate N03.CNhs11221.1349-25I2207.35
heart, neonate N10.CNhs11118.749-24G1215.39
heart, neonate N16.CNhs11209.782-15G1250.50
heart, neonate N20.CNhs11127.821-26I6219.88
heart, neonate N25.CNhs11196.1351-25D3203.96
heart, neonate N30.CNhs11202.1390-42D2198.76
hippocampus, adult.CNhs10478.13-16E832.81
hippocampus, neonate N00.CNhs11228.627-43G1102.29
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I542.44
intestine, embryo E13.CNhs11010.381-16D540.64
intestine, embryo E15.CNhs10602.976-16D821.91
intestine, embryo E16.CNhs10585.463-22H413.51
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F711.98
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E910.21
intestine, neonate N06.CNhs11102.688-20B88.55
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I924.85
kidney, embryo E15.CNhs10997.434-16F833.47
kidney, embryo E16.CNhs10584.464-22A531.56
kidney, embryo E17.CNhs11028.483-18I226.27
kidney, embryo E18.CNhs11001.1288-20C717.26
kidney, neonate N00.CNhs11214.646-21G712.13
kidney, neonate N10.CNhs11206.758-6D53.86
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H14.69
liver, adult pregnant day01.CNhs10466.508-5B2106.43
liver, embryo E12.CNhs10601.355-15F829.20
liver, embryo E13.CNhs10524.378-3H631.45
liver, embryo E14.CNhs10594.409-16E122.71
liver, embryo E15.CNhs10520.433-16D729.41
liver, embryo E16.CNhs10523.462-17F536.90
liver, embryo E17.CNhs10510.481-18A336.67
liver, embryo E18.CNhs10579.499-43G441.14
liver, neonate N00.CNhs11117.641-24F432.91
liver, neonate N03.CNhs11123.1345-25G255.46
liver, neonate N06.CNhs11101.684-20A8172.52
liver, neonate N07.CNhs11103.716-20H281.87
liver, neonate N10.CNhs11115.751-24B9100.16
liver, neonate N20.CNhs11220.823-25A3128.56
liver, neonate N25.CNhs11198.1368-26H188.44
liver, neonate N30.CNhs11106.1382-42D199.87
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G247.94
lung, embryo E14.CNhs10604.404-26F831.78
lung, embryo E15.CNhs11020.432-17C523.93
lung, embryo E16.CNhs10998.458-17B614.79
lung, embryo E17.CNhs10605.480-44A614.41
lung, embryo E18.CNhs10583.1287-20I610.95
lung, neonate N00.CNhs11224.640-42C69.37
lung, neonate N06.CNhs11212.683-20E521.60
lung, neonate N07.CNhs11111.715-19A320.37
lung, neonate N10.CNhs11219.750-23E620.25
lung, neonate N20.CNhs11109.822-18A410.49
lung, neonate N25.CNhs11119.1359-25C78.81
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C239.01
medulla oblongata, neonate N30.CNhs11200.1396-42A339.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1163.75
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2173.75
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3174.71
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7169.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8138.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9149.18
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4158.28
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5147.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6157.32
olfactory brain, adult.CNhs10489.18-22I939.84
ovary, adult.CNhs10507.91-2I715.47
ovary, embryo E18.CNhs11040.505-44H715.14
ovary, neonate N00.CNhs11217.1299-22I414.99
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F413.35
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G910.60
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G829.62
pituitary gland, embryo E12.CNhs11018.346-16E6110.92
pituitary gland, embryo E13.CNhs11009.370-44C7102.19
pituitary gland, embryo E14.CNhs11037.398-44A582.31
pituitary gland, embryo E15.CNhs10592.427-16B961.89
pituitary gland, embryo E16.CNhs11036.449-43F643.88
pituitary gland, embryo E17.CNhs11039.1265-44F548.87
pituitary gland, neonate N00.CNhs11190.1308-22E938.06
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H34.28
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C943.39
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C123.73
spleen, embryo E18.CNhs11011.1271-21F28.33
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E348.72
stomach, embryo E15.CNhs10603.1252-16G822.98
stomach, embryo E16.CNhs11022.459-17D413.93
stomach, embryo E17.CNhs11006.1035-18D510.04
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B88.36
stomach, neonate N07.CNhs11210.718-18A916.86
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F519.89
testis, embryo E15.CNhs11034.443-27C514.06
testis, embryo E16.CNhs11033.470-26G57.78
testis, embryo E17.CNhs11029.486-18I57.62
testis, embryo E18.CNhs11027.503-18G57.94
testis, neonate N00.CNhs11189.1300-22B710.91
testis, neonate N07.CNhs11222.726-26I413.28
testis, neonate N10.CNhs11204.763-44D923.91
testis, neonate N20.CNhs11110.839-18H311.60
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I49.33
thymus, embryo E15.CNhs11005.430-45I25.03
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A140.10
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.67
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.83
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A732.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.69
whole body, embryo E11.CNhs11014.324-5I830.62
whole body, embryo E12.CNhs10587.857-27C966.24
whole body, embryo E13.CNhs10512.372-23H258.22
whole body, embryo E14.5.CNhs10578.420-27D238.17
whole body, embryo E14.CNhs10519.395-14B123.90
whole body, embryo E16.CNhs10514.453-14F215.63
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G536.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.75
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G537.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G532.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G529.40
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.01
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G532.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G534.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G536.46
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G529.26
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G529.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G528.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G533.72
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G538.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G534.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G531.81
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G531.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G528.41
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G532.59
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G536.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G533.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.76
whole body, embryo E17.5.CNhs10513.490-9F927.39
whole body, embryo E17.CNhs10517.475-3I554.46
whole body, embryo E18.CNhs10516.493-3B326.20
whole body, neonate N00.CNhs10525.657-19C231.80
whole body, neonate N01.CNhs10576.659-23C616.64
whole body, neonate N06.CNhs10515.692-21D121.84
whole body, neonate N10.CNhs10518.761-6B422.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell4.62e-1543
ectodermal cell6.56e-1544
neurectodermal cell6.56e-1544
electrically responsive cell2.11e-1339
electrically active cell2.11e-1339
neuron8.66e-1233
neuronal stem cell8.66e-1233
neuroblast8.66e-1233
electrically signaling cell8.66e-1233
embryonic cell3.80e-0870
CNS neuron (sensu Vertebrata)2.46e-0723
neuroblast (sensu Vertebrata)2.46e-0723

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.31e-2692
tube8.26e-25114
anatomical conduit2.72e-21122
nervous system8.79e-2175
central nervous system5.34e-2073
ectoderm-derived structure1.72e-1895
ectoderm1.72e-1895
presumptive ectoderm1.72e-1895
neurectoderm8.01e-1764
neural plate8.01e-1764
presumptive neural plate8.01e-1764
epithelial tube2.03e-1447
pre-chordal neural plate2.43e-1349
ecto-epithelium6.43e-1373
primary circulatory organ2.16e-1218
heart2.16e-1218
primitive heart tube2.16e-1218
primary heart field2.16e-1218
anterior lateral plate mesoderm2.16e-1218
heart tube2.16e-1218
heart primordium2.16e-1218
cardiac mesoderm2.16e-1218
cardiogenic plate2.16e-1218
heart rudiment2.16e-1218
regional part of nervous system3.53e-1254
neural tube4.77e-1252
neural rod4.77e-1252
future spinal cord4.77e-1252
neural keel4.77e-1252
brain3.79e-1147
future brain3.79e-1147
cardiovascular system4.37e-1123
circulatory system4.37e-1123
regional part of brain5.89e-1146
anterior neural tube2.05e-1040
regional part of forebrain3.79e-1039
forebrain3.79e-1039
future forebrain3.79e-1039
cell layer1.21e-08176
gray matter2.24e-0834
epithelium2.94e-08174
brain grey matter1.28e-0729
regional part of telencephalon1.28e-0729
telencephalon1.28e-0729
embryo1.87e-07320
peripheral nervous system6.07e-0711
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