FFCP PHASE1:Mm9::chr1:34899784..34899789,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214469 | |EntrezGene=214469 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=G3UWF0,E9Q917,Q80XQ8 | |UniProt=G3UWF0,E9Q917,Q80XQ8 | ||
|association_with_transcript=105bp_to_ENSMUST00000167518,ENSMUST00000170092,NM_001160235,NM_001160236,NM_174997,uc007apj.2,uc011wje.1,uc011wjf.1_5end | |association_with_transcript=105bp_to_ENSMUST00000167518,ENSMUST00000170092,NM_001160235,NM_001160236,NM_174997,uc007apj.2,uc011wje.1,uc011wjf.1_5end | ||
|cluster_id=chr1:34899784..34899789,- | |||
|description=CAGE_peak_5_at_Fam168b_5end | |description=CAGE_peak_5_at_Fam168b_5end | ||
|id=chr1:34899784..34899789,- | |id=chr1:34899784..34899789,- | ||
|ontology_enrichment_celltype=CL:0000540!1.68e-16!33;CL:0000047!1.68e-16!33;CL:0000031!1.68e-16!33;CL:0000404!1.68e-16!33;CL:0000117!1.81e-13!23;CL:0000337!1.81e-13!23;CL:0002319!1.36e-12!43;CL:0000393!1.48e-12!39;CL:0000211!1.48e-12!39;CL:0000221!3.23e-12!44;CL:0000133!3.23e-12!44;CL:0000055!3.39e-09!50 | |ontology_enrichment_celltype=CL:0000540!1.68e-16!33;CL:0000047!1.68e-16!33;CL:0000031!1.68e-16!33;CL:0000404!1.68e-16!33;CL:0000117!1.81e-13!23;CL:0000337!1.81e-13!23;CL:0002319!1.36e-12!43;CL:0000393!1.48e-12!39;CL:0000211!1.48e-12!39;CL:0000221!3.23e-12!44;CL:0000133!3.23e-12!44;CL:0000055!3.39e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.24e-21,33;CL:0000047,7.24e-21,33;CL:0000031,7.24e-21,33;CL:0000404,7.24e-21,33;CL:0000117,6.06e-17,23;CL:0000337,6.06e-17,23;CL:0000393,2.41e-16,39;CL:0000211,2.41e-16,39;CL:0002319,5.61e-15,43;CL:0000221,2.63e-14,44;CL:0000133,2.63e-14,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.59e-25!73;UBERON:0005743!5.59e-25!73;UBERON:0000073!8.36e-24!75;UBERON:0001016!8.36e-24!75;UBERON:0004121!5.63e-19!102;UBERON:0000924!5.63e-19!102;UBERON:0006601!5.63e-19!102;UBERON:0002346!3.84e-18!71;UBERON:0003075!3.84e-18!71;UBERON:0007284!3.84e-18!71;UBERON:0002020!6.83e-18!34;UBERON:0001049!6.97e-18!52;UBERON:0005068!6.97e-18!52;UBERON:0006241!6.97e-18!52;UBERON:0007135!6.97e-18!52;UBERON:0000955!1.38e-16!50;UBERON:0006238!1.38e-16!50;UBERON:0002616!2.49e-16!49;UBERON:0000033!2.14e-15!63;UBERON:0002791!4.86e-15!29;UBERON:0003528!4.86e-15!29;UBERON:0001893!4.86e-15!29;UBERON:0003056!6.84e-15!49;UBERON:0003080!2.62e-14!40;UBERON:0002780!6.07e-14!39;UBERON:0001890!6.07e-14!39;UBERON:0006240!6.07e-14!39;UBERON:0000153!6.61e-13!94;UBERON:0007811!1.18e-11!86;UBERON:0000956!1.37e-11!21;UBERON:0001869!1.37e-11!21;UBERON:0000203!1.37e-11!21;UBERON:0002619!3.50e-09!17;UBERON:0002021!2.57e-07!10;UBERON:0000411!2.57e-07!10;UBERON:0001950!2.57e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.99e-28,73;UBERON:0001016,5.81e-27,75;UBERON:0004121,1.89e-23,95;UBERON:0000924,1.89e-23,95;UBERON:0006601,1.89e-23,95;UBERON:0002346,3.84e-22,64;UBERON:0003075,3.84e-22,64;UBERON:0007284,3.84e-22,64;UBERON:0002020,2.88e-21,34;UBERON:0000073,1.07e-20,54;UBERON:0001049,4.25e-19,52;UBERON:0005068,4.25e-19,52;UBERON:0006241,4.25e-19,52;UBERON:0007135,4.25e-19,52;UBERON:0010371,8.58e-19,73;UBERON:0003528,1.30e-17,29;UBERON:0002791,1.30e-17,29;UBERON:0001893,1.30e-17,29;UBERON:0003056,1.01e-15,49;UBERON:0000955,1.44e-15,47;UBERON:0006238,1.44e-15,47;UBERON:0002616,3.04e-15,46;UBERON:0003080,1.37e-14,40;UBERON:0010314,2.48e-14,92;UBERON:0002780,3.90e-14,39;UBERON:0001890,3.90e-14,39;UBERON:0006240,3.90e-14,39;UBERON:0000956,3.73e-13,21;UBERON:0001869,3.73e-13,21;UBERON:0000203,3.73e-13,21;UBERON:0002619,4.19e-10,17;UBERON:0002021,5.31e-09,10;UBERON:0000411,5.31e-09,10;UBERON:0001950,5.31e-09,10 | |||
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| ||
|short_description=p5@Fam168b | |short_description=p5@Fam168b | ||
}} | }} |
Latest revision as of 02:07, 27 September 2015
Short description: | p5@Fam168b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Fam168b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 105bp_to_ENSMUST00000167518, ENSMUST00000170092, NM_001160235, NM_001160236, NM_174997, uc007apj.2, uc011wje.1, uc011wjf.1_5end |
EntrezGene: | Fam168b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.24e-21 | 33 |
neuronal stem cell | 7.24e-21 | 33 |
neuroblast | 7.24e-21 | 33 |
electrically signaling cell | 7.24e-21 | 33 |
CNS neuron (sensu Vertebrata) | 6.06e-17 | 23 |
neuroblast (sensu Vertebrata) | 6.06e-17 | 23 |
electrically responsive cell | 2.41e-16 | 39 |
electrically active cell | 2.41e-16 | 39 |
neural cell | 5.61e-15 | 43 |
ectodermal cell | 2.63e-14 | 44 |
neurectodermal cell | 2.63e-14 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.99e-28 | 73 |
nervous system | 5.81e-27 | 75 |
ectoderm-derived structure | 1.89e-23 | 95 |
ectoderm | 1.89e-23 | 95 |
presumptive ectoderm | 1.89e-23 | 95 |
neurectoderm | 3.84e-22 | 64 |
neural plate | 3.84e-22 | 64 |
presumptive neural plate | 3.84e-22 | 64 |
gray matter | 2.88e-21 | 34 |
regional part of nervous system | 1.07e-20 | 54 |
neural tube | 4.25e-19 | 52 |
neural rod | 4.25e-19 | 52 |
future spinal cord | 4.25e-19 | 52 |
neural keel | 4.25e-19 | 52 |
ecto-epithelium | 8.58e-19 | 73 |
brain grey matter | 1.30e-17 | 29 |
regional part of telencephalon | 1.30e-17 | 29 |
telencephalon | 1.30e-17 | 29 |
pre-chordal neural plate | 1.01e-15 | 49 |
brain | 1.44e-15 | 47 |
future brain | 1.44e-15 | 47 |
regional part of brain | 3.04e-15 | 46 |
anterior neural tube | 1.37e-14 | 40 |
structure with developmental contribution from neural crest | 2.48e-14 | 92 |
regional part of forebrain | 3.90e-14 | 39 |
forebrain | 3.90e-14 | 39 |
future forebrain | 3.90e-14 | 39 |
cerebral cortex | 3.73e-13 | 21 |
cerebral hemisphere | 3.73e-13 | 21 |
pallium | 3.73e-13 | 21 |
regional part of cerebral cortex | 4.19e-10 | 17 |
occipital lobe | 5.31e-09 | 10 |
visual cortex | 5.31e-09 | 10 |
neocortex | 5.31e-09 | 10 |