FFCP PHASE1:Mm9::chr1:36364590..36364608,+: Difference between revisions
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{{FFCP|EntrezGene=214855|HGNC=|MCL_coexpression_id=280|UniProt=D3Z0W0,Q3U108,D3Z7U1|association_with_transcript=0bp_to_ENSMUST00000097778,ENSMUST00000115031,ENSMUST00000115032,ENSMUST00000116629,ENSMUST00000124280,ENSMUST00000137906,ENSMUST00000142319,ENSMUST00000145179,ENSMUST00000150747_5end|description=CAGE_peak_1_at_Arid5a_5end|id=chr1:36364590..36364608,+|ontology_enrichment_celltype=CL:0000988!8.16e-13!32;CL:0002032!8.16e-13!32;CL:0000037!8.16e-13!32;CL:0000566!8.16e-13!32;CL:0000837!8.16e-13!32;CL:0000219!2.80e-11!54;CL:0002031!8.06e-11!25;CL:0002320!9.70e-10!46;CL:0000134!9.70e-10!46;CL:0000063!3.37e-09!66;CL:0000838!8.14e-09!12;CL:0000738!9.47e-09!17;CL:0002087!9.47e-09!17;CL:0000084!3.97e-08!11;CL:0000827!3.97e-08!11;CL:0000542!3.20e-07!13;CL:0000051!3.20e-07!13;CL:0000791!4.73e-07!9;CL:0000789!4.73e-07!9;CL:0002420!4.73e-07!9;CL:0002419!4.73e-07!9;CL:0000790!4.73e-07!9;CL:0000049!6.16e-07!19|ontology_enrichment_celltype_v019_2=CL:0000988,7.78e-13,32;CL:0002032,7.78e-13,32;CL:0000037,7.78e-13,32;CL:0000837,7.78e-13,32;CL:0000219,2.75e-11,54;CL:0002031,7.67e-11,25;CL:0002320,9.53e-10,46;CL:0000134,9.53e-10,46;CL:0000838,8.14e-09,12;CL:0000738,9.47e-09,17;CL:0002087,9.47e-09,17;CL:0000084,3.97e-08,11;CL:0000827,3.97e-08,11;CL:0000542,3.19e-07,13;CL:0000051,3.19e-07,13;CL:0000791,4.73e-07,9;CL:0000789,4.73e-07,9;CL:0002420,4.73e-07,9;CL:0002419,4.73e-07,9;CL:0000790,4.73e-07,9;CL:0000049,5.90e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.40e-16!48;UBERON:0002390!4.94e-16!45;UBERON:0003061!4.94e-16!45;UBERON:0003081!5.01e-14!88;UBERON:0002204!5.16e-11!32;UBERON:0000072!1.75e-10!27;UBERON:0000063!6.48e-10!35;UBERON:0001004!7.94e-10!42;UBERON:0002384!9.70e-10!46;UBERON:0000065!1.26e-09!41;UBERON:0004177!1.84e-09!29;UBERON:0001474!1.95e-09!22;UBERON:0004765!1.95e-09!22;UBERON:0001434!1.95e-09!22;UBERON:0006562!6.39e-09!24;UBERON:0001557!6.39e-09!24;UBERON:0001042!6.39e-09!24;UBERON:0008814!6.39e-09!24;UBERON:0009145!6.39e-09!24;UBERON:0003408!6.46e-09!24;UBERON:0002370!9.55e-09!23;UBERON:0000974!9.55e-09!23;UBERON:0004807!9.55e-09!23;UBERON:0005058!9.55e-09!23;UBERON:0003351!9.55e-09!23;UBERON:0009113!9.55e-09!23;UBERON:0003295!9.55e-09!23;UBERON:0009722!9.55e-09!23;UBERON:0005562!9.55e-09!23;UBERON:0007690!9.55e-09!23;UBERON:0002371!1.46e-07!16;UBERON:0002405!2.94e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.40e-16,48;UBERON:0002405,1.40e-16,48;UBERON:0002390,4.93e-16,45;UBERON:0003061,4.93e-16,45;UBERON:0003081,1.49e-13,87;UBERON:0002204,5.16e-11,32;UBERON:0000072,1.75e-10,27;UBERON:0001004,7.94e-10,42;UBERON:0002384,9.53e-10,46;UBERON:0000065,1.26e-09,41;UBERON:0004177,1.84e-09,29;UBERON:0005057,1.84e-09,29;UBERON:0001474,1.95e-09,22;UBERON:0004765,1.95e-09,22;UBERON:0001434,1.95e-09,22;UBERON:0000926,2.70e-09,120;UBERON:0004120,2.70e-09,120;UBERON:0006603,2.70e-09,120;UBERON:0006562,6.39e-09,24;UBERON:0001557,6.39e-09,24;UBERON:0001042,6.39e-09,24;UBERON:0008814,6.39e-09,24;UBERON:0009145,6.39e-09,24;UBERON:0003408,6.46e-09,24;UBERON:0002370,9.55e-09,23;UBERON:0000974,9.55e-09,23;UBERON:0004807,9.55e-09,23;UBERON:0005058,9.55e-09,23;UBERON:0003351,9.55e-09,23;UBERON:0009113,9.55e-09,23;UBERON:0003295,9.55e-09,23;UBERON:0009722,9.55e-09,23;UBERON:0005562,9.55e-09,23;UBERON:0007690,9.55e-09,23;UBERON:0000077,1.33e-08,35;UBERON:0002371,1.46e-07,16|phase1_expression=22.1005409004616,8.37540978334467,7.27998783023258,11.1911758183527,9.5170188689806,9.23335995515394,8.64366770203445,122.925403916381,127.695370991562,125.926715161232,54.2760959274851,29.9145596232512,147.232627740837,141.183949906681,17.9879271380458,12.3509913107794,11.8925519281785,65.7738614771926,68.6943312364751,70.873071850271,9.95006494767516,53.7164045996789,67.6507453869843,10.5594999043648,12.15869189656,4.01962374880514,6.03066794622705,6.24866574789078,3.04037471130198,3.52842181663903,7.76056787293567,22.8611042445467,9.84103660135312,0,6.35473563452804,3.32469290716985,6.32925004413344,85.7989843010661,72.6641870407134,63.8698967648034,110.587519749831,106.555095653518,72.3410426016419,7.80560271448579,9.7321853970734,12.2976323948327,9.38869613217647,14.6076854774899,17.7945808014922,15.1655321277941,9.65906309215001,14.3752564364972,235.063431086889,426.512939502671,421.125530325507,10.0331180054019,14.0401385569991,12.3761302146586,2.22548106945558,4.23192783417626,0.633831403506179,12.1984031544888,3.55717918444456,26.0970918011606,33.6214563272771,24.8668040231135,29.6604109413221,37.6533939215123,1.55534418462716,0.405017814995072,1.47227472945967,9.71213346972932,8.61387309711293,0.979926393719632,0.862609239164127,0,7.70811166995721,11.3641730895817,13.3637683932932,1.05509030184155,1.00636407962651,0,8.37548997004143,6.19038871034848,10.5430790965999,5.59794312399969,6.83384067835694,2.42319279572891,21.2033341332915,35.9720626108299,139.134954576805,14.6272059086836,26.5188820146023,2.15881276655127,0.649776417447669,0.448026887097336,8.42666520790511,4.26075806445144,4.1565760736459,5.3000936176551,15.4927761754349,6.41632387071589,15.2883143823987,21.3320010945999,52.3908319247138,50.6719730950197,66.2237022969366,8.10705546005326,48.4213842420211,5.04703272820404,3.64319186208885,5.48037860961854,5.07354093963329,2.86373017049983,6.82014501387088,1.88499886994513,5.43828929015623,15.7613299042704,41.5766959416441,15.2060838950565,23.1883594383413,17.455509112868,5.59175283654366,10.8328894894272,12.3573557019938,9.45191104271788,95.2530239822066,60.5901758303342,79.1647514665193,9.73639156131348,8.6925114535539,2.26177833803156,7.64827008846016,9.97290283588289,13.714010940931,9.73447578406546,9.77657892963036,22.3932547098167,6.06534620240819,2.10441855886474,2.60240885925407,4.13823787980251,4.68161537493908,5.42537344208574,10.2735113718505,6.14945857367279,6.46541899462129,5.69147415625834,1.72454394346274,2.26927296201383,5.63043597324636,4.3839146485515,2.78047249225598,10.0993128291428,9.05441400194951,1.39323986772945,48.4527099246132,34.2272716462571,43.4770154075257,8.07790512888457,8.20841209933837,9.00310307305074,10.8902578369197,11.8058539048442,8.17615698303105,9.06882384526591,12.0723030629829,17.1645053279739,10.2027106946358,14.1184019108022,13.0520783368828,10.8187990694746,12.5143565715899,10.3338942445486,12.6173969138476,5.76265829323993,3.96502539580558,2.64450566663544,1.06644125267617,1.62565670302307,1.67527699718721,2.42020229548011,2.89091456998331,2.47293313946327,6.64340686162316,3.62337700392824,5.52937459360593,4.77495532898762,5.45899443933536,6.29173586057955,3.8904848977445,5.97423819763102,3.60369011810855,2.62771579002376,6.76246414038483,4.2766778847516,4.46090720485539,5.40045813155453,4.93244989569207,2.95220295959204,4.23896565171712,3.57851775373222,2.96452627087149,2.33583148002532,2.35870794135844,2.24862112384854,3.24576194221605,4.10001171579109,7.63877555344259,10.9324532231308,11.6737363278025,4.11842119782122,1.43768206527355,6.32639611036456,3.74445207737473,2.77836765741823,3.04975602987251,3.85954817090694,24.9416806724916,3.03186258832776,4.23708938749267,4.41337223015489,3.75504397261603,5.86271901046355,11.4260947625287,20.8793003207845,18.6009470045305,21.7035395855799,23.4398509926506,15.8947415274266,17.9592381140531,13.018415272336,15.0791283939272,29.914812610029,57.5364199432272,36.14771376592,13.6468001489623,11.9555920324047,2.62295912602681,20.7026160307586,4.73262329124385,3.90438744296638,5.60100834105277,4.30143836314594,7.5751549188014,10.190755108398,1.61924280669958,3.21481443702443,5.92931666919785,15.7447445046685,5.67760340833074,7.12262414669021,7.81857404897165,10.2281476242972,3.98235415019888,3.39892890616974,2.41858845571801,2.82907619633847,5.61073596473468,6.45613810682248,14.4719844174204,7.99774204850512,6.77345018930971,8.21695570633122,11.5960469432499,4.12542172992747,14.6389030474129,1.98067203434441,2.32845630808958,2.7863814554107,4.78818630834139,11.4156043265325,13.8221177305782,27.0973804711993,4.69343416127421,4.2366414172764,3.52845436887939,17.3130565588554,15.0161916827192,9.40881628879231,9.54978752025092,10.9974402829191,7.57850175237612,14.2777482548092,26.9975991660607,8.2554747185289,15.0007567169466,9.60679130723924,16.266613098802,19.4461447225544,170.658343713831,156.605675150173,143.313372835187,7.63736494412091,2.21435195506795,1.82987520414164,2.59212817972323,1.88179466413022,2.62035076495413,5.79916689454729,8.67861285116027,5.23511883968059,7.12882353104861,14.9121435140862,2.25477175473676,3.73791365109947,3.47462829959905,3.11121901350476,3.7456348808542,2.36538575687089,5.16371850041317,9.50492009360836,18.5601039633508,4.83168241652012,6.04863013141517,22.1207784439725,18.4479945914049,18.3852613325041,14.0314488816019,13.9640822620636,17.0865965111888,20.7938127669546,19.9380861685679,16.5584977914962,20.42342418354,18.7536704354523,21.0509022397865,25.4961380346873,26.6479336973977,14.964205318604,2.21985953374065,0.62799699626633,0.503653849092235,21.6372345316053,19.5189774469229,15.3847364384503,14.3626813982974,6.52043735245972,10.1655331671072,13.8097570952153,13.1765968091061,8.248952752497,7.53590771747707,8.3093328712867,13.5004500046361,9.90706647093285,22.203978040226,11.39072685854,1.24544817101012,1.59609949360412,2.90247129782028,8.75184181445858,3.35381060204772,5.88299227040045,6.44515510624684,9.47761263298913,9.30665707816264,6.31743029409494,11.1530891951705,7.73367999682912,6.46126401542189,7.93911889820379,8.32814299856392,11.4310485907938,9.03897742369873,9.25964258225784,6.59337441285291,8.09594060739185,9.60033906679163,6.92155644021416,6.67621331852499,9.1568242478367,8.18751609613376,8.46146078916765,8.23175877927476,7.89209134313529,8.41985505844343,7.2948495315506,9.84670650430645,10.6384840965609,7.36615877705441,8.98633678878603,6.36591816237767,11.2414760072076,7.01794825336225,12.4625211348013,21.998158187917,21.1767762354735,17.3900876715316|short_description=p1@Arid5a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214855 | |||
|HGNC= | |||
|MCL_coexpression_id=280 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z0W0,Q3U108,D3Z7U1 | |||
|association_with_transcript=0bp_to_ENSMUST00000097778,ENSMUST00000115031,ENSMUST00000115032,ENSMUST00000116629,ENSMUST00000124280,ENSMUST00000137906,ENSMUST00000142319,ENSMUST00000145179,ENSMUST00000150747_5end | |||
|cluster_id=chr1:36364590..36364608,+ | |||
|description=CAGE_peak_1_at_Arid5a_5end | |||
|id=chr1:36364590..36364608,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.16e-13!32;CL:0002032!8.16e-13!32;CL:0000037!8.16e-13!32;CL:0000566!8.16e-13!32;CL:0000837!8.16e-13!32;CL:0000219!2.80e-11!54;CL:0002031!8.06e-11!25;CL:0002320!9.70e-10!46;CL:0000134!9.70e-10!46;CL:0000063!3.37e-09!66;CL:0000838!8.14e-09!12;CL:0000738!9.47e-09!17;CL:0002087!9.47e-09!17;CL:0000084!3.97e-08!11;CL:0000827!3.97e-08!11;CL:0000542!3.20e-07!13;CL:0000051!3.20e-07!13;CL:0000791!4.73e-07!9;CL:0000789!4.73e-07!9;CL:0002420!4.73e-07!9;CL:0002419!4.73e-07!9;CL:0000790!4.73e-07!9;CL:0000049!6.16e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.78e-13,32;CL:0002032,7.78e-13,32;CL:0000037,7.78e-13,32;CL:0000837,7.78e-13,32;CL:0000219,2.75e-11,54;CL:0002031,7.67e-11,25;CL:0002320,9.53e-10,46;CL:0000134,9.53e-10,46;CL:0000838,8.14e-09,12;CL:0000738,9.47e-09,17;CL:0002087,9.47e-09,17;CL:0000084,3.97e-08,11;CL:0000827,3.97e-08,11;CL:0000542,3.19e-07,13;CL:0000051,3.19e-07,13;CL:0000791,4.73e-07,9;CL:0000789,4.73e-07,9;CL:0002420,4.73e-07,9;CL:0002419,4.73e-07,9;CL:0000790,4.73e-07,9;CL:0000049,5.90e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.40e-16!48;UBERON:0002390!4.94e-16!45;UBERON:0003061!4.94e-16!45;UBERON:0003081!5.01e-14!88;UBERON:0002204!5.16e-11!32;UBERON:0000072!1.75e-10!27;UBERON:0000063!6.48e-10!35;UBERON:0001004!7.94e-10!42;UBERON:0002384!9.70e-10!46;UBERON:0000065!1.26e-09!41;UBERON:0004177!1.84e-09!29;UBERON:0001474!1.95e-09!22;UBERON:0004765!1.95e-09!22;UBERON:0001434!1.95e-09!22;UBERON:0006562!6.39e-09!24;UBERON:0001557!6.39e-09!24;UBERON:0001042!6.39e-09!24;UBERON:0008814!6.39e-09!24;UBERON:0009145!6.39e-09!24;UBERON:0003408!6.46e-09!24;UBERON:0002370!9.55e-09!23;UBERON:0000974!9.55e-09!23;UBERON:0004807!9.55e-09!23;UBERON:0005058!9.55e-09!23;UBERON:0003351!9.55e-09!23;UBERON:0009113!9.55e-09!23;UBERON:0003295!9.55e-09!23;UBERON:0009722!9.55e-09!23;UBERON:0005562!9.55e-09!23;UBERON:0007690!9.55e-09!23;UBERON:0002371!1.46e-07!16;UBERON:0002405!2.94e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.40e-16,48;UBERON:0002405,1.40e-16,48;UBERON:0002390,4.93e-16,45;UBERON:0003061,4.93e-16,45;UBERON:0003081,1.49e-13,87;UBERON:0002204,5.16e-11,32;UBERON:0000072,1.75e-10,27;UBERON:0001004,7.94e-10,42;UBERON:0002384,9.53e-10,46;UBERON:0000065,1.26e-09,41;UBERON:0004177,1.84e-09,29;UBERON:0005057,1.84e-09,29;UBERON:0001474,1.95e-09,22;UBERON:0004765,1.95e-09,22;UBERON:0001434,1.95e-09,22;UBERON:0000926,2.70e-09,120;UBERON:0004120,2.70e-09,120;UBERON:0006603,2.70e-09,120;UBERON:0006562,6.39e-09,24;UBERON:0001557,6.39e-09,24;UBERON:0001042,6.39e-09,24;UBERON:0008814,6.39e-09,24;UBERON:0009145,6.39e-09,24;UBERON:0003408,6.46e-09,24;UBERON:0002370,9.55e-09,23;UBERON:0000974,9.55e-09,23;UBERON:0004807,9.55e-09,23;UBERON:0005058,9.55e-09,23;UBERON:0003351,9.55e-09,23;UBERON:0009113,9.55e-09,23;UBERON:0003295,9.55e-09,23;UBERON:0009722,9.55e-09,23;UBERON:0005562,9.55e-09,23;UBERON:0007690,9.55e-09,23;UBERON:0000077,1.33e-08,35;UBERON:0002371,1.46e-07,16 | |||
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| |||
|short_description=p1@Arid5a | |||
}} |
Latest revision as of 02:15, 27 September 2015
Short description: | p1@Arid5a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arid5a_5end |
Coexpression cluster: | MCL_coexpression_mm9:280 |
Association with transcript: | 0bp_to_ENSMUST00000097778, ENSMUST00000115031, ENSMUST00000115032, ENSMUST00000116629, ENSMUST00000124280, ENSMUST00000137906, ENSMUST00000142319, ENSMUST00000145179, ENSMUST00000150747_5end |
EntrezGene: | Arid5a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.78e-13 | 32 |
hematopoietic oligopotent progenitor cell | 7.78e-13 | 32 |
hematopoietic stem cell | 7.78e-13 | 32 |
hematopoietic multipotent progenitor cell | 7.78e-13 | 32 |
motile cell | 2.75e-11 | 54 |
hematopoietic lineage restricted progenitor cell | 7.67e-11 | 25 |
connective tissue cell | 9.53e-10 | 46 |
mesenchymal cell | 9.53e-10 | 46 |
lymphoid lineage restricted progenitor cell | 8.14e-09 | 12 |
leukocyte | 9.47e-09 | 17 |
nongranular leukocyte | 9.47e-09 | 17 |
T cell | 3.97e-08 | 11 |
pro-T cell | 3.97e-08 | 11 |
lymphocyte | 3.19e-07 | 13 |
common lymphoid progenitor | 3.19e-07 | 13 |
mature alpha-beta T cell | 4.73e-07 | 9 |
alpha-beta T cell | 4.73e-07 | 9 |
immature T cell | 4.73e-07 | 9 |
mature T cell | 4.73e-07 | 9 |
immature alpha-beta T cell | 4.73e-07 | 9 |
common myeloid progenitor | 5.90e-07 | 19 |