FFCP PHASE1:Mm9::chr18:20904768..20904834,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:20904768..20904834,- to FFCP PHASE1:Mm9::chr18:20904768..20904834,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56386 | |EntrezGene=56386 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=240 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WVK5,Q3UUA9 | |UniProt=Q9WVK5,Q3UUA9 | ||
|association_with_transcript=70bp_to_ENSMUST00000070080,NM_019737,uc008eeu.2_5end | |||
|cluster_id=chr18:20904768..20904834,- | |||
|description=CAGE_peak_2_at_B4galt6_5end | |||
|id=chr18:20904768..20904834,- | |||
|ontology_enrichment_celltype=CL:0002319!1.24e-08!43;CL:0000221!1.26e-08!44;CL:0000133!1.26e-08!44;CL:0000540!3.78e-08!33;CL:0000047!3.78e-08!33;CL:0000031!3.78e-08!33;CL:0000404!3.78e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.21e-08,43;CL:0000221,1.23e-08,44;CL:0000133,1.23e-08,44;CL:0000540,3.71e-08,33;CL:0000047,3.71e-08,33;CL:0000031,3.71e-08,33;CL:0000404,3.71e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.82e-20!75;UBERON:0001016!2.82e-20!75;UBERON:0001017!4.49e-20!73;UBERON:0005743!4.49e-20!73;UBERON:0004121!2.10e-13!102;UBERON:0000924!2.10e-13!102;UBERON:0006601!2.10e-13!102;UBERON:0001049!3.03e-13!52;UBERON:0005068!3.03e-13!52;UBERON:0006241!3.03e-13!52;UBERON:0007135!3.03e-13!52;UBERON:0000955!2.40e-12!50;UBERON:0006238!2.40e-12!50;UBERON:0002616!7.97e-12!49;UBERON:0000033!5.68e-11!63;UBERON:0002346!6.95e-11!71;UBERON:0003075!6.95e-11!71;UBERON:0007284!6.95e-11!71;UBERON:0002020!1.02e-09!34;UBERON:0003080!4.03e-09!40;UBERON:0002780!1.07e-08!39;UBERON:0001890!1.07e-08!39;UBERON:0006240!1.07e-08!39;UBERON:0003056!3.45e-08!49;UBERON:0002791!2.48e-07!29;UBERON:0003528!2.48e-07!29;UBERON:0001893!2.48e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.66e-20,75;UBERON:0001017,4.24e-20,73;UBERON:0004121,2.01e-15,95;UBERON:0000924,2.01e-15,95;UBERON:0006601,2.01e-15,95;UBERON:0000073,2.18e-14,54;UBERON:0001049,2.93e-13,52;UBERON:0005068,2.93e-13,52;UBERON:0006241,2.93e-13,52;UBERON:0007135,2.93e-13,52;UBERON:0002346,3.35e-13,64;UBERON:0003075,3.35e-13,64;UBERON:0007284,3.35e-13,64;UBERON:0010314,5.12e-13,92;UBERON:0000955,6.53e-11,47;UBERON:0006238,6.53e-11,47;UBERON:0002616,2.09e-10,46;UBERON:0010371,2.93e-10,73;UBERON:0002020,9.93e-10,34;UBERON:0003080,3.94e-09,40;UBERON:0002780,1.05e-08,39;UBERON:0001890,1.05e-08,39;UBERON:0006240,1.05e-08,39;UBERON:0003056,3.39e-08,49;UBERON:0003528,2.44e-07,29;UBERON:0002791,2.44e-07,29;UBERON:0001893,2.44e-07,29 | |||
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|phase1_expression=7.36684696682052,65.6073766361999,97.3698372293607,37.8080264133538,43.0770327753859,23.1673395238408,19.8570744506197,0,0,0,0,0,0,0.0874204024189974,0.333109761815663,0,0.699561878128147,0.315462165358238,0.822686601634433,0,9.60989178707088,0,0,29.918583062367,40.1466241867548,49.9581808780068,37.4762936658395,33.6135122989987,20.7125527207448,21.674591159354,32.1509240450192,0,0,0,3.17736781726402,5.98444723290572,5.10423390655923,8.37063261473815,5.4693474116666,5.23523743973798,5.29408339227913,6.83045484958446,3.39857247121808,7.1761186246079,7.80602370390262,8.44315059943735,4.69434806608824,10.4652075062614,11.2039953194581,18.2764105129826,5.73944328663986,10.062679505548,0.167782606057736,0,0,5.14518872071894,8.02293631828519,3.09403255366465,14.3644687210314,17.9856932952491,17.1134478946668,10.165335962074,5.33576877666684,38.2457379844595,44.4989863155138,35.524005747305,27.2636100571748,16.1371688235053,7.8804105354443,5.53524347159932,6.30974884054146,28.5650984403804,26.9459619960969,6.36952155917761,4.88811902193005,4.5960939330501,30.8324466798288,28.7296510691672,25.4986845205364,17.9365351313064,17.7486028588675,15.6274011167028,18.1468949350898,28.138130501584,30.4068513075852,35.0608016713665,37.4437520501641,22.1815340532108,9.46577416664801,15.0387404612503,11.3047150593654,1.72084775396277,0.679971333707751,0.539703191637817,0,0.448026887097336,6.03911006566533,8.862376774059,6.49465011507172,7.0667914902068,9.85903938436764,0,0,0,0.649473123033642,0.760079596425296,0.505524445014783,8.67797485864856,8.02707439306232,7.12522267511159,5.89850111004862,4.87144765299426,4.15107895060905,6.33035090321015,7.76085467095652,3.64433114856059,2.71914464507811,6.65157041831594,19.4614321428972,11.0001457964238,7.50861162765338,4.84875253135222,24.2309289583559,31.6203260772471,28.9036455402568,25.5457055208591,2.51611761462433,1.79970819298022,1.52484272487678,26.5129431746536,27.4500361691176,10.4293112253677,35.1125126788398,27.6172693916757,29.298114282898,21.415846724944,7.84163101647435,4.97627882440372,0.758168275301024,3.99839526184301,10.7999967659044,6.89706313300419,11.7040384373477,9.34369870581433,9.59314638033723,7.17436833595159,9.55757590509234,8.2785078636485,9.05385570317937,12.4810012910761,8.09375171154165,9.86380795924087,6.67313398141435,7.3132954969655,8.0255033199098,6.56813080501028,4.21327912387941,10.808612098818,8.24074148247219,19.0555710732662,18.9966108584688,15.3052752241863,17.2823656977203,16.9217239302767,16.1980468531747,16.0448421877781,15.5598572811779,11.6765342367169,13.9875872426458,13.1333971263276,13.6195600037038,11.2573990317506,12.2948064562988,9.66286215074677,33.8566817188245,20.5809224758569,31.059365600477,21.9493970330742,13.2238715331845,10.4506502337197,9.92279452180119,7.46229041106367,7.11609740303585,6.27744566171445,19.9302205848695,10.5407331023367,9.55073793441024,11.5394753783867,11.1129529657898,26.9645822596266,14.0489732418551,17.3252907731299,10.2420666514664,9.48262654660749,6.76246414038483,11.2008230314923,9.89157684554891,9.18779240563173,9.10606134589305,10.6279306545314,6.90794402502049,6.16985819609003,0.592905254174298,3.33690211432188,4.91397487783007,4.04751802292737,4.46292267054706,4.10001171579109,4.83789118384698,4.60313819921297,3.89124544260085,3.84385978463314,7.18841032636773,4.83783231969054,2.80833905803104,2.27320990152401,1.4351793081753,1.4473305640901,1.84753190166605,9.66406200029472,8.31121379854332,5.94107800213158,3.98973422090454,3.51763140627813,3.09456733151818,3.12213836572478,3.15270288212382,2.21464689648775,3.34855014180723,2.29408640602033,2.24490476425664,1.01254341007058,24.1266054302836,32.6343410291226,1.96705709207614,3.31124095565679,22.9587343682543,18.4022347949759,8.6885521049638,1.76729649043061,17.0374438484779,18.350620981942,24.3428439438063,16.7278158566786,19.3834846451683,29.1568826712497,21.4549671887694,25.7185154961954,20.9502522311657,30.5255250600717,4.82596289708113,9.61554259803178,7.81857404897165,13.3625799607754,7.96470830039777,15.2951800777638,11.7906187216253,6.97838795096823,5.31543407185391,11.0676653259814,16.5394107627662,14.1778154496227,7.12994756769443,5.05658812697306,3.16255825724996,7.21948802737308,23.4903327970114,7.74262704334634,9.18446654857557,10.7168517515796,14.7192393923087,12.1290795969408,14.8094118541909,7.91608867697958,3.05073220482823,1.90648863777438,1.54369878638473,5.7710188529518,5.16686165426898,3.61877549568935,4.8942661041286,7.2221995887827,20.9866202373493,20.9530591271876,4.61351378154202,5.77883230297023,3.51869602002452,1.50694765603753,1.77702496037333,1.37266903923914,2.88963330989554,4.05859211738608,3.45499934511059,9.54670618015114,10.4390877881775,14.0290432317526,6.58832579012988,7.52717865652087,6.11415178489297,6.47348862647139,9.4224939526883,4.18809507174447,9.72112299688447,16.1548221402601,2.81846469342095,3.88743019714345,3.30916980914195,3.88902376688095,3.35815541042101,3.21016638432478,1.2909296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|short_description=p2@B4galt6 | |||
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Latest revision as of 02:19, 27 September 2015
Short description: | p2@B4galt6 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B4galt6_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | 70bp_to_ENSMUST00000070080, NM_019737, uc008eeu.2_5end |
EntrezGene: | B4galt6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.21e-08 | 43 |
ectodermal cell | 1.23e-08 | 44 |
neurectodermal cell | 1.23e-08 | 44 |
neuron | 3.71e-08 | 33 |
neuronal stem cell | 3.71e-08 | 33 |
neuroblast | 3.71e-08 | 33 |
electrically signaling cell | 3.71e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.66e-20 | 75 |
central nervous system | 4.24e-20 | 73 |
ectoderm-derived structure | 2.01e-15 | 95 |
ectoderm | 2.01e-15 | 95 |
presumptive ectoderm | 2.01e-15 | 95 |
regional part of nervous system | 2.18e-14 | 54 |
neural tube | 2.93e-13 | 52 |
neural rod | 2.93e-13 | 52 |
future spinal cord | 2.93e-13 | 52 |
neural keel | 2.93e-13 | 52 |
neurectoderm | 3.35e-13 | 64 |
neural plate | 3.35e-13 | 64 |
presumptive neural plate | 3.35e-13 | 64 |
structure with developmental contribution from neural crest | 5.12e-13 | 92 |
brain | 6.53e-11 | 47 |
future brain | 6.53e-11 | 47 |
regional part of brain | 2.09e-10 | 46 |
ecto-epithelium | 2.93e-10 | 73 |
gray matter | 9.93e-10 | 34 |
anterior neural tube | 3.94e-09 | 40 |
regional part of forebrain | 1.05e-08 | 39 |
forebrain | 1.05e-08 | 39 |
future forebrain | 1.05e-08 | 39 |
pre-chordal neural plate | 3.39e-08 | 49 |
brain grey matter | 2.44e-07 | 29 |
regional part of telencephalon | 2.44e-07 | 29 |
telencephalon | 2.44e-07 | 29 |