FFCP PHASE1:Mm9::chr18:20904768..20904834,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56386 | |EntrezGene=56386 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=240 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WVK5,Q3UUA9 | |UniProt=Q9WVK5,Q3UUA9 | ||
|association_with_transcript=70bp_to_ENSMUST00000070080,NM_019737,uc008eeu.2_5end | |association_with_transcript=70bp_to_ENSMUST00000070080,NM_019737,uc008eeu.2_5end | ||
|cluster_id=chr18:20904768..20904834,- | |||
|description=CAGE_peak_2_at_B4galt6_5end | |description=CAGE_peak_2_at_B4galt6_5end | ||
|id=chr18:20904768..20904834,- | |id=chr18:20904768..20904834,- | ||
|ontology_enrichment_celltype=CL:0002319!1.24e-08!43;CL:0000221!1.26e-08!44;CL:0000133!1.26e-08!44;CL:0000540!3.78e-08!33;CL:0000047!3.78e-08!33;CL:0000031!3.78e-08!33;CL:0000404!3.78e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.21e-08,43;CL:0000221,1.23e-08,44;CL:0000133,1.23e-08,44;CL:0000540,3.71e-08,33;CL:0000047,3.71e-08,33;CL:0000031,3.71e-08,33;CL:0000404,3.71e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.82e-20!75;UBERON:0001016!2.82e-20!75;UBERON:0001017!4.49e-20!73;UBERON:0005743!4.49e-20!73;UBERON:0004121!2.10e-13!102;UBERON:0000924!2.10e-13!102;UBERON:0006601!2.10e-13!102;UBERON:0001049!3.03e-13!52;UBERON:0005068!3.03e-13!52;UBERON:0006241!3.03e-13!52;UBERON:0007135!3.03e-13!52;UBERON:0000955!2.40e-12!50;UBERON:0006238!2.40e-12!50;UBERON:0002616!7.97e-12!49;UBERON:0000033!5.68e-11!63;UBERON:0002346!6.95e-11!71;UBERON:0003075!6.95e-11!71;UBERON:0007284!6.95e-11!71;UBERON:0002020!1.02e-09!34;UBERON:0003080!4.03e-09!40;UBERON:0002780!1.07e-08!39;UBERON:0001890!1.07e-08!39;UBERON:0006240!1.07e-08!39;UBERON:0003056!3.45e-08!49;UBERON:0002791!2.48e-07!29;UBERON:0003528!2.48e-07!29;UBERON:0001893!2.48e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.66e-20,75;UBERON:0001017,4.24e-20,73;UBERON:0004121,2.01e-15,95;UBERON:0000924,2.01e-15,95;UBERON:0006601,2.01e-15,95;UBERON:0000073,2.18e-14,54;UBERON:0001049,2.93e-13,52;UBERON:0005068,2.93e-13,52;UBERON:0006241,2.93e-13,52;UBERON:0007135,2.93e-13,52;UBERON:0002346,3.35e-13,64;UBERON:0003075,3.35e-13,64;UBERON:0007284,3.35e-13,64;UBERON:0010314,5.12e-13,92;UBERON:0000955,6.53e-11,47;UBERON:0006238,6.53e-11,47;UBERON:0002616,2.09e-10,46;UBERON:0010371,2.93e-10,73;UBERON:0002020,9.93e-10,34;UBERON:0003080,3.94e-09,40;UBERON:0002780,1.05e-08,39;UBERON:0001890,1.05e-08,39;UBERON:0006240,1.05e-08,39;UBERON:0003056,3.39e-08,49;UBERON:0003528,2.44e-07,29;UBERON:0002791,2.44e-07,29;UBERON:0001893,2.44e-07,29 | |||
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| ||
|short_description=p2@B4galt6 | |short_description=p2@B4galt6 | ||
}} | }} |
Latest revision as of 02:19, 27 September 2015
Short description: | p2@B4galt6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B4galt6_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | 70bp_to_ENSMUST00000070080, NM_019737, uc008eeu.2_5end |
EntrezGene: | B4galt6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.21e-08 | 43 |
ectodermal cell | 1.23e-08 | 44 |
neurectodermal cell | 1.23e-08 | 44 |
neuron | 3.71e-08 | 33 |
neuronal stem cell | 3.71e-08 | 33 |
neuroblast | 3.71e-08 | 33 |
electrically signaling cell | 3.71e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.66e-20 | 75 |
central nervous system | 4.24e-20 | 73 |
ectoderm-derived structure | 2.01e-15 | 95 |
ectoderm | 2.01e-15 | 95 |
presumptive ectoderm | 2.01e-15 | 95 |
regional part of nervous system | 2.18e-14 | 54 |
neural tube | 2.93e-13 | 52 |
neural rod | 2.93e-13 | 52 |
future spinal cord | 2.93e-13 | 52 |
neural keel | 2.93e-13 | 52 |
neurectoderm | 3.35e-13 | 64 |
neural plate | 3.35e-13 | 64 |
presumptive neural plate | 3.35e-13 | 64 |
structure with developmental contribution from neural crest | 5.12e-13 | 92 |
brain | 6.53e-11 | 47 |
future brain | 6.53e-11 | 47 |
regional part of brain | 2.09e-10 | 46 |
ecto-epithelium | 2.93e-10 | 73 |
gray matter | 9.93e-10 | 34 |
anterior neural tube | 3.94e-09 | 40 |
regional part of forebrain | 1.05e-08 | 39 |
forebrain | 1.05e-08 | 39 |
future forebrain | 1.05e-08 | 39 |
pre-chordal neural plate | 3.39e-08 | 49 |
brain grey matter | 2.44e-07 | 29 |
regional part of telencephalon | 2.44e-07 | 29 |
telencephalon | 2.44e-07 | 29 |