FFCP PHASE1:Mm9::chr4:54960870..54960926,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:54960870..54960926,+
|short_description=p1@Zfp462
|description=CAGE_peak_1_at_Zfp462_5end
|association_with_transcript=22bp_to_ENSMUST00000098070_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=242466 | |EntrezGene=242466 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=321 | |||
|TSSclassifier=NA | |||
|UniProt=B1AWL2 | |UniProt=B1AWL2 | ||
|association_with_transcript=22bp_to_ENSMUST00000098070_5end | |||
|cluster_id=chr4:54960870..54960926,+ | |||
|description=CAGE_peak_1_at_Zfp462_5end | |||
|id=chr4:54960870..54960926,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.06e-18!33;CL:0000047!1.06e-18!33;CL:0000031!1.06e-18!33;CL:0000404!1.06e-18!33;CL:0000393!1.77e-14!39;CL:0000211!1.77e-14!39;CL:0000221!3.53e-14!44;CL:0000133!3.53e-14!44;CL:0002319!6.13e-14!43;CL:0000117!2.72e-13!23;CL:0000337!2.72e-13!23;CL:0000055!1.07e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.96e-19,33;CL:0000047,3.96e-19,33;CL:0000031,3.96e-19,33;CL:0000404,3.96e-19,33;CL:0000221,1.25e-14,44;CL:0000133,1.25e-14,44;CL:0000393,1.82e-14,39;CL:0000211,1.82e-14,39;CL:0002319,2.20e-14,43;CL:0000117,1.39e-13,23;CL:0000337,1.39e-13,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.42e-26!102;UBERON:0000924!5.42e-26!102;UBERON:0006601!5.42e-26!102;UBERON:0001017!8.98e-24!73;UBERON:0005743!8.98e-24!73;UBERON:0000073!2.09e-23!75;UBERON:0001016!2.09e-23!75;UBERON:0002346!8.37e-23!71;UBERON:0003075!8.37e-23!71;UBERON:0007284!8.37e-23!71;UBERON:0000033!1.18e-20!63;UBERON:0003056!2.62e-17!49;UBERON:0001049!4.38e-16!52;UBERON:0005068!4.38e-16!52;UBERON:0006241!4.38e-16!52;UBERON:0007135!4.38e-16!52;UBERON:0000955!3.20e-15!50;UBERON:0006238!3.20e-15!50;UBERON:0002616!1.05e-14!49;UBERON:0003080!2.08e-12!40;UBERON:0000468!2.60e-12!333;UBERON:0000153!4.68e-12!94;UBERON:0002780!7.33e-12!39;UBERON:0001890!7.33e-12!39;UBERON:0006240!7.33e-12!39;UBERON:0007811!8.42e-11!86;UBERON:0002020!2.93e-10!34;UBERON:0000922!8.79e-10!328;UBERON:0002791!3.35e-08!29;UBERON:0003528!3.35e-08!29;UBERON:0001893!3.35e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.01e-26,95;UBERON:0000924,5.01e-26,95;UBERON:0006601,5.01e-26,95;UBERON:0001017,1.79e-24,73;UBERON:0001016,4.28e-24,75;UBERON:0002346,1.43e-23,64;UBERON:0003075,1.43e-23,64;UBERON:0007284,1.43e-23,64;UBERON:0010371,4.51e-21,73;UBERON:0003056,1.07e-17,49;UBERON:0000073,2.27e-17,54;UBERON:0001049,1.91e-16,52;UBERON:0005068,1.91e-16,52;UBERON:0006241,1.91e-16,52;UBERON:0007135,1.91e-16,52;UBERON:0010314,5.11e-16,92;UBERON:0000955,3.37e-14,47;UBERON:0006238,3.37e-14,47;UBERON:0002616,1.11e-13,46;UBERON:0003080,1.12e-12,40;UBERON:0002780,4.07e-12,39;UBERON:0001890,4.07e-12,39;UBERON:0006240,4.07e-12,39;UBERON:0002020,1.78e-10,34;UBERON:0003528,2.29e-08,29;UBERON:0002791,2.29e-08,29;UBERON:0001893,2.29e-08,29;UBERON:0000922,1.12e-07,320 | |||
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| ||
|short_description=p1@Zfp462 | |||
}} | }} |
Latest revision as of 02:35, 27 September 2015
Short description: | p1@Zfp462 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp462_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | 22bp_to_ENSMUST00000098070_5end |
EntrezGene: | Zfp462 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.96e-19 | 33 |
neuronal stem cell | 3.96e-19 | 33 |
neuroblast | 3.96e-19 | 33 |
electrically signaling cell | 3.96e-19 | 33 |
ectodermal cell | 1.25e-14 | 44 |
neurectodermal cell | 1.25e-14 | 44 |
electrically responsive cell | 1.82e-14 | 39 |
electrically active cell | 1.82e-14 | 39 |
neural cell | 2.20e-14 | 43 |
CNS neuron (sensu Vertebrata) | 1.39e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 5.01e-26 | 95 |
ectoderm | 5.01e-26 | 95 |
presumptive ectoderm | 5.01e-26 | 95 |
central nervous system | 1.79e-24 | 73 |
nervous system | 4.28e-24 | 75 |
neurectoderm | 1.43e-23 | 64 |
neural plate | 1.43e-23 | 64 |
presumptive neural plate | 1.43e-23 | 64 |
ecto-epithelium | 4.51e-21 | 73 |
pre-chordal neural plate | 1.07e-17 | 49 |
regional part of nervous system | 2.27e-17 | 54 |
neural tube | 1.91e-16 | 52 |
neural rod | 1.91e-16 | 52 |
future spinal cord | 1.91e-16 | 52 |
neural keel | 1.91e-16 | 52 |
structure with developmental contribution from neural crest | 5.11e-16 | 92 |
brain | 3.37e-14 | 47 |
future brain | 3.37e-14 | 47 |
regional part of brain | 1.11e-13 | 46 |
anterior neural tube | 1.12e-12 | 40 |
regional part of forebrain | 4.07e-12 | 39 |
forebrain | 4.07e-12 | 39 |
future forebrain | 4.07e-12 | 39 |
gray matter | 1.78e-10 | 34 |
brain grey matter | 2.29e-08 | 29 |
regional part of telencephalon | 2.29e-08 | 29 |
telencephalon | 2.29e-08 | 29 |
embryo | 1.12e-07 | 320 |