FFCP PHASE1:Mm9::chr13:112476296..112476308,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=218613 | |EntrezGene=218613 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3UHF3 | |UniProt=Q3UHF3 | ||
|association_with_transcript=-77bp_to_ENSMUST00000109270,ENSMUST00000109272,NM_172593,uc007rvy.1_5end | |association_with_transcript=-77bp_to_ENSMUST00000109270,ENSMUST00000109272,NM_172593,uc007rvy.1_5end | ||
|cluster_id=chr13:112476296..112476308,+ | |||
|description=CAGE_peak_4_at_Mier3_5end | |description=CAGE_peak_4_at_Mier3_5end | ||
|id=chr13:112476296..112476308,+ | |id=chr13:112476296..112476308,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.61e-13,6;CL:0000677,3.61e-13,6;CL:0000584,3.61e-13,6;CL:0000075,3.00e-11,7;CL:0002027,6.18e-11,3;CL:0002006,6.18e-11,3;CL:0002024,6.18e-11,3;CL:0000682,9.64e-11,3;CL:0002563,1.10e-08,9;CL:0002251,1.10e-08,9;CL:0000066,3.86e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!3.65e-07!24 | |ontology_enrichment_uberon=UBERON:0004923!3.65e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,1.12e-13,24;UBERON:0002106,7.70e-13,6;UBERON:0004457,7.70e-13,6;UBERON:0000042,7.70e-13,6;UBERON:0004854,7.70e-13,6;UBERON:0009034,7.70e-13,6;UBERON:0002095,7.70e-13,6;UBERON:0004782,7.70e-13,6;UBERON:0003281,7.70e-13,6;UBERON:0009664,7.70e-13,6;UBERON:0002296,7.70e-13,6;UBERON:0005602,7.70e-13,6;UBERON:0001179,7.70e-13,6;UBERON:0006293,7.70e-13,6;UBERON:0003350,1.10e-08,9;UBERON:0004808,1.10e-08,9;UBERON:0001277,1.10e-08,9;UBERON:0005409,1.49e-08,47;UBERON:0001242,4.02e-08,13;UBERON:0001262,4.02e-08,13;UBERON:0004786,4.02e-08,13;UBERON:0003887,1.35e-07,10;UBERON:0000485,4.76e-07,11;UBERON:0000344,5.88e-07,15 | |||
|phase1_expression=0.480446541314382,4.18770489167233,3.18499467572675,0.60492842261366,1.50268718983904,2.68606835059024,2.10251376535973,0,0.985521055061667,0.468129052643987,0,0.0797721589953364,0,0,3.33109761815663,4.04950534779652,8.39474253753776,0,0,0.42438965179803,0.595303031057488,0.0992909512008853,0,0.159992422793407,0.68822784320151,2.8711598205751,3.4460959692726,4.09395342103189,1.14014051673824,0,0.443461021310609,0,0,0,0,0.332469290716985,0.408338712524738,0.418531630736908,0,0,0.588231488031014,0,0.485510353031154,0.125896817975577,0.405507724878058,0.367093504323363,0.782391344348039,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0.311068836925433,0,0,0,0,0.122490799214954,0.383381884072945,0,0,0.127687338085188,0,0.263772575460388,0.182975287204819,0,0,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,0,0,0,0.23517741427141,0.376999773989026,0.494389935468748,0.144599356919912,0.884610551949874,1.13236794963186,1.32504911076236,0.484875253135222,1.86391761218122,0,0,0,0.11981512450592,1.19980546198682,0.254140454146129,0,0,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,0.373220911830279,0,0.420883711772948,0.130120442962704,0,0.360124259610698,0.150704817835715,0.0680364991513279,0.12811372028485,0.655912071918102,0,0.215567992932842,0.567318240503458,0.527853372491847,0.219195732427575,0.278047249225598,0,0.411564272815887,0.398068533636986,0.702213187313235,0.257347907114715,0,0.621377317606506,0,0,0.23674473558521,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0,0,0,0,0.102904612379284,0.330418782983798,0.793351699990633,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.864552199498777,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0.505892296994058,0.738050739898011,0,0.246794327843601,0,0.667380422864376,0.982794975566015,1.57403478669398,0.608580364165509,0.482354319504834,1.2731292589071,0.287696137450811,0.972811360650212,2.19649130550465,0,0.372140947668503,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0.509235257325564,0.469380496577004,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0,0,0,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.42366414172764,0,0,0,0.180938774784468,0.119372344003136,0,0,0.18542530201051,2.39219233116994,0,1.11116716421827,6.40452753815949,2.59719032669948,1.60144721244566,0,0,0.138199973804424,0,0.316335993581135,0.406638934253697,0.324016022465404,0,0.218362563746178,0.539457385539283,0.41326727862668,0.26175594198403,1.29614973291793,0,3.38215763210514,0.299033092087958,0.165458490457098,0.194451188344048,0.774958940866387,0.168956125490778,0.234714477291508,0.651021924219751,3.35549902162275,3.38217769156408,2.30424005006292,0,0,0,0.25984164595559,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0.443971906748129,0,0.167884616364078,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0.37456602987953,0.320125762024346,0.287177344778066,0.952587382566147,0.463537303779422,0,0.412085900803307,0,0.342869252385415,0,0,0.436039249896986,0.376437521661322,0.338458431566706,0.182927972872773,0.526139422875686,0,0,0,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0.231867835620421 | |phase1_expression=0.480446541314382,4.18770489167233,3.18499467572675,0.60492842261366,1.50268718983904,2.68606835059024,2.10251376535973,0,0.985521055061667,0.468129052643987,0,0.0797721589953364,0,0,3.33109761815663,4.04950534779652,8.39474253753776,0,0,0.42438965179803,0.595303031057488,0.0992909512008853,0,0.159992422793407,0.68822784320151,2.8711598205751,3.4460959692726,4.09395342103189,1.14014051673824,0,0.443461021310609,0,0,0,0,0.332469290716985,0.408338712524738,0.418531630736908,0,0,0.588231488031014,0,0.485510353031154,0.125896817975577,0.405507724878058,0.367093504323363,0.782391344348039,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0.311068836925433,0,0,0,0,0.122490799214954,0.383381884072945,0,0,0.127687338085188,0,0.263772575460388,0.182975287204819,0,0,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,0,0,0,0.23517741427141,0.376999773989026,0.494389935468748,0.144599356919912,0.884610551949874,1.13236794963186,1.32504911076236,0.484875253135222,1.86391761218122,0,0,0,0.11981512450592,1.19980546198682,0.254140454146129,0,0,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,0.373220911830279,0,0.420883711772948,0.130120442962704,0,0.360124259610698,0.150704817835715,0.0680364991513279,0.12811372028485,0.655912071918102,0,0.215567992932842,0.567318240503458,0.527853372491847,0.219195732427575,0.278047249225598,0,0.411564272815887,0.398068533636986,0.702213187313235,0.257347907114715,0,0.621377317606506,0,0,0.23674473558521,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0,0,0,0,0.102904612379284,0.330418782983798,0.793351699990633,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.864552199498777,0.398282546508734,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0.505892296994058,0.738050739898011,0,0.246794327843601,0,0.667380422864376,0.982794975566015,1.57403478669398,0.608580364165509,0.482354319504834,1.2731292589071,0.287696137450811,0.972811360650212,2.19649130550465,0,0.372140947668503,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0.509235257325564,0.469380496577004,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0,0,0,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.42366414172764,0,0,0,0.180938774784468,0.119372344003136,0,0,0.18542530201051,2.39219233116994,0,1.11116716421827,6.40452753815949,2.59719032669948,1.60144721244566,0,0,0.138199973804424,0,0.316335993581135,0.406638934253697,0.324016022465404,0,0.218362563746178,0.539457385539283,0.41326727862668,0.26175594198403,1.29614973291793,0,3.38215763210514,0.299033092087958,0.165458490457098,0.194451188344048,0.774958940866387,0.168956125490778,0.234714477291508,0.651021924219751,3.35549902162275,3.38217769156408,2.30424005006292,0,0,0,0.25984164595559,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,0.443971906748129,0,0.167884616364078,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0,0.37456602987953,0.320125762024346,0.287177344778066,0.952587382566147,0.463537303779422,0,0.412085900803307,0,0.342869252385415,0,0,0.436039249896986,0.376437521661322,0.338458431566706,0.182927972872773,0.526139422875686,0,0,0,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0.231867835620421 | ||
|short_description=p4@Mier3 | |short_description=p4@Mier3 | ||
}} | }} |
Latest revision as of 02:43, 27 September 2015
Short description: | p4@Mier3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mier3_5end |
Coexpression cluster: | NA |
Association with transcript: | -77bp_to_ENSMUST00000109270, ENSMUST00000109272, NM_172593, uc007rvy.1_5end |
EntrezGene: | Mier3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.61e-13 | 6 |
gut absorptive cell | 3.61e-13 | 6 |
enterocyte | 3.61e-13 | 6 |
columnar/cuboidal epithelial cell | 3.00e-11 | 7 |
CD9-positive, CD41-positive megakaryocyte cell | 6.18e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 6.18e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 6.18e-11 | 3 |
M cell of gut | 9.64e-11 | 3 |
intestinal epithelial cell | 1.10e-08 | 9 |
epithelial cell of alimentary canal | 1.10e-08 | 9 |
epithelial cell | 3.86e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 1.12e-13 | 24 |
spleen | 7.70e-13 | 6 |
cavity lining | 7.70e-13 | 6 |
serous membrane | 7.70e-13 | 6 |
gastrointestinal system mesentery | 7.70e-13 | 6 |
stomach region | 7.70e-13 | 6 |
mesentery | 7.70e-13 | 6 |
gastrointestinal system serosa | 7.70e-13 | 6 |
mesentery of stomach | 7.70e-13 | 6 |
gut mesentery | 7.70e-13 | 6 |
dorsal mesentery | 7.70e-13 | 6 |
dorsal mesogastrium | 7.70e-13 | 6 |
peritoneal cavity | 7.70e-13 | 6 |
spleen primordium | 7.70e-13 | 6 |
epithelium of mucosa | 1.10e-08 | 9 |
gastrointestinal system epithelium | 1.10e-08 | 9 |
intestinal epithelium | 1.10e-08 | 9 |
gastrointestinal system | 1.49e-08 | 47 |
intestinal mucosa | 4.02e-08 | 13 |
wall of intestine | 4.02e-08 | 13 |
gastrointestinal system mucosa | 4.02e-08 | 13 |
intraembryonic coelom | 1.35e-07 | 10 |
simple columnar epithelium | 4.76e-07 | 11 |
mucosa | 5.88e-07 | 15 |