FFCP PHASE1:Mm9::chr18:24867937..24867948,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=225288|HGNC=|UniProt=Q76LL6,F8WHD7,E9Q1S4|association_with_transcript=0bp_to_ENSMUST00000037097,ENSMUST00000091991,ENSMUST00000115819,ENSMUST00000115820,ENSMUST00000169491,NM_175276,uc008eha.1,uc008ehb.1,uc008ehc.1,uc012bak.1_5end|description=CAGE_peak_3_at_Fhod3_5end|id=chr18:24867937..24867948,+|ontology_enrichment_celltype=CL:0000117!3.96e-11!23;CL:0000337!3.96e-11!23;CL:0000540!2.45e-10!33;CL:0000047!2.45e-10!33;CL:0000031!2.45e-10!33;CL:0000404!2.45e-10!33;CL:0000221!5.90e-10!44;CL:0000133!5.90e-10!44;CL:0002319!1.04e-09!43;CL:0000393!2.96e-08!39;CL:0000211!2.96e-08!39;CL:0000055!1.32e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.62e-16,23;CL:0000337,2.62e-16,23;CL:0000540,1.29e-11,33;CL:0000047,1.29e-11,33;CL:0000031,1.29e-11,33;CL:0000404,1.29e-11,33;CL:0000393,7.21e-10,39;CL:0000211,7.21e-10,39;CL:0002319,2.58e-08,43;CL:0000221,5.53e-08,44;CL:0000133,5.53e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.89e-20!102;UBERON:0000924!5.89e-20!102;UBERON:0006601!5.89e-20!102;UBERON:0000073!4.45e-18!75;UBERON:0001016!4.45e-18!75;UBERON:0001017!7.79e-18!73;UBERON:0005743!7.79e-18!73;UBERON:0002346!3.78e-16!71;UBERON:0003075!3.78e-16!71;UBERON:0007284!3.78e-16!71;UBERON:0002020!4.10e-16!34;UBERON:0001049!1.17e-15!52;UBERON:0005068!1.17e-15!52;UBERON:0006241!1.17e-15!52;UBERON:0007135!1.17e-15!52;UBERON:0003056!2.54e-14!49;UBERON:0000033!3.20e-14!63;UBERON:0002791!1.89e-13!29;UBERON:0003528!1.89e-13!29;UBERON:0001893!1.89e-13!29;UBERON:0000955!2.59e-13!50;UBERON:0006238!2.59e-13!50;UBERON:0002616!6.33e-13!49;UBERON:0003080!1.03e-12!40;UBERON:0002780!3.11e-12!39;UBERON:0001890!3.11e-12!39;UBERON:0006240!3.11e-12!39;UBERON:0000956!1.67e-10!21;UBERON:0001869!1.67e-10!21;UBERON:0000203!1.67e-10!21;UBERON:0003103!2.90e-10!43;UBERON:0000025!3.20e-10!114;UBERON:0007100!5.37e-10!18;UBERON:0000948!5.37e-10!18;UBERON:0005498!5.37e-10!18;UBERON:0004140!5.37e-10!18;UBERON:0009881!5.37e-10!18;UBERON:0004141!5.37e-10!18;UBERON:0003084!5.37e-10!18;UBERON:0007005!5.37e-10!18;UBERON:0004139!5.37e-10!18;UBERON:0004291!5.37e-10!18;UBERON:0004111!1.90e-09!122;UBERON:0002619!5.25e-08!17;UBERON:0000468!4.82e-07!333;UBERON:0002021!5.58e-07!10;UBERON:0000411!5.58e-07!10;UBERON:0001950!5.58e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.63e-22,92;UBERON:0002020,2.07e-18,34;UBERON:0007100,8.09e-16,18;UBERON:0000948,8.09e-16,18;UBERON:0005498,8.09e-16,18;UBERON:0004140,8.09e-16,18;UBERON:0009881,8.09e-16,18;UBERON:0004141,8.09e-16,18;UBERON:0003084,8.09e-16,18;UBERON:0007005,8.09e-16,18;UBERON:0004139,8.09e-16,18;UBERON:0004291,8.09e-16,18;UBERON:0003528,5.01e-15,29;UBERON:0002791,5.01e-15,29;UBERON:0001893,5.01e-15,29;UBERON:0000073,6.88e-15,54;UBERON:0001017,1.15e-14,73;UBERON:0001016,5.82e-14,75;UBERON:0001049,8.96e-14,52;UBERON:0005068,8.96e-14,52;UBERON:0006241,8.96e-14,52;UBERON:0007135,8.96e-14,52;UBERON:0004121,3.48e-13,95;UBERON:0000924,3.48e-13,95;UBERON:0006601,3.48e-13,95;UBERON:0002346,4.76e-13,64;UBERON:0003075,4.76e-13,64;UBERON:0007284,4.76e-13,64;UBERON:0010371,1.11e-12,73;UBERON:0003103,2.94e-12,43;UBERON:0000956,6.37e-12,21;UBERON:0001869,6.37e-12,21;UBERON:0000203,6.37e-12,21;UBERON:0003080,6.48e-12,40;UBERON:0000955,7.99e-12,47;UBERON:0006238,7.99e-12,47;UBERON:0000025,1.57e-11,114;UBERON:0002616,2.89e-11,46;UBERON:0003056,3.00e-11,49;UBERON:0004535,3.10e-11,23;UBERON:0001009,3.10e-11,23;UBERON:0002780,3.19e-11,39;UBERON:0001890,3.19e-11,39;UBERON:0006240,3.19e-11,39;UBERON:0004111,6.81e-10,122;UBERON:0002021,2.30e-09,10;UBERON:0000411,2.30e-09,10;UBERON:0001950,2.30e-09,10;UBERON:0002619,4.88e-08,17|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0.514518872071894,0,1.54701627683233,2.02316460859598,2.64495489636016,2.53532561402472,0,0,0,0,0,0.599200221036809,0,4.04389488003063,4.86021377994086,2.73422449756797,0.571301968807607,2.87129103237098,1.5923803897944,1.53352753629178,0.919218786610021,0,1.0214987046815,1.38245879930619,2.37395317914349,2.74462930807229,2.08365348222704,1.95428099300967,1.12552522006336,1.06958773443767,2.94628585473668,2.98980529678116,2.98239113320481,0.605809546665472,0.453429360640713,0.289864488701678,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.60289056221049,0.23517741427141,0,0,0,0,1.29413479957927,0.662524555381181,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0,0,0,1.64769703345305,0.457500602818626,0.753926112677186,1.91206752211504,2.30143911597297,1.0389402227978,0.162241263067758,0.407357455401265,0.373220911830279,0.505445516867349,1.05220927943237,0.390361328888111,0.689706313300419,0.180062129805349,0.30140963567143,0.748401490664606,0.896796041993948,1.49922759295566,3.10444044886819,0,0,0.351902248327898,0,0.556094498451196,1.74126083261083,0.61734640922383,0.59710280045548,0,0,0,1.44988040774851,1.17263029990548,2.52086886045421,3.07768156260773,3.73852040320067,2.93107514486019,3.25547522650571,3.48755421819505,5.3712057488898,4.11399624783701,3.447516745661,5.26947262048062,4.38599962275997,2.19550115291051,2.14730270016595,0.420579897128254,1.3377599609307,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.571242563048644,1.1270773567308,0.610953983535943,0.581857461502877,0.841629838683823,1.3279672796094,2.80459281161244,2.04098346193787,1.85095745882701,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.585400943573396,0.157635144106191,0.44292937929755,0.797273843287435,0,0.345369963731791,0,0,0,1.47529281905711,1.10374698521893,1.12385412991454,1.52375192569864,0,0.757412781613119,0,1.17131623288992,0.646270193198397,0.238968797952552,0.445597348164788,0,0.809621403349789,0.584511715822624,1.18586333383957,1.28528526568723,0.283880170416537,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0.643011105094777,0.354680467284547,0.713475270408282,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0.32977250588296,0.645857706783622,0.72375509913787,1.55184047204077,0.984845398470368,0,0.741701208042039,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0,0,0.209088296014469,0.218362563746178,0,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.5208175393758,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0.643105137237198,0,2.25900737046827,0.920650473014354,2.86447756719698,2.92150409984269,4.11049511862385,2.2661816921691,1.35004500046361,4.05289082901798,1.81256963593682,3.62432218226274,0.31136204275253,0.399024873401031,0.170733605754134,1.21553358534147,0.419226325255965,0.551530525350042,1.33348036680969,0.824140228955577,1.92551525755089,0.758091635291392,1.52087579934144,0.754505365544305,0.655490552289177,1.08842759088278,1.14870937911227,0.476293691283074,0.927074607558844,0.77163688185482,1.64834360321323,0.883193520806384,0.685738504770831,0.887379030796687,1.1921809497366,1.16277133305863,0.752875043322645,0.423073039458382,0.548783918618318,1.57841826862706,0.271608227691724,1.12228454331548,1.30498519936592,0.886540341380071,1.22769312950907,0.619747364743864,0.192906610981141,2.49810577937946,0.935726433781634,0.429742108096597,0.382576664137687,0,0.463735671240843|short_description=p3@Fhod3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225288 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q76LL6,F8WHD7,E9Q1S4 | |||
|association_with_transcript=0bp_to_ENSMUST00000037097,ENSMUST00000091991,ENSMUST00000115819,ENSMUST00000115820,ENSMUST00000169491,NM_175276,uc008eha.1,uc008ehb.1,uc008ehc.1,uc012bak.1_5end | |||
|cluster_id=chr18:24867937..24867948,+ | |||
|description=CAGE_peak_3_at_Fhod3_5end | |||
|id=chr18:24867937..24867948,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.96e-11!23;CL:0000337!3.96e-11!23;CL:0000540!2.45e-10!33;CL:0000047!2.45e-10!33;CL:0000031!2.45e-10!33;CL:0000404!2.45e-10!33;CL:0000221!5.90e-10!44;CL:0000133!5.90e-10!44;CL:0002319!1.04e-09!43;CL:0000393!2.96e-08!39;CL:0000211!2.96e-08!39;CL:0000055!1.32e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.62e-16,23;CL:0000337,2.62e-16,23;CL:0000540,1.29e-11,33;CL:0000047,1.29e-11,33;CL:0000031,1.29e-11,33;CL:0000404,1.29e-11,33;CL:0000393,7.21e-10,39;CL:0000211,7.21e-10,39;CL:0002319,2.58e-08,43;CL:0000221,5.53e-08,44;CL:0000133,5.53e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.89e-20!102;UBERON:0000924!5.89e-20!102;UBERON:0006601!5.89e-20!102;UBERON:0000073!4.45e-18!75;UBERON:0001016!4.45e-18!75;UBERON:0001017!7.79e-18!73;UBERON:0005743!7.79e-18!73;UBERON:0002346!3.78e-16!71;UBERON:0003075!3.78e-16!71;UBERON:0007284!3.78e-16!71;UBERON:0002020!4.10e-16!34;UBERON:0001049!1.17e-15!52;UBERON:0005068!1.17e-15!52;UBERON:0006241!1.17e-15!52;UBERON:0007135!1.17e-15!52;UBERON:0003056!2.54e-14!49;UBERON:0000033!3.20e-14!63;UBERON:0002791!1.89e-13!29;UBERON:0003528!1.89e-13!29;UBERON:0001893!1.89e-13!29;UBERON:0000955!2.59e-13!50;UBERON:0006238!2.59e-13!50;UBERON:0002616!6.33e-13!49;UBERON:0003080!1.03e-12!40;UBERON:0002780!3.11e-12!39;UBERON:0001890!3.11e-12!39;UBERON:0006240!3.11e-12!39;UBERON:0000956!1.67e-10!21;UBERON:0001869!1.67e-10!21;UBERON:0000203!1.67e-10!21;UBERON:0003103!2.90e-10!43;UBERON:0000025!3.20e-10!114;UBERON:0007100!5.37e-10!18;UBERON:0000948!5.37e-10!18;UBERON:0005498!5.37e-10!18;UBERON:0004140!5.37e-10!18;UBERON:0009881!5.37e-10!18;UBERON:0004141!5.37e-10!18;UBERON:0003084!5.37e-10!18;UBERON:0007005!5.37e-10!18;UBERON:0004139!5.37e-10!18;UBERON:0004291!5.37e-10!18;UBERON:0004111!1.90e-09!122;UBERON:0002619!5.25e-08!17;UBERON:0000468!4.82e-07!333;UBERON:0002021!5.58e-07!10;UBERON:0000411!5.58e-07!10;UBERON:0001950!5.58e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.63e-22,92;UBERON:0002020,2.07e-18,34;UBERON:0007100,8.09e-16,18;UBERON:0000948,8.09e-16,18;UBERON:0005498,8.09e-16,18;UBERON:0004140,8.09e-16,18;UBERON:0009881,8.09e-16,18;UBERON:0004141,8.09e-16,18;UBERON:0003084,8.09e-16,18;UBERON:0007005,8.09e-16,18;UBERON:0004139,8.09e-16,18;UBERON:0004291,8.09e-16,18;UBERON:0003528,5.01e-15,29;UBERON:0002791,5.01e-15,29;UBERON:0001893,5.01e-15,29;UBERON:0000073,6.88e-15,54;UBERON:0001017,1.15e-14,73;UBERON:0001016,5.82e-14,75;UBERON:0001049,8.96e-14,52;UBERON:0005068,8.96e-14,52;UBERON:0006241,8.96e-14,52;UBERON:0007135,8.96e-14,52;UBERON:0004121,3.48e-13,95;UBERON:0000924,3.48e-13,95;UBERON:0006601,3.48e-13,95;UBERON:0002346,4.76e-13,64;UBERON:0003075,4.76e-13,64;UBERON:0007284,4.76e-13,64;UBERON:0010371,1.11e-12,73;UBERON:0003103,2.94e-12,43;UBERON:0000956,6.37e-12,21;UBERON:0001869,6.37e-12,21;UBERON:0000203,6.37e-12,21;UBERON:0003080,6.48e-12,40;UBERON:0000955,7.99e-12,47;UBERON:0006238,7.99e-12,47;UBERON:0000025,1.57e-11,114;UBERON:0002616,2.89e-11,46;UBERON:0003056,3.00e-11,49;UBERON:0004535,3.10e-11,23;UBERON:0001009,3.10e-11,23;UBERON:0002780,3.19e-11,39;UBERON:0001890,3.19e-11,39;UBERON:0006240,3.19e-11,39;UBERON:0004111,6.81e-10,122;UBERON:0002021,2.30e-09,10;UBERON:0000411,2.30e-09,10;UBERON:0001950,2.30e-09,10;UBERON:0002619,4.88e-08,17 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0.514518872071894,0,1.54701627683233,2.02316460859598,2.64495489636016,2.53532561402472,0,0,0,0,0,0.599200221036809,0,4.04389488003063,4.86021377994086,2.73422449756797,0.571301968807607,2.87129103237098,1.5923803897944,1.53352753629178,0.919218786610021,0,1.0214987046815,1.38245879930619,2.37395317914349,2.74462930807229,2.08365348222704,1.95428099300967,1.12552522006336,1.06958773443767,2.94628585473668,2.98980529678116,2.98239113320481,0.605809546665472,0.453429360640713,0.289864488701678,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.60289056221049,0.23517741427141,0,0,0,0,1.29413479957927,0.662524555381181,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0,0,0,1.64769703345305,0.457500602818626,0.753926112677186,1.91206752211504,2.30143911597297,1.0389402227978,0.162241263067758,0.407357455401265,0.373220911830279,0.505445516867349,1.05220927943237,0.390361328888111,0.689706313300419,0.180062129805349,0.30140963567143,0.748401490664606,0.896796041993948,1.49922759295566,3.10444044886819,0,0,0.351902248327898,0,0.556094498451196,1.74126083261083,0.61734640922383,0.59710280045548,0,0,0,1.44988040774851,1.17263029990548,2.52086886045421,3.07768156260773,3.73852040320067,2.93107514486019,3.25547522650571,3.48755421819505,5.3712057488898,4.11399624783701,3.447516745661,5.26947262048062,4.38599962275997,2.19550115291051,2.14730270016595,0.420579897128254,1.3377599609307,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.571242563048644,1.1270773567308,0.610953983535943,0.581857461502877,0.841629838683823,1.3279672796094,2.80459281161244,2.04098346193787,1.85095745882701,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.585400943573396,0.157635144106191,0.44292937929755,0.797273843287435,0,0.345369963731791,0,0,0,1.47529281905711,1.10374698521893,1.12385412991454,1.52375192569864,0,0.757412781613119,0,1.17131623288992,0.646270193198397,0.238968797952552,0.445597348164788,0,0.809621403349789,0.584511715822624,1.18586333383957,1.28528526568723,0.283880170416537,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0.643011105094777,0.354680467284547,0.713475270408282,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0.32977250588296,0.645857706783622,0.72375509913787,1.55184047204077,0.984845398470368,0,0.741701208042039,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0,0,0.209088296014469,0.218362563746178,0,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.5208175393758,0.209718688851422,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0.643105137237198,0,2.25900737046827,0.920650473014354,2.86447756719698,2.92150409984269,4.11049511862385,2.2661816921691,1.35004500046361,4.05289082901798,1.81256963593682,3.62432218226274,0.31136204275253,0.399024873401031,0.170733605754134,1.21553358534147,0.419226325255965,0.551530525350042,1.33348036680969,0.824140228955577,1.92551525755089,0.758091635291392,1.52087579934144,0.754505365544305,0.655490552289177,1.08842759088278,1.14870937911227,0.476293691283074,0.927074607558844,0.77163688185482,1.64834360321323,0.883193520806384,0.685738504770831,0.887379030796687,1.1921809497366,1.16277133305863,0.752875043322645,0.423073039458382,0.548783918618318,1.57841826862706,0.271608227691724,1.12228454331548,1.30498519936592,0.886540341380071,1.22769312950907,0.619747364743864,0.192906610981141,2.49810577937946,0.935726433781634,0.429742108096597,0.382576664137687,0,0.463735671240843 | |||
|short_description=p3@Fhod3 | |||
}} |
Latest revision as of 02:56, 27 September 2015
Short description: | p3@Fhod3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fhod3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000037097, ENSMUST00000091991, ENSMUST00000115819, ENSMUST00000115820, ENSMUST00000169491, NM_175276, uc008eha.1, uc008ehb.1, uc008ehc.1, uc012bak.1_5end |
EntrezGene: | Fhod3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.62e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.62e-16 | 23 |
neuron | 1.29e-11 | 33 |
neuronal stem cell | 1.29e-11 | 33 |
neuroblast | 1.29e-11 | 33 |
electrically signaling cell | 1.29e-11 | 33 |
electrically responsive cell | 7.21e-10 | 39 |
electrically active cell | 7.21e-10 | 39 |
neural cell | 2.58e-08 | 43 |
ectodermal cell | 5.53e-08 | 44 |
neurectodermal cell | 5.53e-08 | 44 |