FFCP PHASE1:Mm9::chr15:79272502..79272536,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27373 | |EntrezGene=27373 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=A8Y308,Q9JMK2,A2ABP1 | |UniProt=A8Y308,Q9JMK2,A2ABP1 | ||
|association_with_transcript=-15bp_to_NM_013767,uc007wtl.2,uc011zwb.1_5end | |association_with_transcript=-15bp_to_NM_013767,uc007wtl.2,uc011zwb.1_5end | ||
|cluster_id=chr15:79272502..79272536,- | |||
|description=CAGE_peak_1_at_Csnk1e_5end | |description=CAGE_peak_1_at_Csnk1e_5end | ||
|id=chr15:79272502..79272536,- | |id=chr15:79272502..79272536,- | ||
|ontology_enrichment_celltype=CL:0002319!1.52e-20!43;CL:0000221!3.53e-20!44;CL:0000133!3.53e-20!44;CL:0000055!2.94e-17!50;CL:0000540!4.74e-17!33;CL:0000047!4.74e-17!33;CL:0000031!4.74e-17!33;CL:0000404!4.74e-17!33;CL:0000117!1.81e-14!23;CL:0000337!1.81e-14!23;CL:0000393!3.49e-14!39;CL:0000211!3.49e-14!39;CL:0002321!3.03e-11!70;CL:0000220!3.03e-11!70 | |ontology_enrichment_celltype=CL:0002319!1.52e-20!43;CL:0000221!3.53e-20!44;CL:0000133!3.53e-20!44;CL:0000055!2.94e-17!50;CL:0000540!4.74e-17!33;CL:0000047!4.74e-17!33;CL:0000031!4.74e-17!33;CL:0000404!4.74e-17!33;CL:0000117!1.81e-14!23;CL:0000337!1.81e-14!23;CL:0000393!3.49e-14!39;CL:0000211!3.49e-14!39;CL:0002321!3.03e-11!70;CL:0000220!3.03e-11!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.51e-20,43;CL:0000221,3.52e-20,44;CL:0000133,3.52e-20,44;CL:0000540,4.72e-17,33;CL:0000047,4.72e-17,33;CL:0000031,4.72e-17,33;CL:0000404,4.72e-17,33;CL:0000117,1.81e-14,23;CL:0000337,1.81e-14,23;CL:0000393,3.48e-14,39;CL:0000211,3.48e-14,39;CL:0002321,2.93e-11,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.07e-22!75;UBERON:0001016!1.07e-22!75;UBERON:0001017!9.62e-22!73;UBERON:0005743!9.62e-22!73;UBERON:0004121!2.32e-21!102;UBERON:0000924!2.32e-21!102;UBERON:0006601!2.32e-21!102;UBERON:0002346!2.10e-15!71;UBERON:0003075!2.10e-15!71;UBERON:0007284!2.10e-15!71;UBERON:0001049!5.13e-13!52;UBERON:0005068!5.13e-13!52;UBERON:0006241!5.13e-13!52;UBERON:0007135!5.13e-13!52;UBERON:0000033!2.46e-12!63;UBERON:0000955!1.02e-11!50;UBERON:0006238!1.02e-11!50;UBERON:0002020!2.04e-11!34;UBERON:0002616!2.36e-11!49;UBERON:0003056!2.77e-10!49;UBERON:0000153!2.70e-09!94;UBERON:0002780!2.81e-09!39;UBERON:0001890!2.81e-09!39;UBERON:0006240!2.81e-09!39;UBERON:0007811!2.93e-09!86;UBERON:0003080!2.99e-09!40;UBERON:0002791!1.09e-08!29;UBERON:0003528!1.09e-08!29;UBERON:0001893!1.09e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.07e-22,75;UBERON:0001017,9.58e-22,73;UBERON:0004121,5.25e-21,95;UBERON:0000924,5.25e-21,95;UBERON:0006601,5.25e-21,95;UBERON:0002346,2.69e-15,64;UBERON:0003075,2.69e-15,64;UBERON:0007284,2.69e-15,64;UBERON:0010314,1.88e-14,92;UBERON:0000073,4.51e-14,54;UBERON:0001049,5.12e-13,52;UBERON:0005068,5.12e-13,52;UBERON:0006241,5.12e-13,52;UBERON:0007135,5.12e-13,52;UBERON:0010371,1.14e-12,73;UBERON:0002020,2.03e-11,34;UBERON:0000955,2.53e-10,47;UBERON:0006238,2.53e-10,47;UBERON:0003056,2.76e-10,49;UBERON:0002616,5.71e-10,46;UBERON:0002780,2.81e-09,39;UBERON:0001890,2.81e-09,39;UBERON:0006240,2.81e-09,39;UBERON:0003080,2.98e-09,40;UBERON:0003528,1.09e-08,29;UBERON:0002791,1.09e-08,29;UBERON:0001893,1.09e-08,29 | |||
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| ||
|short_description=p1@Csnk1e | |short_description=p1@Csnk1e | ||
}} | }} |
Latest revision as of 03:00, 27 September 2015
Short description: | p1@Csnk1e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Csnk1e_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -15bp_to_NM_013767, uc007wtl.2, uc011zwb.1_5end |
EntrezGene: | Csnk1e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.51e-20 | 43 |
ectodermal cell | 3.52e-20 | 44 |
neurectodermal cell | 3.52e-20 | 44 |
neuron | 4.72e-17 | 33 |
neuronal stem cell | 4.72e-17 | 33 |
neuroblast | 4.72e-17 | 33 |
electrically signaling cell | 4.72e-17 | 33 |
CNS neuron (sensu Vertebrata) | 1.81e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.81e-14 | 23 |
electrically responsive cell | 3.48e-14 | 39 |
electrically active cell | 3.48e-14 | 39 |
embryonic cell | 2.93e-11 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.07e-22 | 75 |
central nervous system | 9.58e-22 | 73 |
ectoderm-derived structure | 5.25e-21 | 95 |
ectoderm | 5.25e-21 | 95 |
presumptive ectoderm | 5.25e-21 | 95 |
neurectoderm | 2.69e-15 | 64 |
neural plate | 2.69e-15 | 64 |
presumptive neural plate | 2.69e-15 | 64 |
structure with developmental contribution from neural crest | 1.88e-14 | 92 |
regional part of nervous system | 4.51e-14 | 54 |
neural tube | 5.12e-13 | 52 |
neural rod | 5.12e-13 | 52 |
future spinal cord | 5.12e-13 | 52 |
neural keel | 5.12e-13 | 52 |
ecto-epithelium | 1.14e-12 | 73 |
gray matter | 2.03e-11 | 34 |
brain | 2.53e-10 | 47 |
future brain | 2.53e-10 | 47 |
pre-chordal neural plate | 2.76e-10 | 49 |
regional part of brain | 5.71e-10 | 46 |
regional part of forebrain | 2.81e-09 | 39 |
forebrain | 2.81e-09 | 39 |
future forebrain | 2.81e-09 | 39 |
anterior neural tube | 2.98e-09 | 40 |
brain grey matter | 1.09e-08 | 29 |
regional part of telencephalon | 1.09e-08 | 29 |
telencephalon | 1.09e-08 | 29 |