FFCP PHASE1:Mm9::chr9:74709682..74709691,+: Difference between revisions
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{{FFCP|EntrezGene=15379|HGNC=|MCL_coexpression_id=1808|UniProt=O08755|association_with_transcript=-36bp_to_ENSMUST00000056006,NM_008262,uc009qrh.1_5end|description=CAGE_peak_3_at_Onecut1_5end|id=chr9:74709682..74709691,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,3.66e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.05e-17!22;UBERON:0007499!2.05e-17!22;UBERON:0006925!2.05e-17!22;UBERON:0009497!2.05e-17!22;UBERON:0000015!2.05e-17!22;UBERON:0002423!2.05e-17!22;UBERON:0006235!2.05e-17!22;UBERON:0008835!2.05e-17!22;UBERON:0003894!2.05e-17!22;UBERON:0004161!2.05e-17!22;UBERON:0008836!2.05e-17!22;UBERON:0009854!2.78e-16!23;UBERON:0009856!2.78e-16!23;UBERON:0002365!2.65e-14!25;UBERON:0002330!2.65e-14!25;UBERON:0001264!3.48e-12!12;UBERON:0003922!3.48e-12!12;UBERON:0002114!3.48e-12!12;UBERON:0003923!3.48e-12!12;UBERON:0003924!3.48e-12!12;UBERON:0003921!3.48e-12!12;UBERON:0000949!1.33e-11!72;UBERON:0001045!6.93e-11!13;UBERON:0005177!1.14e-08!85;UBERON:0002108!5.29e-08!16;UBERON:0002075!6.19e-07!19|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.02e-25,22;UBERON:0007499,2.02e-25,22;UBERON:0006925,2.02e-25,22;UBERON:0009497,2.02e-25,22;UBERON:0000015,2.02e-25,22;UBERON:0002423,2.02e-25,22;UBERON:0006235,2.02e-25,22;UBERON:0008835,2.02e-25,22;UBERON:0003894,2.02e-25,22;UBERON:0004161,2.02e-25,22;UBERON:0008836,2.02e-25,22;UBERON:0001264,7.95e-25,12;UBERON:0009854,3.98e-24,23;UBERON:0009856,3.98e-24,23;UBERON:0002365,7.53e-22,25;UBERON:0002330,7.53e-22,25;UBERON:0000949,1.52e-19,72;UBERON:0005177,3.51e-17,79;UBERON:0002075,1.26e-14,19;UBERON:0002100,3.24e-14,90;UBERON:0005256,2.89e-10,45;UBERON:0003914,1.17e-09,47;UBERON:0005172,4.25e-09,49;UBERON:0005173,4.25e-09,49;UBERON:0002417,4.25e-09,49;UBERON:0000916,4.25e-09,49;UBERON:0003929,1.13e-07,55;UBERON:0000970,1.49e-07,9;UBERON:0000019,1.49e-07,9;UBERON:0000047,1.49e-07,9;UBERON:0010312,1.49e-07,9;UBERON:0004088,1.49e-07,9;UBERON:0002104,1.49e-07,9;UBERON:0001456,1.49e-07,9;UBERON:0003072,1.49e-07,9;UBERON:0004128,1.49e-07,9;UBERON:0003071,1.49e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0.383062014255563,0.153606533256243,1.58263545276233,0.914876436024097,3.64639359389732,0,0,0.30559649555362,0,0.854230084794618,0.931997229126503,0,0,3.18850937571846,3.44169550792555,0,5.39703191637817,16.8941868536394,13.8888335000174,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,0.125654352112864,0,0,0.20778804455956,0,0,0,0,0,1.43132487258974,1.37941262660084,1.80062129805349,1.80845781402858,1.2246569847239,1.40925092313335,0.468508622798644,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,4.15033677922008,0.500535317148282,1.17935397067922,0.899448449539415,0.811440485554012,1.20588579876208,1.01850340712568,4.31544206176216,3.89124544260085,1.09824565275233,1.43768206527355,1.48856379067401,5.30464044294753,0.505157755894224,4.66433275156972,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,6.63725691699814,3.39892890616974,4.53485335447127,2.82907619633847,3.83892460745005,3.68922177532713,1.29214146584111,3.27180356529755,4.63446591900138,2.21225730555071,1.05418608574999,4.12542172992747,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0.218362563746178,0.404593039154462,0.495920734352016,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.764384908931,0.399024873401031,0.170733605754134,0,0.419226325255965,0.919217542250071,0.666740183404846,0.412070114477788,0.320919209591815,0,0.50695859978048,0.377252682772152,0.468207537349412,0.448176066834085,1.03383844120104,0,0.811190281613988,0.77163688185482,0.412085900803307,0.294397840268795,0,0.354951612318675,0.715308569841963,0.581385666529314,0.564656282491984,0.338458431566706,0.182927972872773,0,1.22223702461276,0,0.593175090620871,0.29551344712669,0.409231043169689,0.619747364743864,0.771626443924566,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0|short_description=p3@Onecut1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15379 | |||
|HGNC= | |||
|MCL_coexpression_id=1808 | |||
|TSSclassifier=NA | |||
|UniProt=O08755 | |||
|association_with_transcript=-36bp_to_ENSMUST00000056006,NM_008262,uc009qrh.1_5end | |||
|cluster_id=chr9:74709682..74709691,+ | |||
|description=CAGE_peak_3_at_Onecut1_5end | |||
|id=chr9:74709682..74709691,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.66e-08,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.05e-17!22;UBERON:0007499!2.05e-17!22;UBERON:0006925!2.05e-17!22;UBERON:0009497!2.05e-17!22;UBERON:0000015!2.05e-17!22;UBERON:0002423!2.05e-17!22;UBERON:0006235!2.05e-17!22;UBERON:0008835!2.05e-17!22;UBERON:0003894!2.05e-17!22;UBERON:0004161!2.05e-17!22;UBERON:0008836!2.05e-17!22;UBERON:0009854!2.78e-16!23;UBERON:0009856!2.78e-16!23;UBERON:0002365!2.65e-14!25;UBERON:0002330!2.65e-14!25;UBERON:0001264!3.48e-12!12;UBERON:0003922!3.48e-12!12;UBERON:0002114!3.48e-12!12;UBERON:0003923!3.48e-12!12;UBERON:0003924!3.48e-12!12;UBERON:0003921!3.48e-12!12;UBERON:0000949!1.33e-11!72;UBERON:0001045!6.93e-11!13;UBERON:0005177!1.14e-08!85;UBERON:0002108!5.29e-08!16;UBERON:0002075!6.19e-07!19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.02e-25,22;UBERON:0007499,2.02e-25,22;UBERON:0006925,2.02e-25,22;UBERON:0009497,2.02e-25,22;UBERON:0000015,2.02e-25,22;UBERON:0002423,2.02e-25,22;UBERON:0006235,2.02e-25,22;UBERON:0008835,2.02e-25,22;UBERON:0003894,2.02e-25,22;UBERON:0004161,2.02e-25,22;UBERON:0008836,2.02e-25,22;UBERON:0001264,7.95e-25,12;UBERON:0009854,3.98e-24,23;UBERON:0009856,3.98e-24,23;UBERON:0002365,7.53e-22,25;UBERON:0002330,7.53e-22,25;UBERON:0000949,1.52e-19,72;UBERON:0005177,3.51e-17,79;UBERON:0002075,1.26e-14,19;UBERON:0002100,3.24e-14,90;UBERON:0005256,2.89e-10,45;UBERON:0003914,1.17e-09,47;UBERON:0005172,4.25e-09,49;UBERON:0005173,4.25e-09,49;UBERON:0002417,4.25e-09,49;UBERON:0000916,4.25e-09,49;UBERON:0003929,1.13e-07,55;UBERON:0000970,1.49e-07,9;UBERON:0000019,1.49e-07,9;UBERON:0000047,1.49e-07,9;UBERON:0010312,1.49e-07,9;UBERON:0004088,1.49e-07,9;UBERON:0002104,1.49e-07,9;UBERON:0001456,1.49e-07,9;UBERON:0003072,1.49e-07,9;UBERON:0004128,1.49e-07,9;UBERON:0003071,1.49e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0.383062014255563,0.153606533256243,1.58263545276233,0.914876436024097,3.64639359389732,0,0,0.30559649555362,0,0.854230084794618,0.931997229126503,0,0,3.18850937571846,3.44169550792555,0,5.39703191637817,16.8941868536394,13.8888335000174,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,0.125654352112864,0,0,0.20778804455956,0,0,0,0,0,1.43132487258974,1.37941262660084,1.80062129805349,1.80845781402858,1.2246569847239,1.40925092313335,0.468508622798644,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,4.15033677922008,0.500535317148282,1.17935397067922,0.899448449539415,0.811440485554012,1.20588579876208,1.01850340712568,4.31544206176216,3.89124544260085,1.09824565275233,1.43768206527355,1.48856379067401,5.30464044294753,0.505157755894224,4.66433275156972,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,6.63725691699814,3.39892890616974,4.53485335447127,2.82907619633847,3.83892460745005,3.68922177532713,1.29214146584111,3.27180356529755,4.63446591900138,2.21225730555071,1.05418608574999,4.12542172992747,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0.218362563746178,0.404593039154462,0.495920734352016,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.764384908931,0.399024873401031,0.170733605754134,0,0.419226325255965,0.919217542250071,0.666740183404846,0.412070114477788,0.320919209591815,0,0.50695859978048,0.377252682772152,0.468207537349412,0.448176066834085,1.03383844120104,0,0.811190281613988,0.77163688185482,0.412085900803307,0.294397840268795,0,0.354951612318675,0.715308569841963,0.581385666529314,0.564656282491984,0.338458431566706,0.182927972872773,0,1.22223702461276,0,0.593175090620871,0.29551344712669,0.409231043169689,0.619747364743864,0.771626443924566,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Onecut1 | |||
}} |
Latest revision as of 03:09, 27 September 2015
Short description: | p3@Onecut1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Onecut1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1808 |
Association with transcript: | -36bp_to_ENSMUST00000056006, NM_008262, uc009qrh.1_5end |
EntrezGene: | Onecut1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.66e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 2.02e-25 | 22 |
epithelial sac | 2.02e-25 | 22 |
digestive gland | 2.02e-25 | 22 |
epithelium of foregut-midgut junction | 2.02e-25 | 22 |
anatomical boundary | 2.02e-25 | 22 |
hepatobiliary system | 2.02e-25 | 22 |
foregut-midgut junction | 2.02e-25 | 22 |
hepatic diverticulum | 2.02e-25 | 22 |
liver primordium | 2.02e-25 | 22 |
septum transversum | 2.02e-25 | 22 |
liver bud | 2.02e-25 | 22 |
pancreas | 7.95e-25 | 12 |
digestive tract diverticulum | 3.98e-24 | 23 |
sac | 3.98e-24 | 23 |
exocrine gland | 7.53e-22 | 25 |
exocrine system | 7.53e-22 | 25 |
endocrine system | 1.52e-19 | 72 |
trunk region element | 3.51e-17 | 79 |
viscus | 1.26e-14 | 19 |
trunk | 3.24e-14 | 90 |
trunk mesenchyme | 2.89e-10 | 45 |
epithelial tube | 1.17e-09 | 47 |
abdomen element | 4.25e-09 | 49 |
abdominal segment element | 4.25e-09 | 49 |
abdominal segment of trunk | 4.25e-09 | 49 |
abdomen | 4.25e-09 | 49 |
gut epithelium | 1.13e-07 | 55 |
eye | 1.49e-07 | 9 |
camera-type eye | 1.49e-07 | 9 |
simple eye | 1.49e-07 | 9 |
immature eye | 1.49e-07 | 9 |
ocular region | 1.49e-07 | 9 |
visual system | 1.49e-07 | 9 |
face | 1.49e-07 | 9 |
optic cup | 1.49e-07 | 9 |
optic vesicle | 1.49e-07 | 9 |
eye primordium | 1.49e-07 | 9 |