Personal tools

FFCP PHASE1:Mm9::chr18:31607037..31607061,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20983
|EntrezGene=20983
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P40749,Q571C5
|UniProt=P40749,Q571C5
|association_with_transcript=7bp_to_ENSMUST00000025110,ENSMUST00000165336,NM_009308,uc008ehy.1_5end
|association_with_transcript=7bp_to_ENSMUST00000025110,ENSMUST00000165336,NM_009308,uc008ehy.1_5end
|cluster_id=chr18:31607037..31607061,-
|description=CAGE_peak_2_at_Syt4_5end
|description=CAGE_peak_2_at_Syt4_5end
|id=chr18:31607037..31607061,-
|id=chr18:31607037..31607061,-
|ontology_enrichment_celltype=CL:0000540!1.09e-18!33;CL:0000047!1.09e-18!33;CL:0000031!1.09e-18!33;CL:0000404!1.09e-18!33;CL:0000117!2.83e-15!23;CL:0000337!2.83e-15!23;CL:0000221!1.65e-14!44;CL:0000133!1.65e-14!44;CL:0002319!1.65e-14!43;CL:0000393!3.38e-13!39;CL:0000211!3.38e-13!39;CL:0000055!4.33e-10!50
|ontology_enrichment_celltype=CL:0000540!1.09e-18!33;CL:0000047!1.09e-18!33;CL:0000031!1.09e-18!33;CL:0000404!1.09e-18!33;CL:0000117!2.83e-15!23;CL:0000337!2.83e-15!23;CL:0000221!1.65e-14!44;CL:0000133!1.65e-14!44;CL:0002319!1.65e-14!43;CL:0000393!3.38e-13!39;CL:0000211!3.38e-13!39;CL:0000055!4.33e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.20e-20,33;CL:0000047,1.20e-20,33;CL:0000031,1.20e-20,33;CL:0000404,1.20e-20,33;CL:0000117,1.85e-17,23;CL:0000337,1.85e-17,23;CL:0000393,2.52e-15,39;CL:0000211,2.52e-15,39;CL:0002319,4.54e-15,43;CL:0000221,2.08e-14,44;CL:0000133,2.08e-14,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!9.33e-36!102;UBERON:0000924!9.33e-36!102;UBERON:0006601!9.33e-36!102;UBERON:0000073!4.07e-34!75;UBERON:0001016!4.07e-34!75;UBERON:0001017!7.63e-33!73;UBERON:0005743!7.63e-33!73;UBERON:0002346!4.99e-32!71;UBERON:0003075!4.99e-32!71;UBERON:0007284!4.99e-32!71;UBERON:0001049!1.56e-25!52;UBERON:0005068!1.56e-25!52;UBERON:0006241!1.56e-25!52;UBERON:0007135!1.56e-25!52;UBERON:0000033!5.63e-25!63;UBERON:0000955!3.08e-24!50;UBERON:0006238!3.08e-24!50;UBERON:0002616!1.25e-23!49;UBERON:0003056!2.55e-22!49;UBERON:0003080!8.16e-20!40;UBERON:0002020!4.64e-19!34;UBERON:0002780!4.71e-19!39;UBERON:0001890!4.71e-19!39;UBERON:0006240!4.71e-19!39;UBERON:0002791!1.24e-15!29;UBERON:0003528!1.24e-15!29;UBERON:0001893!1.24e-15!29;UBERON:0007811!6.27e-12!86;UBERON:0000956!1.28e-10!21;UBERON:0001869!1.28e-10!21;UBERON:0000203!1.28e-10!21;UBERON:0000153!2.92e-09!94;UBERON:0002619!1.36e-08!17;UBERON:0002021!3.41e-08!10;UBERON:0000411!3.41e-08!10;UBERON:0001950!3.41e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.03e-37,75;UBERON:0001017,5.84e-36,73;UBERON:0004121,8.38e-34,95;UBERON:0000924,8.38e-34,95;UBERON:0006601,8.38e-34,95;UBERON:0002346,1.31e-33,64;UBERON:0003075,1.31e-33,64;UBERON:0007284,1.31e-33,64;UBERON:0000073,2.60e-31,54;UBERON:0001049,2.94e-29,52;UBERON:0005068,2.94e-29,52;UBERON:0006241,2.94e-29,52;UBERON:0007135,2.94e-29,52;UBERON:0010371,5.75e-28,73;UBERON:0003056,3.04e-25,49;UBERON:0000955,5.20e-25,47;UBERON:0006238,5.20e-25,47;UBERON:0002616,2.53e-24,46;UBERON:0003080,4.35e-23,40;UBERON:0002020,3.12e-22,34;UBERON:0002780,3.35e-22,39;UBERON:0001890,3.35e-22,39;UBERON:0006240,3.35e-22,39;UBERON:0010314,1.16e-21,92;UBERON:0003528,3.04e-18,29;UBERON:0002791,3.04e-18,29;UBERON:0001893,3.04e-18,29;UBERON:0000956,2.09e-12,21;UBERON:0001869,2.09e-12,21;UBERON:0000203,2.09e-12,21;UBERON:0002619,4.72e-10,17;UBERON:0002021,2.98e-09,10;UBERON:0000411,2.98e-09,10;UBERON:0001950,2.98e-09,10;UBERON:0002420,3.99e-07,8;UBERON:0007245,3.99e-07,8;UBERON:0010009,3.99e-07,8;UBERON:0010011,3.99e-07,8;UBERON:0000454,3.99e-07,8
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,37.8331781807448,50.2541430308431,33.5930643858275,0,0,0,0,0,0.299600110518405,0.384218305321555,19.4936471139938,15.7956947848078,16.8259969081106,19.4242669394586,24.9581451275323,26.2130310320002,20.9901581529938,16.5459381589804,55.0579404996944,53.5009946576937,64.5147439676223,35.2136388239618,48.2139881784699,36.98484930953,48.0194758282375,46.1465340225978,56.6881499251965,72.1840034410486,56.9486723196412,66.9174010512829,23.2479413532875,19.8753203080846,0,0,0,0.539703191637817,0,0,3.37066608316204,0,0,0,0.985903938436763,0,0,0,0,0,0,2.2836775943812,0,9.20341262201914,2.08182392119363,7.91610243611567,3.22861696158482,8.74191315205211,9.40709657085639,3.14166478324189,0,0.144599356919912,0,0,0,0,1.86391761218122,53.2861050561016,46.0782754989601,0,0,0,0,55.2727459403796,43.9200578705881,30.4083532113132,49.018458294222,41.6816195448439,63.5831416352254,36.3420429271777,0,0,0,5.26104639716185,0.520481771850815,6.66716102857071,7.74267158163002,12.0563854268572,9.18492738542926,9.86475646193343,8.62055865949505,12.9351685369508,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,43.3197294042102,44.5576971602302,0,0.264450566663544,0.426576501070468,0.232236671860439,0.902072229254653,1.21010114774006,1.11189021922435,1.14135375667535,0.949058123089023,1.15289268306808,0.502670417600539,1.59165177632921,1.36474860983384,0,0.648414149624083,0.796565093017469,0.189667900953082,1.14248512609729,1.1270773567308,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0,45.5963675565329,35.9839877838064,0,0,11.3582958989852,14.8366722832723,23.2657269551423,11.709471099675,18.2694912747563,18.6830510320629,4.85772842009873,12.2747460322751,13.0444966722353,31.8108103257589,0,0,0,0,0,0.242780636154981,0,0.565815239267694,0.590603785761546,0.614870295887855,0,0,1.06949213515416,0.632073515871632,0,1.03135543248187,79.6628677463864,2.88097750450096,1.16422815404479,2.57204442037911,7.62563004661776,8.20496560969525,10.2020392773315,7.61162372786498,0,0,1.98475558249466,0.16488625294148,0.807322133479528,1.14594557363496,1.07435109602823,0.820704498725306,0.874442509889552,38.0121869121545,0,0,0,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.756037385752609,1.67270636811575,0.655087691238533,1.07891477107857,1.23980183588004,1.04702376793612,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73870634628971,0,0,0.428736758158132,0,50.2629139929189,45.5721984142105,50.9877006961063,35.0580491981123,47.2706938641743,41.5466643564335,49.2766425169218,74.3029985319964,65.7056493027097,57.9891549162038,1.14166082342594,3.99024873401031,4.09760653809922,7.77941494618541,5.03071590307158,6.25067928730048,9.11211583986622,9.47761263298913,6.4183841918363,8.08631077644152,8.11133759648767,9.24269072791773,9.73871677686777,8.32326981263301,9.64915878454303,7.62069906052918,7.76424983830532,8.10218725947561,6.1812885120496,8.97913412819824,5.82877729055206,8.69631450180754,6.91464950847231,8.72078499793971,7.9992973353031,9.13837765230106,9.69518256225695,7.10288220882176,10.1853085384396,8.97827634652382,6.16902094245706,7.2893316957917,10.2307760792422,7.7468420592983,5.40138510747196,10.7418548513317,5.14649538579898,5.58664740525576,3.06061331310149,1.32354851471709,0.927471342481686
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,37.8331781807448,50.2541430308431,33.5930643858275,0,0,0,0,0,0.299600110518405,0.384218305321555,19.4936471139938,15.7956947848078,16.8259969081106,19.4242669394586,24.9581451275323,26.2130310320002,20.9901581529938,16.5459381589804,55.0579404996944,53.5009946576937,64.5147439676223,35.2136388239618,48.2139881784699,36.98484930953,48.0194758282375,46.1465340225978,56.6881499251965,72.1840034410486,56.9486723196412,66.9174010512829,23.2479413532875,19.8753203080846,0,0,0,0.539703191637817,0,0,3.37066608316204,0,0,0,0.985903938436763,0,0,0,0,0,0,2.2836775943812,0,9.20341262201914,2.08182392119363,7.91610243611567,3.22861696158482,8.74191315205211,9.40709657085639,3.14166478324189,0,0.144599356919912,0,0,0,0,1.86391761218122,53.2861050561016,46.0782754989601,0,0,0,0,55.2727459403796,43.9200578705881,30.4083532113132,49.018458294222,41.6816195448439,63.5831416352254,36.3420429271777,0,0,0,5.26104639716185,0.520481771850815,6.66716102857071,7.74267158163002,12.0563854268572,9.18492738542926,9.86475646193343,8.62055865949505,12.9351685369508,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,43.3197294042102,44.5576971602302,0,0.264450566663544,0.426576501070468,0.232236671860439,0.902072229254653,1.21010114774006,1.11189021922435,1.14135375667535,0.949058123089023,1.15289268306808,0.502670417600539,1.59165177632921,1.36474860983384,0,0.648414149624083,0.796565093017469,0.189667900953082,1.14248512609729,1.1270773567308,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0,45.5963675565329,35.9839877838064,0,0,11.3582958989852,14.8366722832723,23.2657269551423,11.709471099675,18.2694912747563,18.6830510320629,4.85772842009873,12.2747460322751,13.0444966722353,31.8108103257589,0,0,0,0,0,0.242780636154981,0,0.565815239267694,0.590603785761546,0.614870295887855,0,0,1.06949213515416,0.632073515871632,0,1.03135543248187,79.6628677463864,2.88097750450096,1.16422815404479,2.57204442037911,7.62563004661776,8.20496560969525,10.2020392773315,7.61162372786498,0,0,1.98475558249466,0.16488625294148,0.807322133479528,1.14594557363496,1.07435109602823,0.820704498725306,0.874442509889552,38.0121869121545,0,0,0,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.756037385752609,1.67270636811575,0.655087691238533,1.07891477107857,1.23980183588004,1.04702376793612,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73870634628971,0,0,0.428736758158132,0,50.2629139929189,45.5721984142105,50.9877006961063,35.0580491981123,47.2706938641743,41.5466643564335,49.2766425169218,74.3029985319964,65.7056493027097,57.9891549162038,1.14166082342594,3.99024873401031,4.09760653809922,7.77941494618541,5.03071590307158,6.25067928730048,9.11211583986622,9.47761263298913,6.4183841918363,8.08631077644152,8.11133759648767,9.24269072791773,9.73871677686777,8.32326981263301,9.64915878454303,7.62069906052918,7.76424983830532,8.10218725947561,6.1812885120496,8.97913412819824,5.82877729055206,8.69631450180754,6.91464950847231,8.72078499793971,7.9992973353031,9.13837765230106,9.69518256225695,7.10288220882176,10.1853085384396,8.97827634652382,6.16902094245706,7.2893316957917,10.2307760792422,7.7468420592983,5.40138510747196,10.7418548513317,5.14649538579898,5.58664740525576,3.06061331310149,1.32354851471709,0.927471342481686
|short_description=p2@Syt4
|short_description=p2@Syt4
}}
}}

Latest revision as of 03:17, 27 September 2015

Short description:p2@Syt4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Syt4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 7bp_to_ENSMUST00000025110, ENSMUST00000165336, NM_009308, uc008ehy.1_5end
EntrezGene:Syt4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Syt4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C337.83
Mouse Granule cells, donor2.CNhs12357.11731-123E350.25
Mouse Granule cells, donor3.CNhs12108.11636-122C733.59
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D226.21
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.99
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D355.06
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F353.50
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D764.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D435.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F448.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D836.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E448.02
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E546.15
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I656.69
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D672.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F656.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E166.92
Mouse Schwann, donor1.CNhs12507.11728-123D923.25
Mouse Schwann, donor2.CNhs12573.11746-123F919.88
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D79.20
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F58.74
adrenal gland, neonate N00.CNhs11191.1311-23C19.41
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B253.29
cerebellum, neonate N30.CNhs11135.1395-42I246.08
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A455.27
corpus striatum, adult.CNhs10487.19-21D843.92
corpus striatum, neonate N00.CNhs11226.630-43F130.41
cortex, adult.CNhs10473.12-14D549.02
cortex, neonate N30.CNhs11107.1392-42F241.68
diencephalon, adult.CNhs10482.20-12F263.58
diencephalon, neonate N30.CNhs11201.1388-42B236.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D412.06
eyeball, neonate N00.CNhs11207.633-15C69.18
eyeball, neonate N01.CNhs11140.1532-43E79.86
eyeball, neonate N02.CNhs11205.1551-44G88.62
eyeball, neonate N16.CNhs11188.777-19A212.94
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E843.32
hippocampus, neonate N00.CNhs11228.627-43G144.56
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C245.60
medulla oblongata, neonate N30.CNhs11200.1396-42A335.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.84
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.27
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.71
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.27
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I931.81
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G879.66
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F510.20
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C938.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A150.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A245.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A350.99
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A447.27
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A649.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A774.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A865.71
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A957.99
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D27.78
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.70
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.19
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.75
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I510.74
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.20e-2033
neuronal stem cell1.20e-2033
neuroblast1.20e-2033
electrically signaling cell1.20e-2033
CNS neuron (sensu Vertebrata)1.85e-1723
neuroblast (sensu Vertebrata)1.85e-1723
electrically responsive cell2.52e-1539
electrically active cell2.52e-1539
neural cell4.54e-1543
ectodermal cell2.08e-1444
neurectodermal cell2.08e-1444

Uber anatomy
Ontology termp-valuen
nervous system2.03e-3775
central nervous system5.84e-3673
ectoderm-derived structure8.38e-3495
ectoderm8.38e-3495
presumptive ectoderm8.38e-3495
neurectoderm1.31e-3364
neural plate1.31e-3364
presumptive neural plate1.31e-3364
regional part of nervous system2.60e-3154
neural tube2.94e-2952
neural rod2.94e-2952
future spinal cord2.94e-2952
neural keel2.94e-2952
ecto-epithelium5.75e-2873
pre-chordal neural plate3.04e-2549
brain5.20e-2547
future brain5.20e-2547
regional part of brain2.53e-2446
anterior neural tube4.35e-2340
gray matter3.12e-2234
regional part of forebrain3.35e-2239
forebrain3.35e-2239
future forebrain3.35e-2239
structure with developmental contribution from neural crest1.16e-2192
brain grey matter3.04e-1829
regional part of telencephalon3.04e-1829
telencephalon3.04e-1829
cerebral cortex2.09e-1221
cerebral hemisphere2.09e-1221
pallium2.09e-1221
regional part of cerebral cortex4.72e-1017
occipital lobe2.98e-0910
visual cortex2.98e-0910
neocortex2.98e-0910
basal ganglion3.99e-078
nuclear complex of neuraxis3.99e-078
aggregate regional part of brain3.99e-078
collection of basal ganglia3.99e-078
cerebral subcortex3.99e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:31607037..31607061,-&oldid=4289822"