FFCP PHASE1:Mm9::chr15:80003680..80003697,+: Difference between revisions
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{{FFCP|EntrezGene=17309|HGNC=|MCL_coexpression_id=1|UniProt=Q5RKT9|association_with_transcript=-453bp_to_ENSMUST00000044970,NM_010795,uc007wvf.1_5end|description=CAGE_peak_6_at_Mgat3_5end|id=chr15:80003680..80003697,+|ontology_enrichment_celltype=CL:0000540!2.36e-16!33;CL:0000047!2.36e-16!33;CL:0000031!2.36e-16!33;CL:0000404!2.36e-16!33;CL:0000393!1.72e-14!39;CL:0000211!1.72e-14!39;CL:0000117!1.83e-14!23;CL:0000337!1.83e-14!23;CL:0000221!1.24e-12!44;CL:0000133!1.24e-12!44;CL:0002319!1.62e-12!43;CL:0000055!8.29e-11!50;CL:0002321!7.48e-07!70;CL:0000220!7.48e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,5.77e-25,23;CL:0000337,5.77e-25,23;CL:0000540,3.78e-24,33;CL:0000047,3.78e-24,33;CL:0000031,3.78e-24,33;CL:0000404,3.78e-24,33;CL:0000393,3.61e-20,39;CL:0000211,3.61e-20,39;CL:0002319,1.87e-17,43;CL:0000221,7.77e-17,44;CL:0000133,7.77e-17,44;CL:0002321,1.02e-11,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.13e-25!73;UBERON:0005743!1.13e-25!73;UBERON:0000073!4.47e-25!75;UBERON:0001016!4.47e-25!75;UBERON:0002020!1.63e-19!34;UBERON:0001049!2.10e-19!52;UBERON:0005068!2.10e-19!52;UBERON:0006241!2.10e-19!52;UBERON:0007135!2.10e-19!52;UBERON:0004121!4.64e-19!102;UBERON:0000924!4.64e-19!102;UBERON:0006601!4.64e-19!102;UBERON:0002346!1.14e-18!71;UBERON:0003075!1.14e-18!71;UBERON:0007284!1.14e-18!71;UBERON:0000955!5.82e-18!50;UBERON:0006238!5.82e-18!50;UBERON:0002616!1.89e-17!49;UBERON:0000033!1.19e-16!63;UBERON:0002791!5.28e-16!29;UBERON:0003528!5.28e-16!29;UBERON:0001893!5.28e-16!29;UBERON:0003080!1.02e-14!40;UBERON:0002780!3.73e-14!39;UBERON:0001890!3.73e-14!39;UBERON:0006240!3.73e-14!39;UBERON:0003056!4.61e-14!49;UBERON:0000956!1.27e-11!21;UBERON:0001869!1.27e-11!21;UBERON:0000203!1.27e-11!21;UBERON:0000153!1.21e-09!94;UBERON:0002619!1.22e-09!17;UBERON:0007811!1.77e-09!86;UBERON:0002021!5.06e-08!10;UBERON:0000411!5.06e-08!10;UBERON:0001950!5.06e-08!10;UBERON:0000468!1.01e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.67e-38,73;UBERON:0001016,8.30e-37,75;UBERON:0000073,1.69e-33,54;UBERON:0002020,5.65e-33,34;UBERON:0001049,7.54e-31,52;UBERON:0005068,7.54e-31,52;UBERON:0006241,7.54e-31,52;UBERON:0007135,7.54e-31,52;UBERON:0004121,1.22e-27,95;UBERON:0000924,1.22e-27,95;UBERON:0006601,1.22e-27,95;UBERON:0003528,1.27e-26,29;UBERON:0002791,1.27e-26,29;UBERON:0001893,1.27e-26,29;UBERON:0002346,2.54e-26,64;UBERON:0003075,2.54e-26,64;UBERON:0007284,2.54e-26,64;UBERON:0000955,8.56e-25,47;UBERON:0006238,8.56e-25,47;UBERON:0002616,6.52e-24,46;UBERON:0003080,9.82e-22,40;UBERON:0010371,2.66e-21,73;UBERON:0002780,9.40e-21,39;UBERON:0001890,9.40e-21,39;UBERON:0006240,9.40e-21,39;UBERON:0000956,1.07e-18,21;UBERON:0001869,1.07e-18,21;UBERON:0000203,1.07e-18,21;UBERON:0003056,3.69e-18,49;UBERON:0002619,4.09e-15,17;UBERON:0010314,4.83e-14,92;UBERON:0002021,2.81e-13,10;UBERON:0000411,2.81e-13,10;UBERON:0001950,2.81e-13,10;UBERON:0011216,1.70e-11,194;UBERON:0003076,1.72e-09,12;UBERON:0003057,1.72e-09,12;UBERON:0000025,2.67e-09,114;UBERON:0002420,5.60e-09,8;UBERON:0007245,5.60e-09,8;UBERON:0010009,5.60e-09,8;UBERON:0010011,5.60e-09,8;UBERON:0000454,5.60e-09,8;UBERON:0004111,1.66e-08,122;UBERON:0002240,2.13e-08,6;UBERON:0005174,2.13e-08,6;UBERON:0001137,2.13e-08,6;UBERON:0001948,1.78e-07,5;UBERON:0002315,1.78e-07,5|phase1_expression=0.480446541314382,0,0.909998478779072,0.30246421130683,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.811015449756117,0.367093504323363,0,0.218025156380447,0.659058548203415,0.194429899074283,0.419959264876088,0,0,0,0,0.257259436035947,0.286533439938757,0,4.04632921719196,4.23192783417626,6.97214543856797,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0.299600110518405,1.15265491596466,1.76272340924412,5.8052553482627,4.20649922702764,8.85518051651791,9.27647871996777,2.44981598429908,4.2172007248024,6.43453150627015,15.4162233399144,6.76742891851495,8.44835932909339,4.61602007055678,5.12330804173494,5.2091337055676,7.53794097303729,4.50210088025344,6.1119299110724,10.0173719061047,9.681274294339,6.33758115806022,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.704217098883403,0,2.54805239706646,0,2.16491041011214,2.28023878927589,3.0331466700887,0.34255163915718,0,0.445326417194474,0.693941307064543,0.304465478312141,0.922461989024234,0.452167921657868,0.587943535678524,0,0.247194967734374,0,0,0,0,0,0,5.85561594023094,4.81727425670947,0.255457055208591,0,0,0,5.24267237916879,4.57500602818627,2.38743269014442,6.08385120672968,4.34716277461562,6.44142938134636,4.70499662896497,0.101839363850316,0.248813941220186,0.252722758433675,0.420883711772948,1.04096354370163,0.229902104433473,0.540186389416048,0.30140963567143,0.408218994907967,0.12811372028485,0.749613796477831,1.81092359517311,0.646703978798527,0.567318240503458,0.879755620819744,1.31517439456545,0.83414174767679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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17309 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q5RKT9 | |||
|association_with_transcript=-453bp_to_ENSMUST00000044970,NM_010795,uc007wvf.1_5end | |||
|cluster_id=chr15:80003680..80003697,+ | |||
|description=CAGE_peak_6_at_Mgat3_5end | |||
|id=chr15:80003680..80003697,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.36e-16!33;CL:0000047!2.36e-16!33;CL:0000031!2.36e-16!33;CL:0000404!2.36e-16!33;CL:0000393!1.72e-14!39;CL:0000211!1.72e-14!39;CL:0000117!1.83e-14!23;CL:0000337!1.83e-14!23;CL:0000221!1.24e-12!44;CL:0000133!1.24e-12!44;CL:0002319!1.62e-12!43;CL:0000055!8.29e-11!50;CL:0002321!7.48e-07!70;CL:0000220!7.48e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.77e-25,23;CL:0000337,5.77e-25,23;CL:0000540,3.78e-24,33;CL:0000047,3.78e-24,33;CL:0000031,3.78e-24,33;CL:0000404,3.78e-24,33;CL:0000393,3.61e-20,39;CL:0000211,3.61e-20,39;CL:0002319,1.87e-17,43;CL:0000221,7.77e-17,44;CL:0000133,7.77e-17,44;CL:0002321,1.02e-11,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.13e-25!73;UBERON:0005743!1.13e-25!73;UBERON:0000073!4.47e-25!75;UBERON:0001016!4.47e-25!75;UBERON:0002020!1.63e-19!34;UBERON:0001049!2.10e-19!52;UBERON:0005068!2.10e-19!52;UBERON:0006241!2.10e-19!52;UBERON:0007135!2.10e-19!52;UBERON:0004121!4.64e-19!102;UBERON:0000924!4.64e-19!102;UBERON:0006601!4.64e-19!102;UBERON:0002346!1.14e-18!71;UBERON:0003075!1.14e-18!71;UBERON:0007284!1.14e-18!71;UBERON:0000955!5.82e-18!50;UBERON:0006238!5.82e-18!50;UBERON:0002616!1.89e-17!49;UBERON:0000033!1.19e-16!63;UBERON:0002791!5.28e-16!29;UBERON:0003528!5.28e-16!29;UBERON:0001893!5.28e-16!29;UBERON:0003080!1.02e-14!40;UBERON:0002780!3.73e-14!39;UBERON:0001890!3.73e-14!39;UBERON:0006240!3.73e-14!39;UBERON:0003056!4.61e-14!49;UBERON:0000956!1.27e-11!21;UBERON:0001869!1.27e-11!21;UBERON:0000203!1.27e-11!21;UBERON:0000153!1.21e-09!94;UBERON:0002619!1.22e-09!17;UBERON:0007811!1.77e-09!86;UBERON:0002021!5.06e-08!10;UBERON:0000411!5.06e-08!10;UBERON:0001950!5.06e-08!10;UBERON:0000468!1.01e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.67e-38,73;UBERON:0001016,8.30e-37,75;UBERON:0000073,1.69e-33,54;UBERON:0002020,5.65e-33,34;UBERON:0001049,7.54e-31,52;UBERON:0005068,7.54e-31,52;UBERON:0006241,7.54e-31,52;UBERON:0007135,7.54e-31,52;UBERON:0004121,1.22e-27,95;UBERON:0000924,1.22e-27,95;UBERON:0006601,1.22e-27,95;UBERON:0003528,1.27e-26,29;UBERON:0002791,1.27e-26,29;UBERON:0001893,1.27e-26,29;UBERON:0002346,2.54e-26,64;UBERON:0003075,2.54e-26,64;UBERON:0007284,2.54e-26,64;UBERON:0000955,8.56e-25,47;UBERON:0006238,8.56e-25,47;UBERON:0002616,6.52e-24,46;UBERON:0003080,9.82e-22,40;UBERON:0010371,2.66e-21,73;UBERON:0002780,9.40e-21,39;UBERON:0001890,9.40e-21,39;UBERON:0006240,9.40e-21,39;UBERON:0000956,1.07e-18,21;UBERON:0001869,1.07e-18,21;UBERON:0000203,1.07e-18,21;UBERON:0003056,3.69e-18,49;UBERON:0002619,4.09e-15,17;UBERON:0010314,4.83e-14,92;UBERON:0002021,2.81e-13,10;UBERON:0000411,2.81e-13,10;UBERON:0001950,2.81e-13,10;UBERON:0011216,1.70e-11,194;UBERON:0003076,1.72e-09,12;UBERON:0003057,1.72e-09,12;UBERON:0000025,2.67e-09,114;UBERON:0002420,5.60e-09,8;UBERON:0007245,5.60e-09,8;UBERON:0010009,5.60e-09,8;UBERON:0010011,5.60e-09,8;UBERON:0000454,5.60e-09,8;UBERON:0004111,1.66e-08,122;UBERON:0002240,2.13e-08,6;UBERON:0005174,2.13e-08,6;UBERON:0001137,2.13e-08,6;UBERON:0001948,1.78e-07,5;UBERON:0002315,1.78e-07,5 | |||
|phase1_expression=0.480446541314382,0,0.909998478779072,0.30246421130683,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.811015449756117,0.367093504323363,0,0.218025156380447,0.659058548203415,0.194429899074283,0.419959264876088,0,0,0,0,0.257259436035947,0.286533439938757,0,4.04632921719196,4.23192783417626,6.97214543856797,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0.299600110518405,1.15265491596466,1.76272340924412,5.8052553482627,4.20649922702764,8.85518051651791,9.27647871996777,2.44981598429908,4.2172007248024,6.43453150627015,15.4162233399144,6.76742891851495,8.44835932909339,4.61602007055678,5.12330804173494,5.2091337055676,7.53794097303729,4.50210088025344,6.1119299110724,10.0173719061047,9.681274294339,6.33758115806022,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.704217098883403,0,2.54805239706646,0,2.16491041011214,2.28023878927589,3.0331466700887,0.34255163915718,0,0.445326417194474,0.693941307064543,0.304465478312141,0.922461989024234,0.452167921657868,0.587943535678524,0,0.247194967734374,0,0,0,0,0,0,5.85561594023094,4.81727425670947,0.255457055208591,0,0,0,5.24267237916879,4.57500602818627,2.38743269014442,6.08385120672968,4.34716277461562,6.44142938134636,4.70499662896497,0.101839363850316,0.248813941220186,0.252722758433675,0.420883711772948,1.04096354370163,0.229902104433473,0.540186389416048,0.30140963567143,0.408218994907967,0.12811372028485,0.749613796477831,1.81092359517311,0.646703978798527,0.567318240503458,0.879755620819744,1.31517439456545,0.834141747676794,0.696504333044333,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0,0.402619256281115,8.62188789112922,2.98423375899925,0.330418782983798,0.528901133327089,0.426576501070468,0.928946687441754,0.644337306610467,1.00841762311671,1.11189021922435,0.951128130562796,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.456994050438915,0,0.407302655690628,0.193952487167626,0.140271639780637,0.126473074248515,0.738050739898011,0.627994911365499,0.370191491765402,0,0.667380422864376,0.196558995113203,0,0.405720242777006,0.241177159752417,0.763877555344259,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,1.10851914099963,0.568474235311454,1.30371981153621,0.678980343100753,1.17345124144251,0.335012514883631,0.476087281772027,0.780534591431195,0.788175720530955,0.664394068946325,0.318909537314974,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,4.17431533968259,4.57125577709592,0,0.252470927204373,0.94652465824877,0.390438744296638,1.93881057959519,1.19484398976276,1.55959071857676,1.13230612315533,0.809621403349789,3.79932615284705,1.58115111178609,4.17717711348349,0,0.890328018336276,0.325773918707152,0.164970122972535,0,0.971122544619926,0.604647113929502,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.900305470156551,0.905510786479282,0.214337035031592,0.354680467284547,0.356737635204141,0,0,1.40803024838226,0.42366414172764,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0.582961673259701,5.00648315428376,0,0.619160603889667,0,0,0,0,0,0,0,0.954670618015114,0.949007980743406,1.21991680276109,0.432021363287205,1.88179466413022,1.9652630737156,0.944050424693745,0.41326727862668,0.523511883968059,0.777689839750757,0,0,0,0.66183396182839,0,0.904118764344118,0.506868376472335,0,0.39061315453185,0.314578033277133,0,0.288030006257865,0.316011120628178,0,0.205421914329655,0.51968329191118,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0.504130925684203,0.38983152295901,0.192423683280659,0.350630706544707,0.453460767230423,0,0,0,3.86379188064381,0.750729901804728,0,0,0,10.1655331671072,8.74617949363636,9.73922372846974,16.3260523226503,6.85082519770642,12.0863023582352,8.10027000278167,5.85417564191487,8.60970577069989,6.73088405277366,0.31136204275253,1.19707462020309,0.682934423016537,0.972426868273176,0.838452650511929,0,0.222246727801615,2.06035057238894,1.92551525755089,1.01078884705519,1.01391719956096,1.13175804831646,0.655490552289177,0.768301828858431,0.689225627467359,0.952587382566147,0.347652977834566,0.578727661391115,0.824171801606613,0.294397840268795,1.37147700954166,0.532427418478012,0.476872379894642,0.290692833264657,0.846984423737976,1.01537529470012,0.548783918618318,1.31534855718921,0.679020569229309,0.561142271657738,0.118635018124174,0.394017929502254,1.22769312950907,0.929621047115796,0.385813221962283,0.499621155875892,1.63752125911786,1.07435527024149,0.191288332068843,0.220591419119515,0 | |||
|short_description=p6@Mgat3 | |||
}} |
Latest revision as of 03:32, 27 September 2015
Short description: | p6@Mgat3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Mgat3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -453bp_to_ENSMUST00000044970, NM_010795, uc007wvf.1_5end |
EntrezGene: | Mgat3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.77e-25 | 23 |
neuroblast (sensu Vertebrata) | 5.77e-25 | 23 |
neuron | 3.78e-24 | 33 |
neuronal stem cell | 3.78e-24 | 33 |
neuroblast | 3.78e-24 | 33 |
electrically signaling cell | 3.78e-24 | 33 |
electrically responsive cell | 3.61e-20 | 39 |
electrically active cell | 3.61e-20 | 39 |
neural cell | 1.87e-17 | 43 |
ectodermal cell | 7.77e-17 | 44 |
neurectodermal cell | 7.77e-17 | 44 |
embryonic cell | 1.02e-11 | 70 |