Personal tools

FFCP PHASE1:Mm9::chr13:115892346..115892349,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr13:115892346..115892349,- |short_description=p3@Pelo,p6@Itga1 |description=CAGE_peak_3_at_Pelo_5end,CAGE_peak_6_at_Itga1_5end |association_with_transcript=-1...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:115892346..115892349,-
|DHSsupport=NA
|short_description=p3@Pelo,p6@Itga1
|DPIdataset=NA
|description=CAGE_peak_3_at_Pelo_5end,CAGE_peak_6_at_Itga1_5end
|association_with_transcript=-174bp_to_ENSMUST00000061673,NM_001033228,uc007rxx.1,uc007rxy.1,uc007rxz.1,uc007rya.1,uc007ryd.2_5end
|EntrezGene=109700,105083
|EntrezGene=109700,105083
|HGNC=
|HGNC=
|MCL_coexpression_id=2055
|TSSclassifier=NA
|UniProt=F8VQN5,Q3V3R4,Q8BPT3,Q3URV2
|UniProt=F8VQN5,Q3V3R4,Q8BPT3,Q3URV2
|association_with_transcript=-174bp_to_ENSMUST00000061673,NM_001033228,uc007rxx.1,uc007rxy.1,uc007rxz.1,uc007rya.1,uc007ryd.2_5end
|cluster_id=chr13:115892346..115892349,-
|description=CAGE_peak_3_at_Pelo_5end,CAGE_peak_6_at_Itga1_5end
|id=chr13:115892346..115892349,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000107,1.67e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004872!6.00e-11!33;UBERON:0004535!1.24e-08!23;UBERON:0001009!1.24e-08!23;UBERON:0007100!2.80e-08!18;UBERON:0000948!2.80e-08!18;UBERON:0005498!2.80e-08!18;UBERON:0004140!2.80e-08!18;UBERON:0009881!2.80e-08!18;UBERON:0004141!2.80e-08!18;UBERON:0003084!2.80e-08!18;UBERON:0007005!2.80e-08!18;UBERON:0004139!2.80e-08!18;UBERON:0004291!2.80e-08!18;UBERON:0005157!6.04e-08!27;UBERON:0009569!7.48e-08!66;UBERON:0005153!1.98e-07!17;UBERON:0003914!2.47e-07!47;UBERON:0002048!2.79e-07!14;UBERON:0000117!2.79e-07!14;UBERON:0000171!2.79e-07!14;UBERON:0000170!2.79e-07!14;UBERON:0005597!2.79e-07!14;UBERON:0000118!2.79e-07!14;UBERON:0000926!3.52e-07!193;UBERON:0004120!3.52e-07!193;UBERON:0006603!3.52e-07!193;UBERON:0003103!9.39e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.27e-12,33;UBERON:0005157,6.32e-11,20;UBERON:0007100,8.12e-10,18;UBERON:0000948,8.12e-10,18;UBERON:0005498,8.12e-10,18;UBERON:0004140,8.12e-10,18;UBERON:0009881,8.12e-10,18;UBERON:0004141,8.12e-10,18;UBERON:0003084,8.12e-10,18;UBERON:0007005,8.12e-10,18;UBERON:0004139,8.12e-10,18;UBERON:0004291,8.12e-10,18;UBERON:0004535,8.87e-10,23;UBERON:0001009,8.87e-10,23;UBERON:0002048,7.70e-09,14;UBERON:0000117,7.70e-09,14;UBERON:0000171,7.70e-09,14;UBERON:0000170,7.70e-09,14;UBERON:0005597,7.70e-09,14;UBERON:0000118,7.70e-09,14;UBERON:0005177,1.52e-08,79;UBERON:0005153,1.61e-08,17;UBERON:0002410,1.67e-08,9;UBERON:0003103,2.97e-08,43;UBERON:0009569,8.95e-08,66;UBERON:0003914,1.12e-07,47;UBERON:0002100,1.66e-07,90
|phase1_expression=0.640595388419176,0,0.454999239389536,0.30246421130683,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.755380907853464,1.01376931219515,0.183546752161682,0,0.65407546914134,0.878744730937887,2.3331587888914,0.139986421625363,0,0,0,0,1.02903774414379,1.14613375975503,1.54701627683233,0,0,0.633831403506179,0,1.77858959222228,0,0,0,0.299600110518405,0.768436610643109,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0,0.0914876436024097,0,0,0,0.45839474333043,0.883885756421003,0.427115042397309,0,0,0.831287161174641,17.971598299504,3.44169550792555,0,0,0.649776417447669,0,0.561777680527007,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,1.03575153458869,1.03909497345377,0.346970653532272,0.608930956624282,0.230615497256059,0.753613202763113,1.17588707135705,0.753999547978053,1.48316980640624,3.03658649531814,0.884610551949874,1.29413479957927,1.54589062922275,0,0,0,0,0.766371165625774,0.479260498023681,0.599902730993408,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,1.52759045775474,1.36847667671102,0.505445516867349,0.210441855886474,0.130120442962704,0.229902104433473,0.900310649026746,0.753524089178575,0.884474488967262,0.896796041993948,0.749613796477831,0.258703370739016,0,0.189106080167819,0.703804496655795,1.09597866213787,0.278047249225598,1.0447564995665,0.61734640922383,0.398068533636986,0,0.772043721344145,0.568326998791185,1.86413195281952,1.64168241986767,2.16074473753218,0.946978942340841,2.16440654922144,1.54267112887378,2.79040733700489,1.87791380979733,3.03589890154641,2.30383789878873,5.08919138645195,6.89084881139774,6.72519942156529,7.24515380460467,6.30770168173747,0,0.205809224758569,0,0,0.426576501070468,0.464473343720877,0.77320476793256,0.605050573870028,0.444756087689741,0.570676878337677,0,0.658795818896044,0.502670417600539,1.98956472041151,2.72949721966768,0,0.864552199498777,1.39398891278057,0.379335801906163,0.913988100877831,1.1270773567308,1.22190796707189,1.16371492300575,2.17421041659988,3.98390183882821,2.95220295959204,3.45397201251025,3.45512058981041,1.1858105083486,0.333690211432188,0.196558995113203,0,1.01430060694251,0.241177159752417,2.03700681425136,0.863088412352432,0.486405680325106,0.274561413188081,1.43768206527355,2.23284568601102,2.49630138491648,2.27320990152401,0.896987067609561,2.41221760681684,6.65111484599777,0.568474235311454,1.30371981153621,1.52770577197669,2.11221223459652,1.50755631697634,1.90434912708811,2.14647012643579,7.40885177299098,6.2010113101657,8.92946704481928,9.5040722535128,7.25276923836761,5.49666422609744,0,0,1.96705709207614,1.10374698521893,0,0.35163505977661,0,3.02965112645248,4.10160685241134,5.0757036758563,8.40151251157916,3.58453196928828,3.34198011123591,5.09537755419898,3.23848561339915,4.9683495844923,2.76701444562566,0,1.70328102249922,1.06839362200353,0.81443479676788,1.81467135269789,0,0.242780636154981,0.302323556964751,1.32023555829129,0,1.22974059177571,2.06742634534577,1.45413491791002,0.356497378384721,2.84433082142234,2.10837217149998,0,1.02131881726136,0.36012218806262,0.517434735131018,1.07168517515796,0.709360934569094,0.713475270408282,0.658196082408484,0.608929898229199,5.86679270159276,2.33015277950202,0.661585194164886,0.49465875882444,0.484393280087717,1.14594557363496,1.79058516004705,2.79039529566604,1.1659233465194,0,0.170870880797853,1.65109494370578,3.70389054739423,1.31857919903284,0.956859594047176,1.83022538565218,0.169978429993855,0,0.138199973804424,0.954670618015114,0.474503990371703,0.406638934253697,0.756037385752609,0.418176592028937,1.52853794622324,1.48350781023303,3.63675205191478,1.57053565190418,2.07383957266869,0.621339313086926,0,0.747582730219894,0.496375471371293,0.194451188344048,0.774958940866387,0.844780627453891,1.05621514781179,0.651021924219751,0.943734099831398,0.241584120826006,1.15212002503146,0.948033361884535,0.202725215290164,0.308132871494482,0,0,0.198681354781265,0.240390899039938,0.295379054349154,0.807731599585181,0.0762068066549998,0.201652370273681,0.0974578807397524,0.577271049841977,0.350630706544707,1.36038230169127,0,0.448569283047378,0.167884616364078,3.86379188064381,3.37828455812128,1.46521299413812,0.643105137237198,1.00314420807073,1.12950368523413,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.682934423016537,0.729320151204882,0.209613162627982,0.735374033800057,1.55572709461131,0.618105171716683,0.320919209591815,0.505394423527595,1.52087579934144,1.88626341386076,1.03005658216871,1.21647789569252,0.861532034334199,0,0.579421629724277,2.12200142510076,2.06042950401653,1.17759136107518,0.685738504770831,1.4198064492747,0.238436189947321,1.30811774969096,1.31753132581463,1.94613598150856,1.09756783723664,0,0.814824683075171,1.12228454331548,1.54225523561426,1.37906275325789,0.818462086339379,1.39443157067369,0.964533054905707,0.249810577937946,1.16965804222704,1.07435527024149,1.72159498861959,2.42650561031467,1.85494268496337
|phase1_expression=0.640595388419176,0,0.454999239389536,0.30246421130683,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.755380907853464,1.01376931219515,0.183546752161682,0,0.65407546914134,0.878744730937887,2.3331587888914,0.139986421625363,0,0,0,0,1.02903774414379,1.14613375975503,1.54701627683233,0,0,0.633831403506179,0,1.77858959222228,0,0,0,0.299600110518405,0.768436610643109,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0,0.0914876436024097,0,0,0,0.45839474333043,0.883885756421003,0.427115042397309,0,0,0.831287161174641,17.971598299504,3.44169550792555,0,0,0.649776417447669,0,0.561777680527007,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,1.03575153458869,1.03909497345377,0.346970653532272,0.608930956624282,0.230615497256059,0.753613202763113,1.17588707135705,0.753999547978053,1.48316980640624,3.03658649531814,0.884610551949874,1.29413479957927,1.54589062922275,0,0,0,0,0.766371165625774,0.479260498023681,0.599902730993408,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,1.52759045775474,1.36847667671102,0.505445516867349,0.210441855886474,0.130120442962704,0.229902104433473,0.900310649026746,0.753524089178575,0.884474488967262,0.896796041993948,0.749613796477831,0.258703370739016,0,0.189106080167819,0.703804496655795,1.09597866213787,0.278047249225598,1.0447564995665,0.61734640922383,0.398068533636986,0,0.772043721344145,0.568326998791185,1.86413195281952,1.64168241986767,2.16074473753218,0.946978942340841,2.16440654922144,1.54267112887378,2.79040733700489,1.87791380979733,3.03589890154641,2.30383789878873,5.08919138645195,6.89084881139774,6.72519942156529,7.24515380460467,6.30770168173747,0,0.205809224758569,0,0,0.426576501070468,0.464473343720877,0.77320476793256,0.605050573870028,0.444756087689741,0.570676878337677,0,0.658795818896044,0.502670417600539,1.98956472041151,2.72949721966768,0,0.864552199498777,1.39398891278057,0.379335801906163,0.913988100877831,1.1270773567308,1.22190796707189,1.16371492300575,2.17421041659988,3.98390183882821,2.95220295959204,3.45397201251025,3.45512058981041,1.1858105083486,0.333690211432188,0.196558995113203,0,1.01430060694251,0.241177159752417,2.03700681425136,0.863088412352432,0.486405680325106,0.274561413188081,1.43768206527355,2.23284568601102,2.49630138491648,2.27320990152401,0.896987067609561,2.41221760681684,6.65111484599777,0.568474235311454,1.30371981153621,1.52770577197669,2.11221223459652,1.50755631697634,1.90434912708811,2.14647012643579,7.40885177299098,6.2010113101657,8.92946704481928,9.5040722535128,7.25276923836761,5.49666422609744,0,0,1.96705709207614,1.10374698521893,0,0.35163505977661,0,3.02965112645248,4.10160685241134,5.0757036758563,8.40151251157916,3.58453196928828,3.34198011123591,5.09537755419898,3.23848561339915,4.9683495844923,2.76701444562566,0,1.70328102249922,1.06839362200353,0.81443479676788,1.81467135269789,0,0.242780636154981,0.302323556964751,1.32023555829129,0,1.22974059177571,2.06742634534577,1.45413491791002,0.356497378384721,2.84433082142234,2.10837217149998,0,1.02131881726136,0.36012218806262,0.517434735131018,1.07168517515796,0.709360934569094,0.713475270408282,0.658196082408484,0.608929898229199,5.86679270159276,2.33015277950202,0.661585194164886,0.49465875882444,0.484393280087717,1.14594557363496,1.79058516004705,2.79039529566604,1.1659233465194,0,0.170870880797853,1.65109494370578,3.70389054739423,1.31857919903284,0.956859594047176,1.83022538565218,0.169978429993855,0,0.138199973804424,0.954670618015114,0.474503990371703,0.406638934253697,0.756037385752609,0.418176592028937,1.52853794622324,1.48350781023303,3.63675205191478,1.57053565190418,2.07383957266869,0.621339313086926,0,0.747582730219894,0.496375471371293,0.194451188344048,0.774958940866387,0.844780627453891,1.05621514781179,0.651021924219751,0.943734099831398,0.241584120826006,1.15212002503146,0.948033361884535,0.202725215290164,0.308132871494482,0,0,0.198681354781265,0.240390899039938,0.295379054349154,0.807731599585181,0.0762068066549998,0.201652370273681,0.0974578807397524,0.577271049841977,0.350630706544707,1.36038230169127,0,0.448569283047378,0.167884616364078,3.86379188064381,3.37828455812128,1.46521299413812,0.643105137237198,1.00314420807073,1.12950368523413,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.682934423016537,0.729320151204882,0.209613162627982,0.735374033800057,1.55572709461131,0.618105171716683,0.320919209591815,0.505394423527595,1.52087579934144,1.88626341386076,1.03005658216871,1.21647789569252,0.861532034334199,0,0.579421629724277,2.12200142510076,2.06042950401653,1.17759136107518,0.685738504770831,1.4198064492747,0.238436189947321,1.30811774969096,1.31753132581463,1.94613598150856,1.09756783723664,0,0.814824683075171,1.12228454331548,1.54225523561426,1.37906275325789,0.818462086339379,1.39443157067369,0.964533054905707,0.249810577937946,1.16965804222704,1.07435527024149,1.72159498861959,2.42650561031467,1.85494268496337
|short_description=p3@Pelo,p6@Itga1
}}
}}

Latest revision as of 03:39, 27 September 2015

Short description:p3@Pelo, p6@Itga1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pelo_5end, CAGE_peak_6_at_Itga1_5end
Coexpression cluster:MCL_coexpression_mm9:2055
Association with transcript: -174bp_to_ENSMUST00000061673, NM_001033228, uc007rxx.1, uc007rxy.1, uc007rxz.1, uc007rya.1, uc007ryd.2_5end
EntrezGene:109700,105083
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pelop6@Itga1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G16.89
heart, neonate N20.CNhs11127.821-26I66.73
heart, neonate N25.CNhs11196.1351-25D37.25
heart, neonate N30.CNhs11202.1390-42D26.31
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D53.98
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B16.65
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E57.41
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E68.93
lung, neonate N20.CNhs11109.822-18A49.50
lung, neonate N25.CNhs11119.1359-25C77.25
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.40
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A93.64
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron1.67e-089

Uber anatomy
Ontology termp-valuen
splanchnic layer of lateral plate mesoderm3.27e-1233
epithelial fold6.32e-1120
primary circulatory organ8.12e-1018
heart8.12e-1018
primitive heart tube8.12e-1018
primary heart field8.12e-1018
anterior lateral plate mesoderm8.12e-1018
heart tube8.12e-1018
heart primordium8.12e-1018
cardiac mesoderm8.12e-1018
cardiogenic plate8.12e-1018
heart rudiment8.12e-1018
cardiovascular system8.87e-1023
circulatory system8.87e-1023
lung7.70e-0914
respiratory tube7.70e-0914
respiration organ7.70e-0914
pair of lungs7.70e-0914
lung primordium7.70e-0914
lung bud7.70e-0914
trunk region element1.52e-0879
epithelial bud1.61e-0817
autonomic nervous system1.67e-089
compound organ2.97e-0843
subdivision of trunk8.95e-0866
epithelial tube1.12e-0747
trunk1.66e-0790
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:115892346..115892349,-&oldid=4290761"