FFCP PHASE1:Mm9::chr18:35278596..35278607,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12385 | |EntrezGene=12385 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3134 | |||
|TSSclassifier=NA | |||
|UniProt=P26231,Q545R0 | |UniProt=P26231,Q545R0 | ||
|association_with_transcript=30bp_to_NM_009818,uc008ely.1_5end | |association_with_transcript=30bp_to_NM_009818,uc008ely.1_5end | ||
|cluster_id=chr18:35278596..35278607,+ | |||
|description=CAGE_peak_3_at_Ctnna1_5end | |description=CAGE_peak_3_at_Ctnna1_5end | ||
|id=chr18:35278596..35278607,+ | |id=chr18:35278596..35278607,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!5.22e-09!23;UBERON:0001009!5.22e-09!23;UBERON:0000160!1.62e-08!43;UBERON:0005409!4.04e-08!59;UBERON:0000344!4.58e-08!15;UBERON:0007100!5.07e-08!18;UBERON:0000948!5.07e-08!18;UBERON:0005498!5.07e-08!18;UBERON:0004140!5.07e-08!18;UBERON:0009881!5.07e-08!18;UBERON:0004141!5.07e-08!18;UBERON:0003084!5.07e-08!18;UBERON:0007005!5.07e-08!18;UBERON:0004139!5.07e-08!18;UBERON:0004291!5.07e-08!18;UBERON:0005178!2.32e-07!17;UBERON:0005181!2.32e-07!17;UBERON:0002224!2.32e-07!17;UBERON:0000915!2.32e-07!17;UBERON:0008947!2.32e-07!17;UBERON:0003258!2.32e-07!17;UBERON:0003103!4.00e-07!43;UBERON:0001242!6.32e-07!13;UBERON:0000060!6.32e-07!13;UBERON:0001262!6.32e-07!13;UBERON:0004786!6.32e-07!13;UBERON:0004119!7.85e-07!130;UBERON:0000925!7.85e-07!130;UBERON:0006595!7.85e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.56e-13,31;UBERON:0005409,2.26e-11,47;UBERON:0004535,4.19e-09,23;UBERON:0001009,4.19e-09,23;UBERON:0000344,3.77e-08,15;UBERON:0007100,4.18e-08,18;UBERON:0000948,4.18e-08,18;UBERON:0005498,4.18e-08,18;UBERON:0004140,4.18e-08,18;UBERON:0009881,4.18e-08,18;UBERON:0004141,4.18e-08,18;UBERON:0003084,4.18e-08,18;UBERON:0007005,4.18e-08,18;UBERON:0004139,4.18e-08,18;UBERON:0004291,4.18e-08,18;UBERON:0004119,5.87e-08,118;UBERON:0000925,5.87e-08,118;UBERON:0006595,5.87e-08,118;UBERON:0005178,1.95e-07,17;UBERON:0005181,1.95e-07,17;UBERON:0002224,1.95e-07,17;UBERON:0000915,1.95e-07,17;UBERON:0008947,1.95e-07,17;UBERON:0003258,1.95e-07,17;UBERON:0001007,3.04e-07,116;UBERON:0001555,3.04e-07,116;UBERON:0007026,3.04e-07,116;UBERON:0001242,5.39e-07,13;UBERON:0001262,5.39e-07,13;UBERON:0004786,5.39e-07,13;UBERON:0003103,6.83e-07,43 | |||
|phase1_expression=3.36312578920067,32.1057375028212,43.2249277420059,30.8513495532967,33.5600139064053,12.0873075776561,17.9881733258555,0,1.267098499365,0.936258105287974,0.513653904676515,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,3.656861476496,0.198581902401771,0.261199789138935,29.5985982167802,22.4821095445827,23.5435105287158,23.26114779259,23.4863643627619,36.104449696711,18.6502296022349,13.9690221712842,0,1.23012957516914,0,5.19932915552294,5.81821258754723,4.90006455029686,1.25559489221072,0,0,0,0,0,4.53228544712078,4.96746962975621,6.9747765821439,0.782391344348039,0.872100625521786,1.97717564461025,3.11087838518853,1.67983705950435,2.87505128729943,0.503347818173209,0,0,5.65970759279083,3.72493471920384,12.8918023069361,0.606949382578793,1.5869729378161,0.633831403506179,1.69422266034566,0,0.449949858640699,0,0,0,0.384218305321555,1.45165457231869,1.35005938331691,0.841299845405528,0.285650984403804,0.662605622854841,1.22490799214954,1.15014565221884,1.83843757322004,0,0.893811366596314,0.768032666281217,0.659431438650969,1.28082701043374,0,1.3959149950069,0,1.22238598221448,0.883885756421003,0.427115042397309,0.186399445825301,6.96680978665293,7.55715601067855,30.4357713136762,9.46466264679525,11.5595126730318,0,3.89865850468601,5.37632264516803,5.05599912474307,4.94247935476367,1.81850203222008,2.82671659608272,4.3661460130771,1.28326477414318,0,0,14.2884087067401,14.4415123320806,17.6933555755174,8.22123933977232,2.58937883647172,4.45326417194474,3.29622120855658,2.74018930480927,3.92046345335299,3.01445281105245,4.58595957829249,2.51333182659351,22.0003521283593,10.5557530551536,0.884610551949874,1.94120219936891,1.54589062922275,2.90925151881133,29.8226817948995,0.585561594023094,0.83778682725382,26.0566196312763,0.359445373517761,1.79970819298022,0.508280908292259,1.3481157546434,1.37250180845588,0.125654352112864,0.695297280769106,0.767146371990992,1.24672826735736,1.46017136760982,3.1570202793598,2.36373244159177,1.26361379216837,6.94458124425364,4.16385417480652,3.67843367093557,2.88099407688559,2.41127708537144,2.24520447199382,3.33095672740609,1.68663104207512,2.84573707812917,10.5628316537093,7.94245536704841,5.45448484908241,6.1374805079721,3.61461423993277,3.83077383174383,4.11564272815887,6.36909653819178,0.702213187313235,0.51469581422943,0.568326998791185,9.73491130916859,5.8631514995274,6.66229627405755,8.99629995223799,10.0349758191176,12.1871019181029,14.1845706297749,13.413670069981,26.5057327173475,21.228220638839,32.833492815819,37.3727212006395,31.8715972587224,30.517466025456,29.7938249648025,0,0.92614151141356,79.3005079161115,24.0650015663825,4.90562976231038,3.71578674976702,6.70110798874885,8.0673409849337,8.67274370994994,6.84812254005213,23.2519240156811,10.0466362381647,11.8127548136127,11.5394753783867,18.5215882763164,16.178749355776,20.1008386383466,19.7149860521824,5.12103332573321,6.96915926919346,14.6520056375005,8.14605311381257,5.43066964069352,8.41629838683823,7.8413306034079,10.9231509504906,8.47793130343424,9.87177311374404,3.26097889795864,1.16791574001266,1.17935397067922,0.674586337154561,0.811440485554012,1.68824011826692,1.2731292589071,5.4662266115654,4.05338066937588,3.0201755450689,4.31304619582064,4.09355042435354,2.80833905803104,3.03094653536534,4.4849353380478,2.41221760681684,22.3551360101592,5.49525094134406,8.96307370431142,6.78980343100753,7.51008794523207,8.04030035720716,12.3782693260727,17.3668946593441,13.0837169608139,10.85176979279,13.0752910299139,18.3526912481627,14.850908440467,20.1062191428301,0,0,4.42587845717133,3.31124095565679,0.80275294993896,1.28932855251423,1.96721934452011,2.7771801992481,2.83957397474631,3.12350995437311,4.52389135238878,5.25731355495614,6.01556420022464,7.07691326972081,2.83367491172426,2.92255857911312,4.34816555741176,0.642642632843614,5.25178315270594,5.1639025063504,2.93196526836437,4.12425307431339,1.32745138339963,4.85561272309963,2.41858845571801,1.69744571780308,2.06711325016541,4.91896236710284,6.97756391554197,2.90826983582004,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,4.08527526904546,4.86164953884538,3.62204314591713,5.14408884075822,7.09360934569094,4.99432689285798,3.29098041204242,6.08929898229199,22.9978273902436,21.6068712281097,25.8018225724305,12.8611277294354,4.68246837418126,6.33285711745637,14.5634259683826,26.754966658445,18.9462543809403,0.927126510052548,0.341741761595705,2.68302928352189,2.59272338317596,2.0720530270516,0.546776910884101,0.228778173206523,2.03974115992626,1.53946597556024,1.65839968565309,22.9120948323627,5.69404788446044,5.69294507955176,5.72428306355547,3.97267762427491,8.07941485860857,5.39457385539283,5.2898211664215,19.3699397068182,10.7580427832188,6.21339313086926,0,6.13017838780313,1.98550188548517,1.36115831840833,2.0665571756437,1.35164900392623,1.76035857968631,1.43224823328345,3.56521771047417,1.44950472495604,0.864090018773596,0.316011120628178,3.24360344464263,2.2596410576262,1.42912905275575,1.43221356533985,0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|phase1_expression=3.36312578920067,32.1057375028212,43.2249277420059,30.8513495532967,33.5600139064053,12.0873075776561,17.9881733258555,0,1.267098499365,0.936258105287974,0.513653904676515,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,3.656861476496,0.198581902401771,0.261199789138935,29.5985982167802,22.4821095445827,23.5435105287158,23.26114779259,23.4863643627619,36.104449696711,18.6502296022349,13.9690221712842,0,1.23012957516914,0,5.19932915552294,5.81821258754723,4.90006455029686,1.25559489221072,0,0,0,0,0,4.53228544712078,4.96746962975621,6.9747765821439,0.782391344348039,0.872100625521786,1.97717564461025,3.11087838518853,1.67983705950435,2.87505128729943,0.503347818173209,0,0,5.65970759279083,3.72493471920384,12.8918023069361,0.606949382578793,1.5869729378161,0.633831403506179,1.69422266034566,0,0.449949858640699,0,0,0,0.384218305321555,1.45165457231869,1.35005938331691,0.841299845405528,0.285650984403804,0.662605622854841,1.22490799214954,1.15014565221884,1.83843757322004,0,0.893811366596314,0.768032666281217,0.659431438650969,1.28082701043374,0,1.3959149950069,0,1.22238598221448,0.883885756421003,0.427115042397309,0.186399445825301,6.96680978665293,7.55715601067855,30.4357713136762,9.46466264679525,11.5595126730318,0,3.89865850468601,5.37632264516803,5.05599912474307,4.94247935476367,1.81850203222008,2.82671659608272,4.3661460130771,1.28326477414318,0,0,14.2884087067401,14.4415123320806,17.6933555755174,8.22123933977232,2.58937883647172,4.45326417194474,3.29622120855658,2.74018930480927,3.92046345335299,3.01445281105245,4.58595957829249,2.51333182659351,22.0003521283593,10.5557530551536,0.884610551949874,1.94120219936891,1.54589062922275,2.90925151881133,29.8226817948995,0.585561594023094,0.83778682725382,26.0566196312763,0.359445373517761,1.79970819298022,0.508280908292259,1.3481157546434,1.37250180845588,0.125654352112864,0.695297280769106,0.767146371990992,1.24672826735736,1.46017136760982,3.1570202793598,2.36373244159177,1.26361379216837,6.94458124425364,4.16385417480652,3.67843367093557,2.88099407688559,2.41127708537144,2.24520447199382,3.33095672740609,1.68663104207512,2.84573707812917,10.5628316537093,7.94245536704841,5.45448484908241,6.1374805079721,3.61461423993277,3.83077383174383,4.11564272815887,6.36909653819178,0.702213187313235,0.51469581422943,0.568326998791185,9.73491130916859,5.8631514995274,6.66229627405755,8.99629995223799,10.0349758191176,12.1871019181029,14.1845706297749,13.413670069981,26.5057327173475,21.228220638839,32.833492815819,37.3727212006395,31.8715972587224,30.517466025456,29.7938249648025,0,0.92614151141356,79.3005079161115,24.0650015663825,4.90562976231038,3.71578674976702,6.70110798874885,8.0673409849337,8.67274370994994,6.84812254005213,23.2519240156811,10.0466362381647,11.8127548136127,11.5394753783867,18.5215882763164,16.178749355776,20.1008386383466,19.7149860521824,5.12103332573321,6.96915926919346,14.6520056375005,8.14605311381257,5.43066964069352,8.41629838683823,7.8413306034079,10.9231509504906,8.47793130343424,9.87177311374404,3.26097889795864,1.16791574001266,1.17935397067922,0.674586337154561,0.811440485554012,1.68824011826692,1.2731292589071,5.4662266115654,4.05338066937588,3.0201755450689,4.31304619582064,4.09355042435354,2.80833905803104,3.03094653536534,4.4849353380478,2.41221760681684,22.3551360101592,5.49525094134406,8.96307370431142,6.78980343100753,7.51008794523207,8.04030035720716,12.3782693260727,17.3668946593441,13.0837169608139,10.85176979279,13.0752910299139,18.3526912481627,14.850908440467,20.1062191428301,0,0,4.42587845717133,3.31124095565679,0.80275294993896,1.28932855251423,1.96721934452011,2.7771801992481,2.83957397474631,3.12350995437311,4.52389135238878,5.25731355495614,6.01556420022464,7.07691326972081,2.83367491172426,2.92255857911312,4.34816555741176,0.642642632843614,5.25178315270594,5.1639025063504,2.93196526836437,4.12425307431339,1.32745138339963,4.85561272309963,2.41858845571801,1.69744571780308,2.06711325016541,4.91896236710284,6.97756391554197,2.90826983582004,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,4.08527526904546,4.86164953884538,3.62204314591713,5.14408884075822,7.09360934569094,4.99432689285798,3.29098041204242,6.08929898229199,22.9978273902436,21.6068712281097,25.8018225724305,12.8611277294354,4.68246837418126,6.33285711745637,14.5634259683826,26.754966658445,18.9462543809403,0.927126510052548,0.341741761595705,2.68302928352189,2.59272338317596,2.0720530270516,0.546776910884101,0.228778173206523,2.03974115992626,1.53946597556024,1.65839968565309,22.9120948323627,5.69404788446044,5.69294507955176,5.72428306355547,3.97267762427491,8.07941485860857,5.39457385539283,5.2898211664215,19.3699397068182,10.7580427832188,6.21339313086926,0,6.13017838780313,1.98550188548517,1.36115831840833,2.0665571756437,1.35164900392623,1.76035857968631,1.43224823328345,3.56521771047417,1.44950472495604,0.864090018773596,0.316011120628178,3.24360344464263,2.2596410576262,1.42912905275575,1.43221356533985,0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| ||
|short_description=p3@Ctnna1 | |short_description=p3@Ctnna1 | ||
}} | }} |
Latest revision as of 04:37, 27 September 2015
Short description: | p3@Ctnna1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ctnna1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3134 |
Association with transcript: | 30bp_to_NM_009818, uc008ely.1_5end |
EntrezGene: | Ctnna1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.56e-13 | 31 |
gastrointestinal system | 2.26e-11 | 47 |
cardiovascular system | 4.19e-09 | 23 |
circulatory system | 4.19e-09 | 23 |
mucosa | 3.77e-08 | 15 |
primary circulatory organ | 4.18e-08 | 18 |
heart | 4.18e-08 | 18 |
primitive heart tube | 4.18e-08 | 18 |
primary heart field | 4.18e-08 | 18 |
anterior lateral plate mesoderm | 4.18e-08 | 18 |
heart tube | 4.18e-08 | 18 |
heart primordium | 4.18e-08 | 18 |
cardiac mesoderm | 4.18e-08 | 18 |
cardiogenic plate | 4.18e-08 | 18 |
heart rudiment | 4.18e-08 | 18 |
endoderm-derived structure | 5.87e-08 | 118 |
endoderm | 5.87e-08 | 118 |
presumptive endoderm | 5.87e-08 | 118 |
thoracic cavity element | 1.95e-07 | 17 |
thoracic segment organ | 1.95e-07 | 17 |
thoracic cavity | 1.95e-07 | 17 |
thoracic segment of trunk | 1.95e-07 | 17 |
respiratory primordium | 1.95e-07 | 17 |
endoderm of foregut | 1.95e-07 | 17 |
digestive system | 3.04e-07 | 116 |
digestive tract | 3.04e-07 | 116 |
primitive gut | 3.04e-07 | 116 |
intestinal mucosa | 5.39e-07 | 13 |
wall of intestine | 5.39e-07 | 13 |
gastrointestinal system mucosa | 5.39e-07 | 13 |
compound organ | 6.83e-07 | 43 |