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FFCP PHASE1:Mm9::chr13:14615363..14615432,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr13:14615363..14615432,-
|DHSsupport=NA
|short_description=p1@Hecw1
|DPIdataset=NA
|description=CAGE_peak_1_at_Hecw1_5end
|association_with_transcript=60bp_to_ENSMUST00000110516,NM_001081348,uc007pnd.2,uc007png.2,uc007pnh.2,uc007pni.2,uc011ywk.1_5end
|EntrezGene=94253
|EntrezGene=94253
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q8K4P8
|UniProt=Q8K4P8
|association_with_transcript=60bp_to_ENSMUST00000110516,NM_001081348,uc007pnd.2,uc007png.2,uc007pnh.2,uc007pni.2,uc011ywk.1_5end
|cluster_id=chr13:14615363..14615432,-
|description=CAGE_peak_1_at_Hecw1_5end
|id=chr13:14615363..14615432,-
|ontology_enrichment_celltype=CL:0000393!1.57e-16!39;CL:0000211!1.57e-16!39;CL:0000540!7.01e-16!33;CL:0000047!7.01e-16!33;CL:0000031!7.01e-16!33;CL:0000404!7.01e-16!33;CL:0000117!8.12e-15!23;CL:0000337!8.12e-15!23;CL:0000055!4.99e-12!50;CL:0000221!7.71e-12!44;CL:0000133!7.71e-12!44;CL:0002319!1.02e-11!43
|ontology_enrichment_celltype_v019_2=CL:0000540,5.98e-20,33;CL:0000047,5.98e-20,33;CL:0000031,5.98e-20,33;CL:0000404,5.98e-20,33;CL:0000393,3.50e-19,39;CL:0000211,3.50e-19,39;CL:0000117,1.39e-18,23;CL:0000337,1.39e-18,23;CL:0000221,2.34e-13,44;CL:0000133,2.34e-13,44;CL:0002319,3.41e-13,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.98e-27!75;UBERON:0001016!2.98e-27!75;UBERON:0001017!3.78e-27!73;UBERON:0005743!3.78e-27!73;UBERON:0002346!3.44e-26!71;UBERON:0003075!3.44e-26!71;UBERON:0007284!3.44e-26!71;UBERON:0000033!2.09e-24!63;UBERON:0004121!3.27e-24!102;UBERON:0000924!3.27e-24!102;UBERON:0006601!3.27e-24!102;UBERON:0001049!1.01e-23!52;UBERON:0005068!1.01e-23!52;UBERON:0006241!1.01e-23!52;UBERON:0007135!1.01e-23!52;UBERON:0000955!2.70e-22!50;UBERON:0006238!2.70e-22!50;UBERON:0002616!8.93e-22!49;UBERON:0003056!9.56e-21!49;UBERON:0002020!2.69e-20!34;UBERON:0003080!6.27e-18!40;UBERON:0002780!2.45e-17!39;UBERON:0001890!2.45e-17!39;UBERON:0006240!2.45e-17!39;UBERON:0002791!3.61e-17!29;UBERON:0003528!3.61e-17!29;UBERON:0001893!3.61e-17!29;UBERON:0000956!1.64e-12!21;UBERON:0001869!1.64e-12!21;UBERON:0000203!1.64e-12!21;UBERON:0007811!1.72e-12!86;UBERON:0000153!1.92e-11!94;UBERON:0002619!6.59e-10!17;UBERON:0002021!9.12e-09!10;UBERON:0000411!9.12e-09!10;UBERON:0001950!9.12e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.83e-32,73;UBERON:0002346,6.65e-32,64;UBERON:0003075,6.65e-32,64;UBERON:0007284,6.65e-32,64;UBERON:0001016,1.27e-31,75;UBERON:0004121,1.54e-29,95;UBERON:0000924,1.54e-29,95;UBERON:0006601,1.54e-29,95;UBERON:0000073,1.19e-28,54;UBERON:0001049,5.67e-27,52;UBERON:0005068,5.67e-27,52;UBERON:0006241,5.67e-27,52;UBERON:0007135,5.67e-27,52;UBERON:0010371,5.73e-27,73;UBERON:0002020,3.16e-25,34;UBERON:0003056,1.21e-24,49;UBERON:0000955,8.97e-23,47;UBERON:0006238,8.97e-23,47;UBERON:0002616,3.91e-22,46;UBERON:0003528,3.28e-21,29;UBERON:0002791,3.28e-21,29;UBERON:0001893,3.28e-21,29;UBERON:0003080,5.20e-21,40;UBERON:0002780,2.92e-20,39;UBERON:0001890,2.92e-20,39;UBERON:0006240,2.92e-20,39;UBERON:0010314,3.17e-20,92;UBERON:0000956,3.10e-15,21;UBERON:0001869,3.10e-15,21;UBERON:0000203,3.10e-15,21;UBERON:0002619,6.63e-12,17;UBERON:0002021,8.18e-11,10;UBERON:0000411,8.18e-11,10;UBERON:0001950,8.18e-11,10;UBERON:0002420,3.91e-07,8;UBERON:0007245,3.91e-07,8;UBERON:0010009,3.91e-07,8;UBERON:0010011,3.91e-07,8;UBERON:0000454,3.91e-07,8
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,6.29320347117916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,5.17022349219524,2.75320128242522,0.782391344348039,0.218025156380447,0,0.388859798148567,0.139986421625363,0,0,0,0,2.57259436035947,0.85960031981627,0.515672092277442,26.7057728334669,31.739458756322,20.9164363157039,0.677689064138264,1.77858959222228,0,0,0,0,0,39.6094319018385,34.021496459586,28.604194743788,12.2829923293636,16.3442720304194,30.5002090045236,19.3607851456837,19.3035945188104,33.0347642998166,19.5361627270337,21.3513081226178,30.2019598902144,28.5441448039518,32.8175423450759,16.4717969410815,16.8828783009504,14.8214300343506,37.4178303551558,30.6099113718071,39.5166825149637,0.454357159999104,1.81371744256285,0.289864488701678,0,0,0.539703191637817,0,0,0.561777680527007,1.36344258062446,0,0.70667914902068,1.54927761754349,0,0,0,0,0,0,0.79928715803342,0,0,1.04091196059682,1.52232739156071,0.691846491768175,1.50722640552623,1.88141931417128,0,0,0,0,0,0,0,0,19.3235326027621,14.6612694769419,0,0,0,0,19.9221550408414,19.2150253183823,35.4345272958278,32.678972196148,33.4987249102733,15.1685272528479,17.5220564113178,0.101839363850316,0,0,5.26104639716185,1.69156575851515,4.36813998423599,7.74267158163002,7.38453607395004,7.55205140579739,5.50888997224854,5.71580519814346,13.4525752784288,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.946978942340841,0.196764231747404,0.617068451549513,0.930135779001631,0,0.467061369468678,0.329119699826961,0.492502392237286,0,0.292399974850665,0.219550115291051,0,18.7158054222073,33.4439990232674,0,0,1.70630600428187,1.85789337488351,0.644337306610467,1.81515172161008,0.22237804384487,0.760902504450237,0,0.658795818896044,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,21.9954308283275,16.9956945558695,0,0,3.47059041357882,5.46614242015294,2.36965737506079,1.19484398976276,1.11399337041197,2.54768877709949,2.02405350837447,4.9683495844923,5.13874111330481,11.5675673911851,0.283880170416537,0.35613120733451,0.325773918707152,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.900305470156551,0,1.71469628025274,2.30542303734956,1.60531935841864,3.45552943264454,2.13125464380219,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0,0.582961673259701,22.4364615432717,0,1.65109494370578,0.555583582109135,0,0,0,0,0,0,0,0.949007980743406,1.42323626988794,1.29606408986162,0.418176592028937,0.436725127492355,0.674321731924103,0.826534557253359,0.26175594198403,0,0,0,0,0.165458490457098,0.388902376688095,0.258319646955462,0.675824501963113,0.58678619322877,0.13020438484395,0.314578033277133,0,0,0,1.01362607645082,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.772758376128762,0,0,0,0,51.3924176781531,47.4134993602392,61.2998199380154,38.495112844986,43.1601987455505,51.3667850224996,45.9015300157628,45.4824415256463,60.7210828038834,52.8115517986856,2.07574695168353,7.98049746802062,7.5122786531819,5.10524105843418,7.33646069197938,6.80220981265052,8.88986911206461,7.62329711783909,8.66481865897901,5.30664144703975,10.3926512954998,10.3744487762342,7.21039607518095,8.45132011744274,7.69635284005218,7.62069906052918,7.88013416425017,5.01563973205633,7.00546031365621,8.09594060739185,5.82877729055206,6.92155644021416,9.53744759789284,7.84870649814574,8.84628175904108,6.26148098398406,7.13419094203813,4.99832451731901,8.41985505844343,9.53941861818155,5.93175090620871,5.91026894253381,9.41231399290286,9.45114731234393,5.5942917184531,10.9916654292696,6.78401664491684,5.58664740525576,2.67803664896381,1.10295709559758,0.695603506861264
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,6.29320347117916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,5.17022349219524,2.75320128242522,0.782391344348039,0.218025156380447,0,0.388859798148567,0.139986421625363,0,0,0,0,2.57259436035947,0.85960031981627,0.515672092277442,26.7057728334669,31.739458756322,20.9164363157039,0.677689064138264,1.77858959222228,0,0,0,0,0,39.6094319018385,34.021496459586,28.604194743788,12.2829923293636,16.3442720304194,30.5002090045236,19.3607851456837,19.3035945188104,33.0347642998166,19.5361627270337,21.3513081226178,30.2019598902144,28.5441448039518,32.8175423450759,16.4717969410815,16.8828783009504,14.8214300343506,37.4178303551558,30.6099113718071,39.5166825149637,0.454357159999104,1.81371744256285,0.289864488701678,0,0,0.539703191637817,0,0,0.561777680527007,1.36344258062446,0,0.70667914902068,1.54927761754349,0,0,0,0,0,0,0.79928715803342,0,0,1.04091196059682,1.52232739156071,0.691846491768175,1.50722640552623,1.88141931417128,0,0,0,0,0,0,0,0,19.3235326027621,14.6612694769419,0,0,0,0,19.9221550408414,19.2150253183823,35.4345272958278,32.678972196148,33.4987249102733,15.1685272528479,17.5220564113178,0.101839363850316,0,0,5.26104639716185,1.69156575851515,4.36813998423599,7.74267158163002,7.38453607395004,7.55205140579739,5.50888997224854,5.71580519814346,13.4525752784288,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.946978942340841,0.196764231747404,0.617068451549513,0.930135779001631,0,0.467061369468678,0.329119699826961,0.492502392237286,0,0.292399974850665,0.219550115291051,0,18.7158054222073,33.4439990232674,0,0,1.70630600428187,1.85789337488351,0.644337306610467,1.81515172161008,0.22237804384487,0.760902504450237,0,0.658795818896044,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,21.9954308283275,16.9956945558695,0,0,3.47059041357882,5.46614242015294,2.36965737506079,1.19484398976276,1.11399337041197,2.54768877709949,2.02405350837447,4.9683495844923,5.13874111330481,11.5675673911851,0.283880170416537,0.35613120733451,0.325773918707152,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.900305470156551,0,1.71469628025274,2.30542303734956,1.60531935841864,3.45552943264454,2.13125464380219,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0,0.582961673259701,22.4364615432717,0,1.65109494370578,0.555583582109135,0,0,0,0,0,0,0,0.949007980743406,1.42323626988794,1.29606408986162,0.418176592028937,0.436725127492355,0.674321731924103,0.826534557253359,0.26175594198403,0,0,0,0,0.165458490457098,0.388902376688095,0.258319646955462,0.675824501963113,0.58678619322877,0.13020438484395,0.314578033277133,0,0,0,1.01362607645082,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.772758376128762,0,0,0,0,51.3924176781531,47.4134993602392,61.2998199380154,38.495112844986,43.1601987455505,51.3667850224996,45.9015300157628,45.4824415256463,60.7210828038834,52.8115517986856,2.07574695168353,7.98049746802062,7.5122786531819,5.10524105843418,7.33646069197938,6.80220981265052,8.88986911206461,7.62329711783909,8.66481865897901,5.30664144703975,10.3926512954998,10.3744487762342,7.21039607518095,8.45132011744274,7.69635284005218,7.62069906052918,7.88013416425017,5.01563973205633,7.00546031365621,8.09594060739185,5.82877729055206,6.92155644021416,9.53744759789284,7.84870649814574,8.84628175904108,6.26148098398406,7.13419094203813,4.99832451731901,8.41985505844343,9.53941861818155,5.93175090620871,5.91026894253381,9.41231399290286,9.45114731234393,5.5942917184531,10.9916654292696,6.78401664491684,5.58664740525576,2.67803664896381,1.10295709559758,0.695603506861264
|short_description=p1@Hecw1
}}
}}

Latest revision as of 04:47, 27 September 2015

Short description:p1@Hecw1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hecw1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 60bp_to_ENSMUST00000110516, NM_001081348, uc007pnd.2, uc007png.2, uc007pnh.2, uc007pni.2, uc011ywk.1_5end
EntrezGene:Hecw1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hecw1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C326.71
Mouse Granule cells, donor2.CNhs12357.11731-123E331.74
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D539.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F534.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.60
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.36
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D333.03
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.54
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D430.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.54
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.82
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D637.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.61
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E139.52
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I214.66
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A419.92
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F135.43
cortex, adult.CNhs10473.12-14D532.68
cortex, neonate N30.CNhs11107.1392-42F233.50
diencephalon, adult.CNhs10482.20-12F215.17
diencephalon, neonate N30.CNhs11201.1388-42B217.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D47.38
eyeball, neonate N00.CNhs11207.633-15C67.55
eyeball, neonate N01.CNhs11140.1532-43E75.51
eyeball, neonate N02.CNhs11205.1551-44G85.72
eyeball, neonate N16.CNhs11188.777-19A213.45
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E818.72
hippocampus, neonate N00.CNhs11228.627-43G133.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C222.00
medulla oblongata, neonate N30.CNhs11200.1396-42A317.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C922.44
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A151.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A247.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A361.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.16
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A551.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A645.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A745.48
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A860.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A952.81
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H27.51
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.85
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.45
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I510.99
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.98e-2033
neuronal stem cell5.98e-2033
neuroblast5.98e-2033
electrically signaling cell5.98e-2033
electrically responsive cell3.50e-1939
electrically active cell3.50e-1939
CNS neuron (sensu Vertebrata)1.39e-1823
neuroblast (sensu Vertebrata)1.39e-1823
ectodermal cell2.34e-1344
neurectodermal cell2.34e-1344
neural cell3.41e-1343

Uber anatomy
Ontology termp-valuen
central nervous system3.83e-3273
neurectoderm6.65e-3264
neural plate6.65e-3264
presumptive neural plate6.65e-3264
nervous system1.27e-3175
ectoderm-derived structure1.54e-2995
ectoderm1.54e-2995
presumptive ectoderm1.54e-2995
regional part of nervous system1.19e-2854
neural tube5.67e-2752
neural rod5.67e-2752
future spinal cord5.67e-2752
neural keel5.67e-2752
ecto-epithelium5.73e-2773
gray matter3.16e-2534
pre-chordal neural plate1.21e-2449
brain8.97e-2347
future brain8.97e-2347
regional part of brain3.91e-2246
brain grey matter3.28e-2129
regional part of telencephalon3.28e-2129
telencephalon3.28e-2129
anterior neural tube5.20e-2140
regional part of forebrain2.92e-2039
forebrain2.92e-2039
future forebrain2.92e-2039
structure with developmental contribution from neural crest3.17e-2092
cerebral cortex3.10e-1521
cerebral hemisphere3.10e-1521
pallium3.10e-1521
regional part of cerebral cortex6.63e-1217
occipital lobe8.18e-1110
visual cortex8.18e-1110
neocortex8.18e-1110
basal ganglion3.91e-078
nuclear complex of neuraxis3.91e-078
aggregate regional part of brain3.91e-078
collection of basal ganglia3.91e-078
cerebral subcortex3.91e-078
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