FFCP PHASE1:Mm9::chr1:51535234..51535250,-: Difference between revisions
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{{FFCP|EntrezGene=109019|HGNC=|MCL_coexpression_id=233|UniProt=Q8BGW5|association_with_transcript=0bp_to_ENSMUST00000027279,NM_028696,uc007axm.1,uc007axn.1,uc007axp.1_5end|description=CAGE_peak_1_at_Obfc2a_5end|id=chr1:51535234..51535250,-|ontology_enrichment_celltype=CL:0000838!3.27e-07!12;CL:0000791!7.56e-07!9;CL:0000789!7.56e-07!9;CL:0002420!7.56e-07!9;CL:0002419!7.56e-07!9;CL:0000790!7.56e-07!9;CL:0000084!8.61e-07!11;CL:0000827!8.61e-07!11|ontology_enrichment_celltype_v019_2=CL:0000838,3.27e-07,12;CL:0000791,7.56e-07,9;CL:0000789,7.56e-07,9;CL:0002420,7.56e-07,9;CL:0002419,7.56e-07,9;CL:0000790,7.56e-07,9;CL:0000084,8.61e-07,11;CL:0000827,8.61e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000072!8.19e-11!27;UBERON:0003408!1.01e-10!24;UBERON:0002370!2.70e-10!23;UBERON:0000974!2.70e-10!23;UBERON:0004807!2.70e-10!23;UBERON:0005058!2.70e-10!23;UBERON:0003351!2.70e-10!23;UBERON:0009113!2.70e-10!23;UBERON:0003295!2.70e-10!23;UBERON:0009722!2.70e-10!23;UBERON:0005562!2.70e-10!23;UBERON:0007690!2.70e-10!23;UBERON:0006562!5.84e-10!24;UBERON:0001557!5.84e-10!24;UBERON:0001042!5.84e-10!24;UBERON:0008814!5.84e-10!24;UBERON:0009145!5.84e-10!24;UBERON:0004177!1.00e-09!29;UBERON:0000490!2.23e-09!66;UBERON:0001004!1.24e-07!42;UBERON:0003929!1.32e-07!55;UBERON:0000065!2.90e-07!41;UBERON:0002390!5.90e-07!45;UBERON:0003061!5.90e-07!45;UBERON:0000926!5.90e-07!193;UBERON:0004120!5.90e-07!193;UBERON:0006603!5.90e-07!193;UBERON:0002193!9.31e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0000077,4.15e-11,35;UBERON:0000072,8.19e-11,27;UBERON:0003408,1.01e-10,24;UBERON:0002370,2.70e-10,23;UBERON:0000974,2.70e-10,23;UBERON:0004807,2.70e-10,23;UBERON:0005058,2.70e-10,23;UBERON:0003351,2.70e-10,23;UBERON:0009113,2.70e-10,23;UBERON:0003295,2.70e-10,23;UBERON:0009722,2.70e-10,23;UBERON:0005562,2.70e-10,23;UBERON:0007690,2.70e-10,23;UBERON:0006562,5.84e-10,24;UBERON:0001557,5.84e-10,24;UBERON:0001042,5.84e-10,24;UBERON:0008814,5.84e-10,24;UBERON:0009145,5.84e-10,24;UBERON:0004177,1.00e-09,29;UBERON:0005057,1.00e-09,29;UBERON:0000490,2.23e-09,66;UBERON:0000926,1.60e-08,120;UBERON:0004120,1.60e-08,120;UBERON:0006603,1.60e-08,120;UBERON:0001004,1.24e-07,42;UBERON:0003929,1.32e-07,55;UBERON:0000065,2.90e-07,41;UBERON:0002390,5.90e-07,45;UBERON:0003061,5.90e-07,45;UBERON:0002193,9.31e-07,48;UBERON:0002405,9.31e-07,48|phase1_expression=9.28863313207805,121.792417266137,99.1898341869189,162.423281471768,181.324254240578,44.3201277847389,38.3124730576662,249.337137565684,402.374167909464,443.552277380178,312.472792011547,273.778049671995,222.732149640499,135.414203347027,20.6528052325711,18.4252493324742,7.69518065940961,72.8717601977529,72.2593065102243,76.3901373236454,100.94638540932,35.6454514811178,49.1055603581199,16.3192271249275,15.3704218315004,62.5912840885372,33.5994357004078,37.2765232546588,15.0118501370535,12.8535366177565,11.9734475753865,20.9560122241678,15.3766196896143,31.6963362030877,54.0152528934883,17.4546377626417,70.6425972667797,449.084439780702,392.230342950948,253.385492083318,1210.58040236783,698.072485627531,356.364599124867,31.9777917657966,33.0488795775617,58.184320435253,5.47673941043627,5.45062890951116,15.378032791413,15.1655321277941,5.87942970826523,2.87505128729943,97.1461289074294,262.581095408107,242.323629181717,45.2776607423267,60.1720223871389,74.2567812879517,6.27181028664753,5.28990979272033,3.80298842103708,15.9256930072492,8.89294796111139,14.3983954765024,25.7105254267413,18.4724829885986,6.2916023208865,4.61061966385865,3.42175720617976,3.24014251996058,2.3135745748652,3.42781181284564,5.74258206474195,4.5321595709533,3.1629005436018,4.5960939330501,4.40463523997555,7.66124028511126,9.06278546211836,4.2203612073662,2.56165402086747,7.29278718779464,8.65467296904281,12.380777420697,12.071061574368,6.18720029494702,8.11518580554887,5.59198337475902,29.3060368199422,9.97544593409569,159.715333274624,25.8127163094416,231.870224794343,25.3660500069774,48.0834548911275,43.0105811613442,46.6275474837416,30.3365974188943,18.4448063268037,22.2603931941514,15.7744630149882,48.7640614174408,30.5766287647975,49.7746692207332,56.9371437859493,60.5530078485486,59.6518845117444,49.0990682791958,96.0659548331007,37.7043033224655,8.50078101154066,21.9215144384742,26.9820131789588,25.9242941750511,17.0503625346772,70.7502909186073,105.057861287109,130.57321929868,24.7690954545965,9.05894359705491,19.2132121060542,27.1530141755724,48.4618579167118,13.7606974595427,9.00620839297857,20.6920214718959,54.156436276676,43.1929966315254,55.6567594580023,10.1857634795279,6.40500843946077,5.02617408451458,14.9488915365358,9.71718737855256,9.14267396062064,7.94982189032012,8.7581852911272,19.9051152976149,21.2287117084287,414.78089795224,11.0602376518298,17.7024620413774,14.4049703844279,13.7141384230501,8.64063539221864,11.6583485459213,7.40243624021858,138.147599974634,4.52692785158969,6.05139456537022,7.74184946321375,8.98702502953057,6.67313398141435,20.19862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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109019 | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGW5 | |||
|association_with_transcript=0bp_to_ENSMUST00000027279,NM_028696,uc007axm.1,uc007axn.1,uc007axp.1_5end | |||
|cluster_id=chr1:51535234..51535250,- | |||
|description=CAGE_peak_1_at_Obfc2a_5end | |||
|id=chr1:51535234..51535250,- | |||
|ontology_enrichment_celltype=CL:0000838!3.27e-07!12;CL:0000791!7.56e-07!9;CL:0000789!7.56e-07!9;CL:0002420!7.56e-07!9;CL:0002419!7.56e-07!9;CL:0000790!7.56e-07!9;CL:0000084!8.61e-07!11;CL:0000827!8.61e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.27e-07,12;CL:0000791,7.56e-07,9;CL:0000789,7.56e-07,9;CL:0002420,7.56e-07,9;CL:0002419,7.56e-07,9;CL:0000790,7.56e-07,9;CL:0000084,8.61e-07,11;CL:0000827,8.61e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!8.19e-11!27;UBERON:0003408!1.01e-10!24;UBERON:0002370!2.70e-10!23;UBERON:0000974!2.70e-10!23;UBERON:0004807!2.70e-10!23;UBERON:0005058!2.70e-10!23;UBERON:0003351!2.70e-10!23;UBERON:0009113!2.70e-10!23;UBERON:0003295!2.70e-10!23;UBERON:0009722!2.70e-10!23;UBERON:0005562!2.70e-10!23;UBERON:0007690!2.70e-10!23;UBERON:0006562!5.84e-10!24;UBERON:0001557!5.84e-10!24;UBERON:0001042!5.84e-10!24;UBERON:0008814!5.84e-10!24;UBERON:0009145!5.84e-10!24;UBERON:0004177!1.00e-09!29;UBERON:0000490!2.23e-09!66;UBERON:0001004!1.24e-07!42;UBERON:0003929!1.32e-07!55;UBERON:0000065!2.90e-07!41;UBERON:0002390!5.90e-07!45;UBERON:0003061!5.90e-07!45;UBERON:0000926!5.90e-07!193;UBERON:0004120!5.90e-07!193;UBERON:0006603!5.90e-07!193;UBERON:0002193!9.31e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000077,4.15e-11,35;UBERON:0000072,8.19e-11,27;UBERON:0003408,1.01e-10,24;UBERON:0002370,2.70e-10,23;UBERON:0000974,2.70e-10,23;UBERON:0004807,2.70e-10,23;UBERON:0005058,2.70e-10,23;UBERON:0003351,2.70e-10,23;UBERON:0009113,2.70e-10,23;UBERON:0003295,2.70e-10,23;UBERON:0009722,2.70e-10,23;UBERON:0005562,2.70e-10,23;UBERON:0007690,2.70e-10,23;UBERON:0006562,5.84e-10,24;UBERON:0001557,5.84e-10,24;UBERON:0001042,5.84e-10,24;UBERON:0008814,5.84e-10,24;UBERON:0009145,5.84e-10,24;UBERON:0004177,1.00e-09,29;UBERON:0005057,1.00e-09,29;UBERON:0000490,2.23e-09,66;UBERON:0000926,1.60e-08,120;UBERON:0004120,1.60e-08,120;UBERON:0006603,1.60e-08,120;UBERON:0001004,1.24e-07,42;UBERON:0003929,1.32e-07,55;UBERON:0000065,2.90e-07,41;UBERON:0002390,5.90e-07,45;UBERON:0003061,5.90e-07,45;UBERON:0002193,9.31e-07,48;UBERON:0002405,9.31e-07,48 | |||
|phase1_expression=9.28863313207805,121.792417266137,99.1898341869189,162.423281471768,181.324254240578,44.3201277847389,38.3124730576662,249.337137565684,402.374167909464,443.552277380178,312.472792011547,273.778049671995,222.732149640499,135.414203347027,20.6528052325711,18.4252493324742,7.69518065940961,72.8717601977529,72.2593065102243,76.3901373236454,100.94638540932,35.6454514811178,49.1055603581199,16.3192271249275,15.3704218315004,62.5912840885372,33.5994357004078,37.2765232546588,15.0118501370535,12.8535366177565,11.9734475753865,20.9560122241678,15.3766196896143,31.6963362030877,54.0152528934883,17.4546377626417,70.6425972667797,449.084439780702,392.230342950948,253.385492083318,1210.58040236783,698.072485627531,356.364599124867,31.9777917657966,33.0488795775617,58.184320435253,5.47673941043627,5.45062890951116,15.378032791413,15.1655321277941,5.87942970826523,2.87505128729943,97.1461289074294,262.581095408107,242.323629181717,45.2776607423267,60.1720223871389,74.2567812879517,6.27181028664753,5.28990979272033,3.80298842103708,15.9256930072492,8.89294796111139,14.3983954765024,25.7105254267413,18.4724829885986,6.2916023208865,4.61061966385865,3.42175720617976,3.24014251996058,2.3135745748652,3.42781181284564,5.74258206474195,4.5321595709533,3.1629005436018,4.5960939330501,4.40463523997555,7.66124028511126,9.06278546211836,4.2203612073662,2.56165402086747,7.29278718779464,8.65467296904281,12.380777420697,12.071061574368,6.18720029494702,8.11518580554887,5.59198337475902,29.3060368199422,9.97544593409569,159.715333274624,25.8127163094416,231.870224794343,25.3660500069774,48.0834548911275,43.0105811613442,46.6275474837416,30.3365974188943,18.4448063268037,22.2603931941514,15.7744630149882,48.7640614174408,30.5766287647975,49.7746692207332,56.9371437859493,60.5530078485486,59.6518845117444,49.0990682791958,96.0659548331007,37.7043033224655,8.50078101154066,21.9215144384742,26.9820131789588,25.9242941750511,17.0503625346772,70.7502909186073,105.057861287109,130.57321929868,24.7690954545965,9.05894359705491,19.2132121060542,27.1530141755724,48.4618579167118,13.7606974595427,9.00620839297857,20.6920214718959,54.156436276676,43.1929966315254,55.6567594580023,10.1857634795279,6.40500843946077,5.02617408451458,14.9488915365358,9.71718737855256,9.14267396062064,7.94982189032012,8.7581852911272,19.9051152976149,21.2287117084287,414.78089795224,11.0602376518298,17.7024620413774,14.4049703844279,13.7141384230501,8.64063539221864,11.6583485459213,7.40243624021858,138.147599974634,4.52692785158969,6.05139456537022,7.74184946321375,8.98702502953057,6.67313398141435,20.1986256582857,20.1666493679785,18.3111525473014,20.3641824320838,25.9921386185862,47.1711408996684,13.8774267598786,15.4787199587523,16.3856475929524,17.992599904476,25.3825858954151,27.1510118681786,43.9489155578271,40.2410102099429,36.0804907914554,28.7979737348591,49.7427416159659,48.884492156151,57.7489950330063,67.6214355096436,61.6007462110106,21.6598647021051,12.1427442607556,40.6415103070072,24.3294521330461,6.61193576659225,11.8440702648824,13.9176858227861,18.5548842653475,31.1329261382818,31.5774539346848,19.455691523325,21.7402620235694,22.6201687920243,14.3248659869629,23.7856186285327,16.178749355776,17.0749059401008,15.3338780405863,9.293727146701,15.0808036644842,31.5581659884625,34.6207257337034,46.1606919458949,40.5385038966041,45.0244144324712,84.1377843483732,111.469096767376,80.9485395327011,32.9062416066735,8.5091003915208,8.25547779475453,11.2431056192427,14.6059287399722,18.5706413009361,28.0088436959562,33.372751944294,13.4572238223279,13.7280706594041,37.3797336971122,24.1891615984527,20.594486425561,12.6289438973556,33.0091240880318,19.7801843758981,51.5461400564827,5.11626811780309,5.37784422258685,7.97801903143384,10.3263709246941,24.2884073290633,32.6119788013839,26.5381761086606,24.1181770482472,21.0391455166336,21.2074842314458,54.2387571709093,53.5323443784276,45.7091025117577,46.7452980211744,33.1782467129413,134.743410807216,76.4344787264109,7.86697890940181,5.97779601620236,11.9672510124973,29.2866275557073,20.1925260426404,16.7888660047555,9.26320610251035,10.7535959078648,11.8083297263669,7.35998980050964,14.1683745586213,21.3346776275258,13.8350722281283,12.8528526568723,24.9814549966553,12.9987890677096,11.0763132360432,19.3015043877867,11.9470624505967,15.0523994416088,15.1161778482376,17.5402724172985,12.4026795009925,25.2096821314021,18.3484088149437,13.8142817201452,9.62542921638748,17.0659849285341,13.7044191147498,6.18813259489121,10.8940673841212,9.72329907769075,6.59729287292048,5.35842587578981,14.3645589250242,14.4478742257677,13.3284706687718,5.48036908406279,157.699387818813,121.379776604969,7.27743713581374,75.3530175942564,10.8181165886257,56.9354011321791,47.5101929132483,88.1436631630979,25.6503136234269,12.4234952347041,44.2555581266438,54.0733594063643,45.7430482603188,18.4601087864597,22.0077706630851,27.2246026115762,88.3887835968048,82.1515025139872,79.0503850161304,57.2802370809068,15.5004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| |||
|short_description=p1@Obfc2a | |||
}} |
Latest revision as of 04:50, 27 September 2015
Short description: | p1@Obfc2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Obfc2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | 0bp_to_ENSMUST00000027279, NM_028696, uc007axm.1, uc007axn.1, uc007axp.1_5end |
EntrezGene: | Obfc2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.27e-07 | 12 |
mature alpha-beta T cell | 7.56e-07 | 9 |
alpha-beta T cell | 7.56e-07 | 9 |
immature T cell | 7.56e-07 | 9 |
mature T cell | 7.56e-07 | 9 |
immature alpha-beta T cell | 7.56e-07 | 9 |
T cell | 8.61e-07 | 11 |
pro-T cell | 8.61e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
mixed endoderm/mesoderm-derived structure | 4.15e-11 | 35 |
segment of respiratory tract | 8.19e-11 | 27 |
gland of gut | 1.01e-10 | 24 |
thymus | 2.70e-10 | 23 |
neck | 2.70e-10 | 23 |
respiratory system epithelium | 2.70e-10 | 23 |
hemolymphoid system gland | 2.70e-10 | 23 |
pharyngeal epithelium | 2.70e-10 | 23 |
thymic region | 2.70e-10 | 23 |
pharyngeal gland | 2.70e-10 | 23 |
entire pharyngeal arch endoderm | 2.70e-10 | 23 |
thymus primordium | 2.70e-10 | 23 |
early pharyngeal endoderm | 2.70e-10 | 23 |
pharynx | 5.84e-10 | 24 |
upper respiratory tract | 5.84e-10 | 24 |
chordate pharynx | 5.84e-10 | 24 |
pharyngeal arch system | 5.84e-10 | 24 |
pharyngeal region of foregut | 5.84e-10 | 24 |
hemopoietic organ | 1.00e-09 | 29 |
immune organ | 1.00e-09 | 29 |
unilaminar epithelium | 2.23e-09 | 66 |
mesoderm | 1.60e-08 | 120 |
mesoderm-derived structure | 1.60e-08 | 120 |
presumptive mesoderm | 1.60e-08 | 120 |
respiratory system | 1.24e-07 | 42 |
gut epithelium | 1.32e-07 | 55 |
respiratory tract | 2.90e-07 | 41 |
hematopoietic system | 5.90e-07 | 45 |
blood island | 5.90e-07 | 45 |
hemolymphoid system | 9.31e-07 | 48 |
immune system | 9.31e-07 | 48 |