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FFCP PHASE1:Mm9::chr4:70195938..70196021,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:70195938..70196021,-
|DHSsupport=NA
|short_description=p1@Megf9
|DPIdataset=NA
|description=CAGE_peak_1_at_Megf9_5end
|association_with_transcript=0bp_to_ENSMUST00000107359,NM_172694,uc008tib.1_5end
|EntrezGene=230316
|EntrezGene=230316
|HGNC=
|HGNC=
|MCL_coexpression_id=552
|TSSclassifier=NA
|UniProt=Q8BH27,Q0VGR4
|UniProt=Q8BH27,Q0VGR4
|association_with_transcript=0bp_to_ENSMUST00000107359,NM_172694,uc008tib.1_5end
|cluster_id=chr4:70195938..70196021,-
|description=CAGE_peak_1_at_Megf9_5end
|id=chr4:70195938..70196021,-
|ontology_enrichment_celltype=CL:0000540!1.63e-12!33;CL:0000047!1.63e-12!33;CL:0000031!1.63e-12!33;CL:0000404!1.63e-12!33;CL:0000221!8.78e-12!44;CL:0000133!8.78e-12!44;CL:0002319!2.83e-11!43;CL:0000117!1.70e-10!23;CL:0000337!1.70e-10!23;CL:0000393!7.46e-10!39;CL:0000211!7.46e-10!39;CL:0000055!3.41e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.63e-12,33;CL:0000047,1.63e-12,33;CL:0000031,1.63e-12,33;CL:0000404,1.63e-12,33;CL:0000221,8.78e-12,44;CL:0000133,8.78e-12,44;CL:0002319,2.83e-11,43;CL:0000117,1.70e-10,23;CL:0000337,1.70e-10,23;CL:0000393,7.45e-10,39;CL:0000211,7.45e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.69e-23!102;UBERON:0000924!1.69e-23!102;UBERON:0006601!1.69e-23!102;UBERON:0000073!1.53e-21!75;UBERON:0001016!1.53e-21!75;UBERON:0001017!1.65e-20!73;UBERON:0005743!1.65e-20!73;UBERON:0000033!3.89e-18!63;UBERON:0002346!2.64e-17!71;UBERON:0003075!2.64e-17!71;UBERON:0007284!2.64e-17!71;UBERON:0002020!1.55e-16!34;UBERON:0001049!8.76e-16!52;UBERON:0005068!8.76e-16!52;UBERON:0006241!8.76e-16!52;UBERON:0007135!8.76e-16!52;UBERON:0000955!2.63e-15!50;UBERON:0006238!2.63e-15!50;UBERON:0002616!6.34e-15!49;UBERON:0003056!1.07e-14!49;UBERON:0002791!1.59e-14!29;UBERON:0003528!1.59e-14!29;UBERON:0001893!1.59e-14!29;UBERON:0003080!3.52e-12!40;UBERON:0002780!9.70e-12!39;UBERON:0001890!9.70e-12!39;UBERON:0006240!9.70e-12!39;UBERON:0000956!3.16e-11!21;UBERON:0001869!3.16e-11!21;UBERON:0000203!3.16e-11!21;UBERON:0002619!2.35e-09!17;UBERON:0004111!4.04e-09!122;UBERON:0000025!5.03e-09!114;UBERON:0000475!6.70e-09!200;UBERON:0007811!1.53e-07!86;UBERON:0000153!1.58e-07!94;UBERON:0002021!4.95e-07!10;UBERON:0000411!4.95e-07!10;UBERON:0001950!4.95e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.79e-25,95;UBERON:0000924,2.79e-25,95;UBERON:0006601,2.79e-25,95;UBERON:0001016,1.53e-21,75;UBERON:0010371,3.85e-21,73;UBERON:0001017,1.65e-20,73;UBERON:0002346,2.27e-19,64;UBERON:0003075,2.27e-19,64;UBERON:0007284,2.27e-19,64;UBERON:0000073,5.01e-17,54;UBERON:0002020,1.55e-16,34;UBERON:0001049,8.76e-16,52;UBERON:0005068,8.76e-16,52;UBERON:0006241,8.76e-16,52;UBERON:0007135,8.76e-16,52;UBERON:0003056,1.07e-14,49;UBERON:0003528,1.59e-14,29;UBERON:0002791,1.59e-14,29;UBERON:0001893,1.59e-14,29;UBERON:0000955,1.53e-13,47;UBERON:0006238,1.53e-13,47;UBERON:0002616,3.59e-13,46;UBERON:0003080,3.52e-12,40;UBERON:0010314,7.09e-12,92;UBERON:0002780,9.70e-12,39;UBERON:0001890,9.70e-12,39;UBERON:0006240,9.70e-12,39;UBERON:0000956,3.16e-11,21;UBERON:0001869,3.16e-11,21;UBERON:0000203,3.16e-11,21;UBERON:0002619,2.35e-09,17;UBERON:0004111,4.04e-09,122;UBERON:0000025,5.03e-09,114;UBERON:0002021,4.95e-07,10;UBERON:0000411,4.95e-07,10;UBERON:0001950,4.95e-07,10;UBERON:0000483,5.26e-07,174
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467153471,17.262636337257,19.67152246263,15.9671124610258,8.03612834409116,4.34937519160848,15.2197093444731,9.56905894681464,6.783798108741,8.36140109879405,10.3327858782185,11.8269287843545,15.9605844558225,14.9735042570543,15.2046049417281,15.4613837328644,12.9613502816039,13.2724670663835,7.9062833963164,8.01145465885653,9.35429925440124,11.9947886097213,13.3116507703447,11.1781768053571,9.89519832069667,13.1256384932592,11.659641418215,12.8049255123787,14.5212242302231,11.5454209968395,12.1551978268832,39.677817132662,1.10992976687032,1.07656627931371,0.335769232728157,27.2397327585389,6.94425159169373,8.24182309202693,28.2966260384367,4.01257683228291,73.9824913828357,64.4455331110048,50.4148051826669,53.2744865265432,69.1933344968349,91.4026615841538,68.8522950236442,86.4616710190503,72.5027854374727,76.6285261392694,9.3408612825759,31.5229649986815,18.7806966329548,24.5537784238977,11.738337107167,15.6266982182512,19.5577120465421,21.6336810100839,23.7480215097943,20.2157769411038,24.5874920893533,23.2010399904874,22.286678777832,28.0430167533327,32.0489916772322,27.1487404031352,23.1768651889711,24.3065617784268,31.7306143618546,20.9022466590844,18.8578088811978,22.1844757699172,20.028639955575,21.6566160782169,21.7392668759414,23.015173346536,24.8782043106971,23.1501346065302,22.5434828984131,12.906272248128,22.8965584979656,25.3156519705198,19.2338590289754,22.0010314484072,28.3572718142278,27.9787847290499,24.7967504952133,31.3711738910516,18.363679878609,28.4562930664175,22.02744438394
|phase1_expression=24.1824759128239,30.0118850569851,22.2949627300873,2.72217790176147,5.00895729946347,23.3352187957527,18.9226238882376,3.35720640948098,1.12630977721333,4.21316147379588,0.34243593645101,0.239316476986009,3.59521532855532,2.79745287740792,5.3297561890506,5.87178275430495,3.49780939064073,2.83915948822414,2.4680598049033,2.12194825899015,26.9587229778891,2.28369187762036,2.61199789138935,11.0394771727451,11.2410547722913,21.2465826722557,19.8150518233174,18.0995835456147,8.36103045608045,10.0812051903972,20.399206980288,5.71527606113668,3.07532393792285,0,2.88851619751275,1.32987716286794,3.67504841272264,185.40951241645,106.261606855237,157.580646936113,228.233817356034,223.355873581412,232.559459101923,13.3450627054112,8.81979301609777,6.05704282133549,3.9119567217402,18.9681886050988,20.6505011770404,43.3578674935652,10.0790223570261,10.062679505548,3.35565212115473,3.62681071005672,2.01656279485478,11.0621557495457,18.3381401560804,15.9858348606007,47.9490012237247,39.6743234454025,38.0298842103708,4.06613438482959,1.77858959222228,1.7997994345628,3.9554654502679,0.7104801149461,11.9840044207362,26.1268447618657,57.962493280439,42.7968824511459,50.4779907243317,35.7063730504754,32.9094126017904,48.3838656899068,45.814135146717,36.7687514644008,60.5637345496638,95.5101288877204,81.1042495592965,44.8413378282659,50.7756421993374,53.1331637967895,41.5982668512058,27.5753678915523,47.9786498019184,59.2203456802072,57.9452740852349,46.0406631188492,41.3465015599185,70.5082655796309,8.11620568364698,18.0689014166091,9.51959867190851,25.9057531986152,35.7377029596218,25.5375325645481,19.3813299781818,3.2381761289831,1.55871602761721,2.82671659608272,64.787973097273,5.13305909657271,0,0,3.030874574157,2.28023878927589,2.02209778005913,23.2935114626882,9.06282592765101,13.8051189330287,11.7970022200972,11.5696881758614,11.761390360059,12.0578112442098,14.9337658062345,24.002318943968,6.17987419335935,34.7038456607788,48.6535803572431,15.2060838950565,15.4589062922275,17.9403843660032,24.2309289583559,63.2406521544942,83.1503426049417,7.40825460104915,4.07371423320129,4.19931911695385,6.22644112658017,50.0300735612108,55.8150735438724,71.4973263522198,71.0941469586411,78.2489299430811,76.050424308799,60.0292673350703,18.8402823123085,18.0390107384635,9.85618757891331,79.5470215250872,14.1831282829347,24.1397209655147,34.2118046630164,30.7437828384859,47.3534034093242,43.8148923374186,38.1366018958096,48.3775303281959,14.2274875335676,17.2086532952716,17.7710635405588,11.1789823538063,19.7413546950174,34.8252166522167,31.8962311432312,10.1507476077432,3.51106593656617,5.91900186363845,9.09323198065896,8.90640821902658,6.0976775595085,6.30217215113552,7.81257627431194,7.47704080640135,8.17615698303105,6.51095045301142,9.12129564758705,6.53885917256149,13.9875872426458,11.6558899496158,19.0511702432761,11.9883989688773,12.2948064562988,12.6154033634749,84.1159794256509,67.0938072712934,2.31293148088659,7.66906643324278,12.797295032114,12.3085436086032,10.5671318284117,9.07575860805041,7.33847544688072,6.08722003560189,7.11793592316767,7.41145296258049,5.27803938480566,8.35617182572834,4.67913809085888,4.49409704327111,7.5648317456143,5.57595565112228,13.6560888686219,15.8805432527523,15.7790829942313,16.4957575554705,17.4557238450863,20.8303385074246,16.0620804295614,17.2703873136135,17.7408562460754,13.4502908674763,19.862326014839,7.50802975722423,10.2210677458866,8.99448449539415,13.7944882544182,17.1235783424216,14.0044218479781,26.7557407829254,48.4784328057356,13.1789478330279,50.3188722845741,24.1891615984527,24.6509761760503,36.3713584243841,26.1920223741992,41.0076993158862,29.7452636168234,11.9379589415405,10.7556884451737,10.6939404038369,10.7957514212711,16.4156132292979,16.1869675802489,26.147908812945,20.9654741661234,24.8040452406628,24.874943910568,26.3819936692338,29.0110769534705,28.6405135991393,0,1.63171705145613,4.42587845717133,4.41498794087572,48.646828766301,49.4633317419097,14.7541450839008,11.1087207969924,24.2941328950518,32.406415776621,45.4543369216206,29.3931621481639,31.8602103937824,36.5168724717594,38.8618273607899,23.380468632905,26.4842811224171,42.4144137676785,11.7810270722863,10.1497394090335,19.0577742443684,9.07335676348945,18.5843193675948,6.31229654002952,8.16273603804828,5.65815239267694,5.02013217897314,11.0676653259814,12.9214146584111,9.81541069589265,11.7644134866958,13.9056173491759,8.4334886859999,7.21948802737308,15.3197822589205,12.6042765821917,5.43306471887569,9.21649250635847,14.3645589250242,13.1992925025532,15.3030589159972,16.1366423030738,7.27482294997502,10.591603543191,7.49796553386871,88.3790315766333,51.0227588359062,56.0307072582568,54.9112782414428,67.9543324944554,5.24665505933731,70.0907641599727,13.3279287022325,9.49379592630823,14.0747840800981,13.9392658183471,14.0795054552656,9.83746144788047,4.75939603982795,5.318155188299,6.21899882119907,12.4107180341965,20.4036715859832,18.5020715085432,12.5286195353289,16.517975385143,15.940467153471,17.262636337257,19.67152246263,15.9671124610258,8.03612834409116,4.34937519160848,15.2197093444731,9.56905894681464,6.783798108741,8.36140109879405,10.3327858782185,11.8269287843545,15.9605844558225,14.9735042570543,15.2046049417281,15.4613837328644,12.9613502816039,13.2724670663835,7.9062833963164,8.01145465885653,9.35429925440124,11.9947886097213,13.3116507703447,11.1781768053571,9.89519832069667,13.1256384932592,11.659641418215,12.8049255123787,14.5212242302231,11.5454209968395,12.1551978268832,39.677817132662,1.10992976687032,1.07656627931371,0.335769232728157,27.2397327585389,6.94425159169373,8.24182309202693,28.2966260384367,4.01257683228291,73.9824913828357,64.4455331110048,50.4148051826669,53.2744865265432,69.1933344968349,91.4026615841538,68.8522950236442,86.4616710190503,72.5027854374727,76.6285261392694,9.3408612825759,31.5229649986815,18.7806966329548,24.5537784238977,11.738337107167,15.6266982182512,19.5577120465421,21.6336810100839,23.7480215097943,20.2157769411038,24.5874920893533,23.2010399904874,22.286678777832,28.0430167533327,32.0489916772322,27.1487404031352,23.1768651889711,24.3065617784268,31.7306143618546,20.9022466590844,18.8578088811978,22.1844757699172,20.028639955575,21.6566160782169,21.7392668759414,23.015173346536,24.8782043106971,23.1501346065302,22.5434828984131,12.906272248128,22.8965584979656,25.3156519705198,19.2338590289754,22.0010314484072,28.3572718142278,27.9787847290499,24.7967504952133,31.3711738910516,18.363679878609,28.4562930664175,22.02744438394
|short_description=p1@Megf9
}}
}}

Latest revision as of 05:06, 27 September 2015

Short description:p1@Megf9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Megf9_5end
Coexpression cluster:MCL_coexpression_mm9:552
Association with transcript: 0bp_to_ENSMUST00000107359, NM_172694, uc008tib.1_5end
EntrezGene:Megf9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Megf9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I530.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I622.29
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.92
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.24
GP2+ M cell, pool1.CNhs13228.11845-124H921.25
GP2+ M cell, pool2.CNhs13231.11846-124I119.82
GP2+ M cell, pool3.CNhs13240.11847-124I218.10
Ileum epithelium, pool1.CNhs13199.10252-104B98.36
Ileum epithelium, pool2.CNhs13232.10253-104C110.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C820.40
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8185.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1106.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3157.58
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9228.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2223.36
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4232.56
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.97
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.65
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C343.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.99
Mouse Granule cells, donor1.CNhs12131.11713-123C347.95
Mouse Granule cells, donor2.CNhs12357.11731-123E339.67
Mouse Granule cells, donor3.CNhs12108.11636-122C738.03
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C811.98
Mouse Microglia, donor2.CNhs12634.11736-123E826.13
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D557.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F542.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D950.48
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F135.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.91
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D248.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F245.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D636.77
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D360.56
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F395.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D781.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D444.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F450.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D853.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E441.60
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I647.98
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D659.22
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F657.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E146.04
Mouse Schwann, donor1.CNhs12507.11728-123D941.35
Mouse Schwann, donor2.CNhs12573.11746-123F970.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C825.91
Mouse hepatocyte, donor6.CNhs13090.11822-124F435.74
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G664.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.29
accessory axillary lymph node, adult.CNhs10475.1063-29H99.06
adrenal gland, adult.CNhs10508.49-24D713.81
adrenal gland, embryo E14.CNhs11038.406-44C511.80
adrenal gland, embryo E16.CNhs11004.1254-43D611.57
adrenal gland, embryo E17.CNhs11043.1263-45I111.76
adrenal gland, embryo E18.CNhs11026.1262-18F512.06
adrenal gland, neonate N00.CNhs11191.1311-23C114.93
adrenal gland, neonate N25.CNhs11223.1377-27I324.00
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H134.70
bone (os femoris), adult.CNhs10483.56-12G248.65
bone (os femoris), neonate N02.CNhs11227.1985-43F515.21
bone (os femoris), neonate N16.CNhs11225.1525-43A615.46
bone (os femoris), neonate N20.CNhs11195.1350-25C317.94
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B263.24
cerebellum, neonate N30.CNhs11135.1395-42I283.15
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.23
corpora quadrigemina, adult.CNhs10501.16-22A450.03
corpus striatum, adult.CNhs10487.19-21D855.82
corpus striatum, neonate N00.CNhs11226.630-43F171.50
cortex, adult.CNhs10473.12-14D571.09
cortex, neonate N30.CNhs11107.1392-42F278.25
diencephalon, adult.CNhs10482.20-12F276.05
diencephalon, neonate N30.CNhs11201.1388-42B260.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.04
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G479.55
eyeball, embryo E12.CNhs11016.345-16C614.18
eyeball, embryo E14.CNhs10521.399-16E224.14
eyeball, embryo E15.CNhs10593.426-16C934.21
eyeball, embryo E17.CNhs11023.1261-18D430.74
eyeball, neonate N00.CNhs11207.633-15C647.35
eyeball, neonate N01.CNhs11140.1532-43E743.81
eyeball, neonate N02.CNhs11205.1551-44G838.14
eyeball, neonate N16.CNhs11188.777-19A248.38
forelimb, embryo E11.CNhs10596.335-25E214.23
forelimb, embryo E12.CNhs10600.359-14H217.21
forelimb, embryo E13.CNhs10589.384-1E217.77
forelimb, embryo E14.CNhs10577.413-26A811.18
forelimb, embryo E15.CNhs11007.437-20E719.74
forelimb, embryo E17.CNhs10598.1517-43C434.83
forelimb, embryo E18.CNhs11008.1520-43B531.90
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E98.91
heart, embryo E12.CNhs11015.353-12F56.10
heart, embryo E13.CNhs11013.376-3I96.30
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C87.48
heart, embryo E16.CNhs11021.457-17C68.18
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E36.54
heart, neonate N03.CNhs11221.1349-25I213.99
heart, neonate N10.CNhs11118.749-24G111.66
heart, neonate N16.CNhs11209.782-15G119.05
heart, neonate N20.CNhs11127.821-26I611.99
heart, neonate N25.CNhs11196.1351-25D312.29
heart, neonate N30.CNhs11202.1390-42D212.62
hippocampus, adult.CNhs10478.13-16E884.12
hippocampus, neonate N00.CNhs11228.627-43G167.09
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A37.67
intestine, embryo E12.CNhs11019.1251-16I512.80
intestine, embryo E13.CNhs11010.381-16D512.31
intestine, embryo E15.CNhs10602.976-16D810.57
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F76.09
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E97.41
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F28.36
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E37.56
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I913.66
kidney, embryo E15.CNhs10997.434-16F815.88
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I216.50
kidney, embryo E18.CNhs11001.1288-20C717.46
kidney, neonate N00.CNhs11214.646-21G720.83
kidney, neonate N10.CNhs11206.758-6D516.06
kidney, neonate N20.CNhs11113.832-19I117.27
kidney, neonate N25.CNhs11122.1353-25F317.74
kidney, neonate N30.CNhs11203.1385-42H113.45
liver, adult pregnant day01.CNhs10466.508-5B219.86
liver, embryo E12.CNhs10601.355-15F87.51
liver, embryo E13.CNhs10524.378-3H610.22
liver, embryo E14.CNhs10594.409-16E18.99
liver, embryo E15.CNhs10520.433-16D713.79
liver, embryo E16.CNhs10523.462-17F517.12
liver, embryo E17.CNhs10510.481-18A314.00
liver, embryo E18.CNhs10579.499-43G426.76
liver, neonate N00.CNhs11117.641-24F448.48
liver, neonate N03.CNhs11123.1345-25G213.18
liver, neonate N06.CNhs11101.684-20A850.32
liver, neonate N07.CNhs11103.716-20H224.19
liver, neonate N10.CNhs11115.751-24B924.65
liver, neonate N20.CNhs11220.823-25A336.37
liver, neonate N25.CNhs11198.1368-26H126.19
liver, neonate N30.CNhs11106.1382-42D141.01
lung, adult.CNhs10474.28-22B129.75
lung, embryo E12.CNhs10522.354-16G211.94
lung, embryo E14.CNhs10604.404-26F810.76
lung, embryo E15.CNhs11020.432-17C510.69
lung, embryo E16.CNhs10998.458-17B610.80
lung, embryo E17.CNhs10605.480-44A616.42
lung, embryo E18.CNhs10583.1287-20I616.19
lung, neonate N00.CNhs11224.640-42C626.15
lung, neonate N06.CNhs11212.683-20E520.97
lung, neonate N07.CNhs11111.715-19A324.80
lung, neonate N10.CNhs11219.750-23E624.87
lung, neonate N20.CNhs11109.822-18A426.38
lung, neonate N25.CNhs11119.1359-25C729.01
lung, neonate N30.CNhs11133.1394-42H228.64
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C248.65
medulla oblongata, neonate N30.CNhs11200.1396-42A349.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.11
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E124.29
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E232.41
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E345.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D729.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D831.86
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D936.52
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D438.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.48
olfactory brain, adult.CNhs10489.18-22I942.41
ovary, adult.CNhs10507.91-2I711.78
ovary, embryo E18.CNhs11040.505-44H710.15
ovary, neonate N00.CNhs11217.1299-22I419.06
oviduct, adult pregnant day01.CNhs10500.988-6G69.07
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D811.76
pancreas, neonate N16.CNhs11136.787-43B613.91
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G815.32
pituitary gland, embryo E12.CNhs11018.346-16E612.60
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A59.22
pituitary gland, embryo E15.CNhs10592.427-16B914.36
pituitary gland, embryo E16.CNhs11036.449-43F613.20
pituitary gland, embryo E17.CNhs11039.1265-44F515.30
pituitary gland, neonate N00.CNhs11190.1308-22E916.14
placenta, adult pregnant day10.CNhs10472.539-13I77.27
placenta, adult pregnant day17.CNhs10464.577-18G310.59
prostate, adult.CNhs10470.859-1F87.50
skin, adult.CNhs10492.30-1C388.38
skin, neonate N00.CNhs11124.650-25G451.02
skin, neonate N03.CNhs11215.662-22H356.03
skin, neonate N06.CNhs11097.693-20I554.91
skin, neonate N10.CNhs11108.762-6C467.95
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C970.09
spleen, adult.CNhs10465.25-2G213.33
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F214.07
spleen, neonate N10.CNhs11116.752-24D113.94
spleen, neonate N20.CNhs11112.824-19H114.08
spleen, neonate N25.CNhs11099.1354-25G39.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.22
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E320.40
stomach, embryo E15.CNhs10603.1252-16G818.50
stomach, embryo E16.CNhs11022.459-17D412.53
stomach, embryo E17.CNhs11006.1035-18D516.52
stomach, embryo E18.CNhs10999.1286-20C615.94
stomach, neonate N03.CNhs11193.1340-24B817.26
stomach, neonate N07.CNhs11210.718-18A919.67
stomach, neonate N25.CNhs11104.1355-25E415.97
stomach, neonate N30.CNhs11134.1386-42I18.04
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G515.22
testis, embryo E13.CNhs11031.389-23F59.57
testis, embryo E15.CNhs11034.443-27C56.78
testis, embryo E16.CNhs11033.470-26G58.36
testis, embryo E17.CNhs11029.486-18I510.33
testis, embryo E18.CNhs11027.503-18G511.83
testis, neonate N00.CNhs11189.1300-22B715.96
testis, neonate N07.CNhs11222.726-26I414.97
testis, neonate N10.CNhs11204.763-44D915.20
testis, neonate N20.CNhs11110.839-18H315.46
testis, neonate N30.CNhs11130.1391-42E212.96
thymus, adult.CNhs10471.38-12B513.27
thymus, embryo E14.CNhs11041.402-44I47.91
thymus, embryo E15.CNhs11005.430-45I28.01
thymus, embryo E16.CNhs11002.456-26C59.35
thymus, embryo E17.CNhs10581.478-18C111.99
thymus, embryo E18.CNhs10595.1273-19G413.31
thymus, neonate N02.CNhs11181.1541-43F811.18
thymus, neonate N03.CNhs11137.2104-43C79.90
thymus, neonate N06.CNhs11197.681-26C413.13
thymus, neonate N07.CNhs11211.713-19D311.66
thymus, neonate N10.CNhs11194.748-24E412.80
thymus, neonate N20.CNhs11186.820-7A214.52
thymus, neonate N25.CNhs11125.1362-25G711.55
thymus, neonate N30.CNhs11132.1393-42G212.16
tongue, adult.CNhs10499.32-1B439.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E427.24
uterus, adult pregnant day19.CNhs10497.590-15F56.94
uterus, adult.CNhs10509.92-27E58.24
vagina, adult.CNhs10502.89-27D528.30
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A173.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A264.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A350.41
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D753.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A469.19
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A591.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A668.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A786.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A872.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A976.63
whole body, embryo E11.CNhs11014.324-5I89.34
whole body, embryo E12.CNhs10587.857-27C931.52
whole body, embryo E13.CNhs10512.372-23H218.78
whole body, embryo E14.5.CNhs10578.420-27D224.55
whole body, embryo E14.CNhs10519.395-14B111.74
whole body, embryo E16.CNhs10514.453-14F215.63
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.63
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.75
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G522.29
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G532.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G531.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.90
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.03
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.66
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G523.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G525.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.00
whole body, embryo E17.5.CNhs10513.490-9F928.36
whole body, embryo E17.CNhs10517.475-3I527.98
whole body, embryo E18.CNhs10516.493-3B324.80
whole body, neonate N00.CNhs10525.657-19C231.37
whole body, neonate N01.CNhs10576.659-23C618.36
whole body, neonate N06.CNhs10515.692-21D128.46
whole body, neonate N10.CNhs10518.761-6B422.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.63e-1233
neuronal stem cell1.63e-1233
neuroblast1.63e-1233
electrically signaling cell1.63e-1233
ectodermal cell8.78e-1244
neurectodermal cell8.78e-1244
neural cell2.83e-1143
CNS neuron (sensu Vertebrata)1.70e-1023
neuroblast (sensu Vertebrata)1.70e-1023
electrically responsive cell7.45e-1039
electrically active cell7.45e-1039

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.79e-2595
ectoderm2.79e-2595
presumptive ectoderm2.79e-2595
nervous system1.53e-2175
ecto-epithelium3.85e-2173
central nervous system1.65e-2073
neurectoderm2.27e-1964
neural plate2.27e-1964
presumptive neural plate2.27e-1964
regional part of nervous system5.01e-1754
gray matter1.55e-1634
neural tube8.76e-1652
neural rod8.76e-1652
future spinal cord8.76e-1652
neural keel8.76e-1652
pre-chordal neural plate1.07e-1449
brain grey matter1.59e-1429
regional part of telencephalon1.59e-1429
telencephalon1.59e-1429
brain1.53e-1347
future brain1.53e-1347
regional part of brain3.59e-1346
anterior neural tube3.52e-1240
structure with developmental contribution from neural crest7.09e-1292
regional part of forebrain9.70e-1239
forebrain9.70e-1239
future forebrain9.70e-1239
cerebral cortex3.16e-1121
cerebral hemisphere3.16e-1121
pallium3.16e-1121
regional part of cerebral cortex2.35e-0917
anatomical conduit4.04e-09122
tube5.03e-09114
occipital lobe4.95e-0710
visual cortex4.95e-0710
neocortex4.95e-0710
epithelium5.26e-07174
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