FFCP PHASE1:Mm9::chr15:83000598..83000616,-: Difference between revisions
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{{FFCP|EntrezGene=109754|HGNC=|MCL_coexpression_id=94|UniProt=F2Z3V0|association_with_transcript=0bp_to_ENSMUST00000162834_5end|description=CAGE_peak_4_at_Cyb5r3_5end|id=chr15:83000598..83000616,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!1.53e-10!85;UBERON:0003914!1.98e-09!47;UBERON:0009569!2.28e-09!66;UBERON:0002100!2.87e-09!98;UBERON:0002365!2.02e-08!25;UBERON:0002330!2.02e-08!25;UBERON:0002107!2.80e-07!22;UBERON:0007499!2.80e-07!22;UBERON:0006925!2.80e-07!22;UBERON:0009497!2.80e-07!22;UBERON:0000015!2.80e-07!22;UBERON:0002423!2.80e-07!22;UBERON:0006235!2.80e-07!22;UBERON:0008835!2.80e-07!22;UBERON:0003894!2.80e-07!22;UBERON:0004161!2.80e-07!22;UBERON:0008836!2.80e-07!22;UBERON:0005172!3.05e-07!49;UBERON:0005173!3.05e-07!49;UBERON:0002417!3.05e-07!49;UBERON:0000916!3.05e-07!49;UBERON:0009854!3.55e-07!23;UBERON:0009856!3.55e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.25e-11,79;UBERON:0002100,9.73e-11,90;UBERON:0003914,1.17e-09,47;UBERON:0009569,2.40e-09,66;UBERON:0002365,6.19e-09,25;UBERON:0002330,6.19e-09,25;UBERON:0003104,9.56e-09,61;UBERON:0009142,9.56e-09,61;UBERON:0005256,7.06e-08,45;UBERON:0002107,1.08e-07,22;UBERON:0007499,1.08e-07,22;UBERON:0006925,1.08e-07,22;UBERON:0009497,1.08e-07,22;UBERON:0000015,1.08e-07,22;UBERON:0002423,1.08e-07,22;UBERON:0006235,1.08e-07,22;UBERON:0008835,1.08e-07,22;UBERON:0003894,1.08e-07,22;UBERON:0004161,1.08e-07,22;UBERON:0008836,1.08e-07,22;UBERON:0009854,1.38e-07,23;UBERON:0009856,1.38e-07,23;UBERON:0005172,6.22e-07,49;UBERON:0005173,6.22e-07,49;UBERON:0002417,6.22e-07,49;UBERON:0000916,6.22e-07,49|phase1_expression=0.640595388419176,1.04692622291808,4.09499315450582,0.90739263392049,1.50268718983904,0.33575854382378,1.16806320297763,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,11.9060606211498,0,0,2.3998863419011,2.06468352960453,1.72269589234506,2.58457197695445,1.50829862880122,0,0,0,1.90509202037889,1.23012957516914,0,0,0.498703936075477,0,0,0,0,0,0,0,1.00717454380462,1.52065396829272,1.65192076945513,0,1.30815093828268,2.19686182734472,1.36100929351998,1.1198913730029,1.43752564364972,0,0,0.336093799142464,4.63066984864705,2.0057340795713,9.28209766099396,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0.207379224616955,0.135005938331691,0.210324961351382,0.856952953211411,0.662605622854841,0.122490799214954,0.191690942036473,0,1.10115880999389,1.53224805702225,0.921639199537461,0.131886287730194,0.640413505216868,0,1.67509799400829,0,1.37518422999129,0.883885756421003,0.996601765593721,0.745597783301202,0.454357159999104,0.529000920747499,53.6249304098104,29.2544118173671,29.918738683141,40.4777393728363,9.74664626171504,33.1539896452028,12.4995533917259,0.170430322578058,0.259786004602869,0,0.845060518660083,0,0,0,0.216491041011214,0.253359865475099,0,15.8715592809493,3.36619248741323,6.82833839698194,0.693941307064543,2.43572382649713,2.7673859670727,3.91878865436819,4.8211369925639,7.1629957057915,4.20231445148436,13.013942122792,3.5384422077995,3.23533699894818,8.39197770149496,5.81850303762267,1.86391761218122,1.75668478206928,1.46612694769419,7.66371165625774,0,0,0,1.64769703345305,1.37250180845588,0.502617408451458,2.08589184230732,1.79000820131231,0.83115217823824,1.94689515681309,1.12023300235348,2.86136032403214,2.52722758433675,25.0425808504904,0.130120442962704,0.229902104433473,0.720248519221397,0.60281927134286,1.76894897793452,1.7935920839879,1.21812241927647,5.43277078551933,0,0.567318240503458,0.351902248327898,0.876782929710299,0,2.089512999133,2.46938563689532,0.796137067273973,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,1.89395788468168,2.16440654922144,1.23413690309903,1.62773761325285,3.21928081679543,4.32031766758527,3.29119699826961,11.4917224855367,25.6988126260363,20.0293982772705,14.2707574939183,28.5859671959592,0.420579897128254,1.23485534855141,28.4160153366066,2.11560453330835,0.213288250535234,0,0.515469845288373,0.403367049246685,1.11189021922435,1.14135375667535,1.89811624617805,2.47048432086016,0.251335208800269,1.59165177632921,1.9496408711912,3.59527763461689,2.16138049874694,3.98282546508734,0.758671603812327,0.456994050438915,2.25415471346161,1.4255592949172,1.93952487167626,2.31448205638051,4.3000845244495,8.41377843483732,6.90794402502049,7.65062416315163,24.9020206753205,0.166845105716094,0.196558995113203,0.449724224769707,1.42002084971952,2.17059443777175,4.07401362850272,8.91858026097513,4.21551589615092,8.23684239564244,7.18841032636773,8.93138274404408,10.2972432127805,20.4588891137161,20.0925103144542,26.5343936749852,79.44387177164,0,0.162964976442026,0.678980343100753,2.34690248288502,9.04533790185805,38.8011134644202,23.4160377429359,23.4876364718225,24.3611158613652,36.5151420225645,59.4823832418129,49.9059597592438,79.5569822198314,0,0,21.6376280128376,6.62248191131358,3.53211297973142,3.5163505977661,0,16.4106102682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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109754 | |||
|HGNC= | |||
|MCL_coexpression_id=94 | |||
|TSSclassifier=NA | |||
|UniProt=F2Z3V0 | |||
|association_with_transcript=0bp_to_ENSMUST00000162834_5end | |||
|cluster_id=chr15:83000598..83000616,- | |||
|description=CAGE_peak_4_at_Cyb5r3_5end | |||
|id=chr15:83000598..83000616,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!1.53e-10!85;UBERON:0003914!1.98e-09!47;UBERON:0009569!2.28e-09!66;UBERON:0002100!2.87e-09!98;UBERON:0002365!2.02e-08!25;UBERON:0002330!2.02e-08!25;UBERON:0002107!2.80e-07!22;UBERON:0007499!2.80e-07!22;UBERON:0006925!2.80e-07!22;UBERON:0009497!2.80e-07!22;UBERON:0000015!2.80e-07!22;UBERON:0002423!2.80e-07!22;UBERON:0006235!2.80e-07!22;UBERON:0008835!2.80e-07!22;UBERON:0003894!2.80e-07!22;UBERON:0004161!2.80e-07!22;UBERON:0008836!2.80e-07!22;UBERON:0005172!3.05e-07!49;UBERON:0005173!3.05e-07!49;UBERON:0002417!3.05e-07!49;UBERON:0000916!3.05e-07!49;UBERON:0009854!3.55e-07!23;UBERON:0009856!3.55e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.25e-11,79;UBERON:0002100,9.73e-11,90;UBERON:0003914,1.17e-09,47;UBERON:0009569,2.40e-09,66;UBERON:0002365,6.19e-09,25;UBERON:0002330,6.19e-09,25;UBERON:0003104,9.56e-09,61;UBERON:0009142,9.56e-09,61;UBERON:0005256,7.06e-08,45;UBERON:0002107,1.08e-07,22;UBERON:0007499,1.08e-07,22;UBERON:0006925,1.08e-07,22;UBERON:0009497,1.08e-07,22;UBERON:0000015,1.08e-07,22;UBERON:0002423,1.08e-07,22;UBERON:0006235,1.08e-07,22;UBERON:0008835,1.08e-07,22;UBERON:0003894,1.08e-07,22;UBERON:0004161,1.08e-07,22;UBERON:0008836,1.08e-07,22;UBERON:0009854,1.38e-07,23;UBERON:0009856,1.38e-07,23;UBERON:0005172,6.22e-07,49;UBERON:0005173,6.22e-07,49;UBERON:0002417,6.22e-07,49;UBERON:0000916,6.22e-07,49 | |||
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| |||
|short_description=p4@Cyb5r3 | |||
}} |
Latest revision as of 05:23, 27 September 2015
Short description: | p4@Cyb5r3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cyb5r3_5end |
Coexpression cluster: | MCL_coexpression_mm9:94 |
Association with transcript: | 0bp_to_ENSMUST00000162834_5end |
EntrezGene: | Cyb5r3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 2.25e-11 | 79 |
trunk | 9.73e-11 | 90 |
epithelial tube | 1.17e-09 | 47 |
subdivision of trunk | 2.40e-09 | 66 |
exocrine gland | 6.19e-09 | 25 |
exocrine system | 6.19e-09 | 25 |
mesenchyme | 9.56e-09 | 61 |
entire embryonic mesenchyme | 9.56e-09 | 61 |
trunk mesenchyme | 7.06e-08 | 45 |
liver | 1.08e-07 | 22 |
epithelial sac | 1.08e-07 | 22 |
digestive gland | 1.08e-07 | 22 |
epithelium of foregut-midgut junction | 1.08e-07 | 22 |
anatomical boundary | 1.08e-07 | 22 |
hepatobiliary system | 1.08e-07 | 22 |
foregut-midgut junction | 1.08e-07 | 22 |
hepatic diverticulum | 1.08e-07 | 22 |
liver primordium | 1.08e-07 | 22 |
septum transversum | 1.08e-07 | 22 |
liver bud | 1.08e-07 | 22 |
digestive tract diverticulum | 1.38e-07 | 23 |
sac | 1.38e-07 | 23 |
abdomen element | 6.22e-07 | 49 |
abdominal segment element | 6.22e-07 | 49 |
abdominal segment of trunk | 6.22e-07 | 49 |
abdomen | 6.22e-07 | 49 |