Personal tools

FFCP PHASE1:Mm9::chr7:96781009..96781052,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr7:96781009..96781052,+ |short_description=p4@Me3 |description=CAGE_peak_4_at_Me3_5end |association_with_transcript=0bp_to_ENSMUST00000162145,uc009igc.1_5end ...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:96781009..96781052,+
|DHSsupport=NA
|short_description=p4@Me3
|DPIdataset=NA
|description=CAGE_peak_4_at_Me3_5end
|association_with_transcript=0bp_to_ENSMUST00000162145,uc009igc.1_5end
|EntrezGene=109264
|EntrezGene=109264
|HGNC=
|HGNC=
|MCL_coexpression_id=311
|TSSclassifier=NA
|UniProt=Q3UZW5
|UniProt=Q3UZW5
|association_with_transcript=0bp_to_ENSMUST00000162145,uc009igc.1_5end
|cluster_id=chr7:96781009..96781052,+
|description=CAGE_peak_4_at_Me3_5end
|id=chr7:96781009..96781052,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!8.49e-12!63;UBERON:0001049!1.76e-09!52;UBERON:0005068!1.76e-09!52;UBERON:0006241!1.76e-09!52;UBERON:0007135!1.76e-09!52;UBERON:0000955!3.08e-09!50;UBERON:0006238!3.08e-09!50;UBERON:0003103!6.38e-09!43;UBERON:0001017!7.69e-09!73;UBERON:0005743!7.69e-09!73;UBERON:0004121!8.17e-09!102;UBERON:0000924!8.17e-09!102;UBERON:0006601!8.17e-09!102;UBERON:0002616!9.11e-09!49;UBERON:0000073!2.09e-08!75;UBERON:0001016!2.09e-08!75;UBERON:0002020!1.69e-07!34;UBERON:0002346!2.14e-07!71;UBERON:0003075!2.14e-07!71;UBERON:0007284!2.14e-07!71;UBERON:0004111!3.59e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.16e-15,92;UBERON:0000073,3.80e-14,54;UBERON:0001049,1.25e-12,52;UBERON:0005068,1.25e-12,52;UBERON:0006241,1.25e-12,52;UBERON:0007135,1.25e-12,52;UBERON:0002346,1.15e-11,64;UBERON:0003075,1.15e-11,64;UBERON:0007284,1.15e-11,64;UBERON:0001017,1.39e-11,73;UBERON:0001016,6.52e-11,75;UBERON:0004121,8.91e-11,95;UBERON:0000924,8.91e-11,95;UBERON:0006601,8.91e-11,95;UBERON:0000955,1.31e-10,47;UBERON:0006238,1.31e-10,47;UBERON:0002616,5.74e-10,46;UBERON:0010371,6.17e-10,73;UBERON:0002021,5.78e-09,10;UBERON:0000411,5.78e-09,10;UBERON:0001950,5.78e-09,10;UBERON:0002020,8.23e-09,34;UBERON:0004111,2.60e-08,122;UBERON:0003056,1.67e-07,49;UBERON:0003076,1.73e-07,12;UBERON:0003057,1.73e-07,12;UBERON:0003103,2.30e-07,43;UBERON:0002619,2.92e-07,17;UBERON:0003080,3.81e-07,40;UBERON:0000025,3.89e-07,114;UBERON:0003528,6.61e-07,29;UBERON:0002791,6.61e-07,29;UBERON:0001893,6.61e-07,29
|phase1_expression=1.12104192973356,0,0,0,1.00179145989269,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0.47997726838022,0.91763712426868,0,0.430761996159075,0.430942465371778,2.85035129184561,0.504060259519861,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0.101376931219515,0,0,4.57852828398938,4.39372365468944,4.27745777963423,0.979904951377538,2.87505128729943,0,0,0,0.514518872071894,0.85960031981627,2.06268836910977,1.01158230429799,0,1.90149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,4.85606673486466,4.8591079009355,0.367472397644862,0,0,8.8092704799511,7.53355294702608,6.75868746327471,0.923204014111357,0.823388792421687,0.52091337055676,12.2840519560608,6.19038871034848,6.57032465440283,5.59794312399969,5.69486723196412,0.559198337475902,0.075726193333184,0.0755715601067855,2.02905142091174,0,0,0,0,0,5.61777680527007,0.340860645156116,0,0,1.83096445709685,0,0,0,0,0.253359865475099,0,1.25602267690966,0.258937883647172,0,0,0,0.230615497256059,0,0.23517741427141,1.0053327306374,0.247194967734374,6.65157041831594,0.884610551949874,2.10296904931632,4.63767188766826,0.969750506270444,1.86391761218122,16.1029438356351,14.2423760633149,0,0,0,0,7.78911324905078,4.57500602818627,0.502617408451458,7.12679712788333,4.09144731728529,7.68815764870372,5.353961681236,0.81471491080253,1.61729061793121,0.252722758433675,1.26265113531884,0.260240885925407,0.919608417733892,0.180062129805349,0.30140963567143,1.76894897793452,1.92170580427275,1.87403449119458,1.81092359517311,0,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0.703578179943289,0.540186184383045,0.946978942340841,0.983821158737019,2.00547246753592,2.09280550275367,4.29237442239391,3.15266424391358,6.25327429671226,16.2525789438304,22.6181978632937,20.9065982018225,18.2226595691572,20.8019949078576,3.57492912559016,0.308713837137853,0,0.264450566663544,0,0,0.38660238396628,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0.658795818896044,1.00534083520108,0.397912944082302,0.974820435595601,0,0.648414149624083,0,0.189667900953082,0.456994050438915,1.1270773567308,2.03651327845314,0.969762435838129,2.94570443539338,4.93244989569207,4.13308414342886,4.08196692387575,4.68909222902842,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.538192240565737,0,1.10851914099963,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.670025029767263,0.238043640886014,0,0.630540576424764,0.44292937929755,0.478364305972461,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0.551873492609465,9.79358598925531,7.2671245687166,0,16.4106102682842,0.315508219416257,0,0,0,0,0,0.404810701674894,0.292255857911312,0,6.42642632843614,1.41940085208269,0.35613120733451,0.651547837414304,1.15479086080775,1.32745138339963,1.94224508923985,1.51161778482376,2.07465587731488,2.36241514304618,1.22974059177571,0.516856586336442,3.27180356529755,2.85197902707777,3.47640433729398,0,1.03135543248187,3.74483566329167,0,0.258717367565509,0,0,0.178368817602071,0.164549020602121,1.2178597964584,0,0,1.10264199027481,0.8244312647074,0.807322133479528,0.120625849856312,0.119372344003136,0.492422699235184,0.874442509889552,6.30446026835733,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.609958401380546,0.216010681643603,0.209088296014469,0.218362563746178,0.944050424693745,1.57041565878138,1.04702376793612,0,8.69875038321696,0,0,0,0,0,0,0,0.13020438484395,0,0,0.576060012515731,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0.116876902181569,13.3770926332975,0,0,0,0.965947970160952,1.12609485270709,1.28206136987086,0.214368379079066,0,1.6942555278512,3.68260189205742,5.15605962095457,3.95262319390481,9.59115527678899,5.2877572817279,8.10027000278167,10.3573876741571,6.79713613476307,8.80192529978094,0.103787347584177,0,0,0.972426868273176,0,0.551530525350042,0,2.06035057238894,0.64183841918363,1.01078884705519,1.77435509923168,0.754505365544305,0.468207537349412,0.832326981263301,0.689225627467359,1.90517476513229,1.0429589335037,1.15745532278223,0.824171801606613,0.588795680537589,0.685738504770831,0.70990322463735,0.476872379894642,1.16277133305863,0.941093804153306,1.01537529470012,1.46342378298218,0.263069711437843,0.950628796921032,0.561142271657738,0.593175090620871,0.29551344712669,0.409231043169689,1.08455788830176,0.964533054905707,0.999242311751784,0.935726433781634,1.28922632428979,3.25190164517034,3.52946270591225,6.02856372613096
|phase1_expression=1.12104192973356,0,0,0,1.00179145989269,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0.47997726838022,0.91763712426868,0,0.430761996159075,0.430942465371778,2.85035129184561,0.504060259519861,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0.101376931219515,0,0,4.57852828398938,4.39372365468944,4.27745777963423,0.979904951377538,2.87505128729943,0,0,0,0.514518872071894,0.85960031981627,2.06268836910977,1.01158230429799,0,1.90149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,4.85606673486466,4.8591079009355,0.367472397644862,0,0,8.8092704799511,7.53355294702608,6.75868746327471,0.923204014111357,0.823388792421687,0.52091337055676,12.2840519560608,6.19038871034848,6.57032465440283,5.59794312399969,5.69486723196412,0.559198337475902,0.075726193333184,0.0755715601067855,2.02905142091174,0,0,0,0,0,5.61777680527007,0.340860645156116,0,0,1.83096445709685,0,0,0,0,0.253359865475099,0,1.25602267690966,0.258937883647172,0,0,0,0.230615497256059,0,0.23517741427141,1.0053327306374,0.247194967734374,6.65157041831594,0.884610551949874,2.10296904931632,4.63767188766826,0.969750506270444,1.86391761218122,16.1029438356351,14.2423760633149,0,0,0,0,7.78911324905078,4.57500602818627,0.502617408451458,7.12679712788333,4.09144731728529,7.68815764870372,5.353961681236,0.81471491080253,1.61729061793121,0.252722758433675,1.26265113531884,0.260240885925407,0.919608417733892,0.180062129805349,0.30140963567143,1.76894897793452,1.92170580427275,1.87403449119458,1.81092359517311,0,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0.703578179943289,0.540186184383045,0.946978942340841,0.983821158737019,2.00547246753592,2.09280550275367,4.29237442239391,3.15266424391358,6.25327429671226,16.2525789438304,22.6181978632937,20.9065982018225,18.2226595691572,20.8019949078576,3.57492912559016,0.308713837137853,0,0.264450566663544,0,0,0.38660238396628,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0.658795818896044,1.00534083520108,0.397912944082302,0.974820435595601,0,0.648414149624083,0,0.189667900953082,0.456994050438915,1.1270773567308,2.03651327845314,0.969762435838129,2.94570443539338,4.93244989569207,4.13308414342886,4.08196692387575,4.68909222902842,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.538192240565737,0,1.10851914099963,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.670025029767263,0.238043640886014,0,0.630540576424764,0.44292937929755,0.478364305972461,0.491589944147214,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0.551873492609465,9.79358598925531,7.2671245687166,0,16.4106102682842,0.315508219416257,0,0,0,0,0,0.404810701674894,0.292255857911312,0,6.42642632843614,1.41940085208269,0.35613120733451,0.651547837414304,1.15479086080775,1.32745138339963,1.94224508923985,1.51161778482376,2.07465587731488,2.36241514304618,1.22974059177571,0.516856586336442,3.27180356529755,2.85197902707777,3.47640433729398,0,1.03135543248187,3.74483566329167,0,0.258717367565509,0,0,0.178368817602071,0.164549020602121,1.2178597964584,0,0,1.10264199027481,0.8244312647074,0.807322133479528,0.120625849856312,0.119372344003136,0.492422699235184,0.874442509889552,6.30446026835733,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.609958401380546,0.216010681643603,0.209088296014469,0.218362563746178,0.944050424693745,1.57041565878138,1.04702376793612,0,8.69875038321696,0,0,0,0,0,0,0,0.13020438484395,0,0,0.576060012515731,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0.116876902181569,13.3770926332975,0,0,0,0.965947970160952,1.12609485270709,1.28206136987086,0.214368379079066,0,1.6942555278512,3.68260189205742,5.15605962095457,3.95262319390481,9.59115527678899,5.2877572817279,8.10027000278167,10.3573876741571,6.79713613476307,8.80192529978094,0.103787347584177,0,0,0.972426868273176,0,0.551530525350042,0,2.06035057238894,0.64183841918363,1.01078884705519,1.77435509923168,0.754505365544305,0.468207537349412,0.832326981263301,0.689225627467359,1.90517476513229,1.0429589335037,1.15745532278223,0.824171801606613,0.588795680537589,0.685738504770831,0.70990322463735,0.476872379894642,1.16277133305863,0.941093804153306,1.01537529470012,1.46342378298218,0.263069711437843,0.950628796921032,0.561142271657738,0.593175090620871,0.29551344712669,0.409231043169689,1.08455788830176,0.964533054905707,0.999242311751784,0.935726433781634,1.28922632428979,3.25190164517034,3.52946270591225,6.02856372613096
|short_description=p4@Me3
}}
}}

Latest revision as of 05:23, 27 September 2015

Short description:p4@Me3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Me3_5end
Coexpression cluster:MCL_coexpression_mm9:311
Association with transcript: 0bp_to_ENSMUST00000162145, uc009igc.1_5end
EntrezGene:Me3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Me3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B216.10
cerebellum, neonate N30.CNhs11135.1395-42I214.24
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E33.15
heart, neonate N03.CNhs11221.1349-25I26.25
heart, neonate N10.CNhs11118.749-24G116.25
heart, neonate N16.CNhs11209.782-15G122.62
heart, neonate N20.CNhs11127.821-26I620.91
heart, neonate N25.CNhs11196.1351-25D318.22
heart, neonate N30.CNhs11202.1390-42D220.80
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G72.95
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H14.69
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C29.79
medulla oblongata, neonate N30.CNhs11200.1396-42A37.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.41
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B413.38
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B46.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest2.16e-1592
regional part of nervous system3.80e-1454
neural tube1.25e-1252
neural rod1.25e-1252
future spinal cord1.25e-1252
neural keel1.25e-1252
neurectoderm1.15e-1164
neural plate1.15e-1164
presumptive neural plate1.15e-1164
central nervous system1.39e-1173
nervous system6.52e-1175
ectoderm-derived structure8.91e-1195
ectoderm8.91e-1195
presumptive ectoderm8.91e-1195
brain1.31e-1047
future brain1.31e-1047
regional part of brain5.74e-1046
ecto-epithelium6.17e-1073
occipital lobe5.78e-0910
visual cortex5.78e-0910
neocortex5.78e-0910
gray matter8.23e-0934
anatomical conduit2.60e-08122
pre-chordal neural plate1.67e-0749
posterior neural tube1.73e-0712
chordal neural plate1.73e-0712
compound organ2.30e-0743
regional part of cerebral cortex2.92e-0717
anterior neural tube3.81e-0740
tube3.89e-07114
brain grey matter6.61e-0729
regional part of telencephalon6.61e-0729
telencephalon6.61e-0729
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:96781009..96781052,%2B&oldid=4294680"