Personal tools

FFCP PHASE1:Mm9::chr4:77857731..77857793,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19266
|EntrezGene=19266
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000129550,ENSMUST00000134604,ENSMUST00000156656_5end
|association_with_transcript=0bp_to_ENSMUST00000129550,ENSMUST00000134604,ENSMUST00000156656_5end
|cluster_id=chr4:77857731..77857793,-
|description=CAGE_peak_2_at_Ptprd_5end
|description=CAGE_peak_2_at_Ptprd_5end
|id=chr4:77857731..77857793,-
|id=chr4:77857731..77857793,-
|ontology_enrichment_celltype=CL:0000540!1.42e-15!33;CL:0000047!1.42e-15!33;CL:0000031!1.42e-15!33;CL:0000404!1.42e-15!33;CL:0000117!4.55e-15!23;CL:0000337!4.55e-15!23;CL:0000393!5.94e-11!39;CL:0000211!5.94e-11!39;CL:0000221!6.82e-10!44;CL:0000133!6.82e-10!44;CL:0002319!1.23e-09!43
|ontology_enrichment_celltype=CL:0000540!1.42e-15!33;CL:0000047!1.42e-15!33;CL:0000031!1.42e-15!33;CL:0000404!1.42e-15!33;CL:0000117!4.55e-15!23;CL:0000337!4.55e-15!23;CL:0000393!5.94e-11!39;CL:0000211!5.94e-11!39;CL:0000221!6.82e-10!44;CL:0000133!6.82e-10!44;CL:0002319!1.23e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.62e-20,23;CL:0000337,2.62e-20,23;CL:0000540,1.81e-13,33;CL:0000047,1.81e-13,33;CL:0000031,1.81e-13,33;CL:0000404,1.81e-13,33;CL:0000393,4.08e-10,39;CL:0000211,4.08e-10,39;CL:0000221,9.18e-09,44;CL:0000133,9.18e-09,44;CL:0002319,1.91e-08,43;CL:0002609,5.47e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.14e-28!73;UBERON:0005743!4.14e-28!73;UBERON:0002346!6.51e-28!71;UBERON:0003075!6.51e-28!71;UBERON:0007284!6.51e-28!71;UBERON:0000073!7.20e-28!75;UBERON:0001016!7.20e-28!75;UBERON:0000033!2.22e-25!63;UBERON:0001049!2.38e-25!52;UBERON:0005068!2.38e-25!52;UBERON:0006241!2.38e-25!52;UBERON:0007135!2.38e-25!52;UBERON:0004121!2.59e-25!102;UBERON:0000924!2.59e-25!102;UBERON:0006601!2.59e-25!102;UBERON:0000955!1.71e-24!50;UBERON:0006238!1.71e-24!50;UBERON:0003056!5.33e-24!49;UBERON:0002616!9.40e-24!49;UBERON:0003080!4.53e-22!40;UBERON:0002780!2.60e-21!39;UBERON:0001890!2.60e-21!39;UBERON:0006240!2.60e-21!39;UBERON:0002020!1.52e-20!34;UBERON:0002791!1.11e-17!29;UBERON:0003528!1.11e-17!29;UBERON:0001893!1.11e-17!29;UBERON:0007811!5.22e-13!86;UBERON:0000956!9.73e-13!21;UBERON:0001869!9.73e-13!21;UBERON:0000203!9.73e-13!21;UBERON:0000153!3.67e-12!94;UBERON:0002619!6.92e-10!17;UBERON:0002021!2.25e-09!10;UBERON:0000411!2.25e-09!10;UBERON:0001950!2.25e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.06e-35,54;UBERON:0002346,3.02e-34,64;UBERON:0003075,3.02e-34,64;UBERON:0007284,3.02e-34,64;UBERON:0001049,4.61e-33,52;UBERON:0005068,4.61e-33,52;UBERON:0006241,4.61e-33,52;UBERON:0007135,4.61e-33,52;UBERON:0003056,6.07e-31,49;UBERON:0001017,1.77e-30,73;UBERON:0001016,3.81e-29,75;UBERON:0000955,5.65e-29,47;UBERON:0006238,5.65e-29,47;UBERON:0003080,8.15e-29,40;UBERON:0010371,9.31e-29,73;UBERON:0002020,1.11e-28,34;UBERON:0002616,5.58e-28,46;UBERON:0002780,9.08e-28,39;UBERON:0001890,9.08e-28,39;UBERON:0006240,9.08e-28,39;UBERON:0004121,3.93e-27,95;UBERON:0000924,3.93e-27,95;UBERON:0006601,3.93e-27,95;UBERON:0003528,1.07e-24,29;UBERON:0002791,1.07e-24,29;UBERON:0001893,1.07e-24,29;UBERON:0010314,1.36e-20,92;UBERON:0000956,8.42e-18,21;UBERON:0001869,8.42e-18,21;UBERON:0000203,8.42e-18,21;UBERON:0002619,8.19e-14,17;UBERON:0002021,2.10e-12,10;UBERON:0000411,2.10e-12,10;UBERON:0001950,2.10e-12,10;UBERON:0002420,5.64e-08,8;UBERON:0007245,5.64e-08,8;UBERON:0010009,5.64e-08,8;UBERON:0010011,5.64e-08,8;UBERON:0000454,5.64e-08,8;UBERON:0000025,7.47e-07,114
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50432901510698,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1158230429799,8.46385566835253,10.775133859605,0.338844532069132,0,0,0,0,0,0,34.3212616741061,22.8160035780557,32.3900440481128,7.42692559449889,6.84692476950002,18.2511290830282,14.185129710699,20.2228133054205,12.1127469099328,26.558966321719,19.6616362567992,11.6059933202571,13.174220678747,9.37644067002168,13.1216009530649,21.3849791812038,19.2525792198781,10.3120004915784,12.2439645487229,14.1663578827228,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,1.69012103732017,0,0,0,0,0,0,0.45673551887624,0,2.07818994690755,0.346970653532272,0,0.461230994512117,0.301445281105245,0.470354828542819,1.25666591329675,0,0,0,0.161766849947409,0,0,0,1.17112318804619,0.41889341362691,0,0,0,0,31.1564529962031,26.0775343606617,11.6858547464964,71.4417955990256,71.3446125951622,15.7918913865266,32.6104938766193,0,0,0,1.26265113531884,0.130120442962704,1.60931473103431,1.62055916824814,3.61691562805716,2.51735046859913,2.17793324484245,2.52994656311268,3.62184719034622,0,0.189106080167819,0.175951124163949,0.657587197282725,0,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1878350621562,6.5858951922742,0,0.264450566663544,0.213288250535234,0.928946687441754,0.128867461322093,0,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9816660786327,17.1129062424617,0,0,0.315508219416257,0.390438744296638,1.07711698866399,0.955875191810208,0.445597348164788,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,20.5645642509957,0,0,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0,0,0,0,48.3424240170379,1.26042765821917,0.388076051348264,1.71469628025274,5.49754724291048,6.0645397984704,5.10101963866575,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,13.1651964427462,0,0.619160603889667,0,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.432021363287205,0.418176592028937,0.655087691238533,0.539457385539283,0.41326727862668,0.26175594198403,0,0,0,0.299033092087958,0.496375471371293,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,100.525827985838,84.6998435173205,79.6324763680761,82.48952752497,106.18779056445,120.107629684962,89.7779925308302,97.7197010996558,109.660462974178,133.58216043197,0,2.39414924040619,3.41467211508268,2.43106717068294,0.838452650511929,1.47074806760011,6.66740183404846,5.76898160268904,6.09746498224449,4.80124702351215,5.57654459758527,5.84741658296836,4.96299989590377,6.85069130732101,5.22662767496081,5.71552429539688,6.14186927507734,5.40145817298374,3.70877310722976,5.15196220470391,3.08582327146874,3.72699192934609,5.48403236878838,4.21504608233753,4.51725025993587,4.39995961036718,4.57319932181931,2.63069711437843,5.97538100921792,6.73370725989286,6.8808310512021,6.79680928391388,5.72923460437565,5.26785260032284,3.47231899766054,6.74488560432454,4.67863216890817,2.57845264857958,0.191288332068843,0.441182838239031,0.463735671240843
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50432901510698,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1158230429799,8.46385566835253,10.775133859605,0.338844532069132,0,0,0,0,0,0,34.3212616741061,22.8160035780557,32.3900440481128,7.42692559449889,6.84692476950002,18.2511290830282,14.185129710699,20.2228133054205,12.1127469099328,26.558966321719,19.6616362567992,11.6059933202571,13.174220678747,9.37644067002168,13.1216009530649,21.3849791812038,19.2525792198781,10.3120004915784,12.2439645487229,14.1663578827228,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,1.69012103732017,0,0,0,0,0,0,0.45673551887624,0,2.07818994690755,0.346970653532272,0,0.461230994512117,0.301445281105245,0.470354828542819,1.25666591329675,0,0,0,0.161766849947409,0,0,0,1.17112318804619,0.41889341362691,0,0,0,0,31.1564529962031,26.0775343606617,11.6858547464964,71.4417955990256,71.3446125951622,15.7918913865266,32.6104938766193,0,0,0,1.26265113531884,0.130120442962704,1.60931473103431,1.62055916824814,3.61691562805716,2.51735046859913,2.17793324484245,2.52994656311268,3.62184719034622,0,0.189106080167819,0.175951124163949,0.657587197282725,0,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1878350621562,6.5858951922742,0,0.264450566663544,0.213288250535234,0.928946687441754,0.128867461322093,0,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9816660786327,17.1129062424617,0,0,0.315508219416257,0.390438744296638,1.07711698866399,0.955875191810208,0.445597348164788,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,20.5645642509957,0,0,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0,0.258428293168221,0.727067458955011,0,0,0,0,48.3424240170379,1.26042765821917,0.388076051348264,1.71469628025274,5.49754724291048,6.0645397984704,5.10101963866575,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,13.1651964427462,0,0.619160603889667,0,0,0,0,0,0,0,0,0.790839983952838,0.406638934253697,0.432021363287205,0.418176592028937,0.655087691238533,0.539457385539283,0.41326727862668,0.26175594198403,0,0,0,0.299033092087958,0.496375471371293,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,0.39061315453185,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,100.525827985838,84.6998435173205,79.6324763680761,82.48952752497,106.18779056445,120.107629684962,89.7779925308302,97.7197010996558,109.660462974178,133.58216043197,0,2.39414924040619,3.41467211508268,2.43106717068294,0.838452650511929,1.47074806760011,6.66740183404846,5.76898160268904,6.09746498224449,4.80124702351215,5.57654459758527,5.84741658296836,4.96299989590377,6.85069130732101,5.22662767496081,5.71552429539688,6.14186927507734,5.40145817298374,3.70877310722976,5.15196220470391,3.08582327146874,3.72699192934609,5.48403236878838,4.21504608233753,4.51725025993587,4.39995961036718,4.57319932181931,2.63069711437843,5.97538100921792,6.73370725989286,6.8808310512021,6.79680928391388,5.72923460437565,5.26785260032284,3.47231899766054,6.74488560432454,4.67863216890817,2.57845264857958,0.191288332068843,0.441182838239031,0.463735671240843
|short_description=p2@Ptprd
|short_description=p2@Ptprd
}}
}}

Latest revision as of 05:29, 27 September 2015

Short description:p2@Ptprd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ptprd_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000129550, ENSMUST00000134604, ENSMUST00000156656_5end
EntrezGene:Ptprd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ptprd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.12
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.82
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D932.39
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.17
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A431.16
corpus striatum, adult.CNhs10487.19-21D826.08
corpus striatum, neonate N00.CNhs11226.630-43F111.69
cortex, adult.CNhs10473.12-14D571.44
cortex, neonate N30.CNhs11107.1392-42F271.34
diencephalon, adult.CNhs10482.20-12F215.79
diencephalon, neonate N30.CNhs11201.1388-42B232.61
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E820.19
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C217.98
medulla oblongata, neonate N30.CNhs11200.1396-42A317.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I920.56
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G848.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1100.53
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A284.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A379.63
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D782.49
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4106.19
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5120.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A689.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A797.72
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8109.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9133.58
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.06e-3554
neurectoderm3.02e-3464
neural plate3.02e-3464
presumptive neural plate3.02e-3464
neural tube4.61e-3352
neural rod4.61e-3352
future spinal cord4.61e-3352
neural keel4.61e-3352
pre-chordal neural plate6.07e-3149
central nervous system1.77e-3073
nervous system3.81e-2975
brain5.65e-2947
future brain5.65e-2947
anterior neural tube8.15e-2940
ecto-epithelium9.31e-2973
gray matter1.11e-2834
regional part of brain5.58e-2846
regional part of forebrain9.08e-2839
forebrain9.08e-2839
future forebrain9.08e-2839
ectoderm-derived structure3.93e-2795
ectoderm3.93e-2795
presumptive ectoderm3.93e-2795
brain grey matter1.07e-2429
regional part of telencephalon1.07e-2429
telencephalon1.07e-2429
structure with developmental contribution from neural crest1.36e-2092
cerebral cortex8.42e-1821
cerebral hemisphere8.42e-1821
pallium8.42e-1821
regional part of cerebral cortex8.19e-1417
occipital lobe2.10e-1210
visual cortex2.10e-1210
neocortex2.10e-1210
basal ganglion5.64e-088
nuclear complex of neuraxis5.64e-088
aggregate regional part of brain5.64e-088
collection of basal ganglia5.64e-088
cerebral subcortex5.64e-088
tube7.47e-07114
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:77857731..77857793,-&oldid=4294891"